Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              <------NtERF2                                                                                             <-------                                                             ----------->GT1      <---------ZAT2 <---                                                            <------ZmHOX2a(1)     --------->ZAT2-----                                                      <------NtERF2               --------->At4g35610                                                     ------>NtERF2                <---------At4g35610                                                     <-----------HVH21         <---------At4g35610  -                                                    <---------DEAR3(1)        --------->ANAC58-------                                                    --------->DEAR3(1)        --------->ANAC58-------                                                    <---------ANAC46       <---------SPL7    <-------                     --------->ANAC46             ------>NtERF2           <---------ANAC46   <-------                   <-----------GT1                --------->LBD16       ------>NtERF2       <--------               <----------DOF2   ------->TEIL    <---------RAP2.6(2)    --------->LBD16     <-------- ---->DOF2  <---------ARR11(3)  <---------ALFIN1 <---------LBD16       <---------DEAR3(1)  <---------At4g35610 -->YAB1    --------->ARR11(3)--------->ANAC58  <---------LBD16        --------->ANAC46    --------->At4g35610 --ATHB12<-----------GT1      --------->ANAC58<---------ARR14(2)      <---------LBD16--------->At4g35610   aggggcgattttgacatctttataccccatggaagcaccttgatcaagtttccggcgtcgaaggagtaattctccggcgtaagcagctgctacagcggcg  1146300    --------->AtMYB61 -------->ANAC58                           ------->GAMYB ----ANAC46                                --------->AtMYB61 ----DEAR3(1)                             <---------MYB55(2) --->ATERF1(2)                            --------->MYB46(3) ----ATERF1(2)                           --------->ANAC58 -->ATERF1(1)                 <---------At4g35610 --RAP2.3(1)                  --------->At4g35610 ---NtERF2                 <------ZmHOX2a(2)   --------->TOE2(3) ->NtERF2                 --------->ARR11(3) ------>MYB83 -------->ANAC58          <---------ARR11(3)----------->RAV1(1) -->At4g35610            --------->GLK1(1)<---------MYB52(2) -->RAP2.3(1)          <------ZmHOX2a(1) --------->ANAC58 --DEAR4(2)         ==============HOX2a_HOX2a------>MYB46(1) --ATERF1(1)        <------ZmHOX2a(1)    --------->ANAC46                          ------------------ -RAP2.3(2)     --------->TOE1(2)    <-----------GT1                         ---------->DOF2 -DEAR3(1)    --------->GLK1(2)    <---------WOX13(1)              --------------->AGL15   gcaagaccaccaagagaagctaggaggagatcaactgatttacaaccaacattagagacatctcttgttccttctatagcaaagaaatcaacaaaactca  1146400                                                          <---------ANAC55(2)                                                          --------->ANAC55(2)                                                       --------->ARR14(2)                                            <---------AHL20(2)                    <---------WRKY12                            --------->AHL20(2)<---------YAB1                  <---------ZAT6      <--                      ----------->GT1      --------->AHL20(2)   <-----------RAV1(1)             <----                    ---------->DOF2        --------->ICU4<-------TEIL<---------ANAC46          ------ ------>ANAC81----------->GT1         --------->YAB1   <---------ARR14(2) <---------ZAT14      ------   ataagagagagagagagagagaaaaagaaataaaaaacaatagtatttattatttcaaatacgtttttgttgtttgtttactggtaaacgaagagagaga  1146500      <------ZmHOX2a(1) -----TEIL -------------------TaNAC69(2) <-----------GT1   ---------->DOF2                       --------->ANAC58 --->CCA1(2)           --------->MYB52(1)  <<<<<<<<<<MYB80        <------ZmHOX2a(1)    --------->ANAC58 --->At4g35610        ------>ZmHOX2a(1)<----------DOF2 <----------DOF2               <--------P     -   tgcagagaggaagaccattacctcctaagggtttcaccattctttggtttgaaaagtctttttgggaaggagattgagactgcgagggtaagcactaact  1146600                                                                   <---------GLK1(1)                                                                   --------->GLK1(1)                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                                 <---------HSFB2a(1)         --------->ATHB12                                        --------->HSFB2a(1)                <   ----------->RAV1(1)                                    <---------ANAC46                         --  --------->ANAC46            <----------DOF2             <---------ANAC58                      <---- -------->ANAC46           <-----------GT1           *TSS <---------ANAC58         ------->TEIL -----   caacacaacattgatttctagtttggatttttcttttctcatctaatatgtctgaatttttcttggaagatttctcttaagaatgcatctagtgggattt  1146700                                                                                      --------->YAB1                                                                                      <---------ICU4                                                                                      -------->HAHB4                                                                                     --------->ICU4                                               <---------AHL20(2)                    <---------ATHB12           <---------AHL20(2)                <---------YAB1                       <---------AHL20(2)          --------->AHL20(2)                --------->AHL20(2)             ----------->GT1        ---         <---------YAB1                  <---------AHL20(2)             <---------ANAC46   <---------ANAC58   --------->ICU4                        --------->AHL20(2)             <---------bZIP60(2)<---------ANAC58  <---------TOE2(3)                      --------->YAB1            <---------AtLEC2 <---------TOE2(3) ---------AHL20(2)                  --------->ARR11(3)             --------->YAB1--------->AHL20(2) ------->AHL20(2)        <---------STY1(2)<---------YAB1         --------->AtLEC2<---------AHL20(2) -----AHL20(2)           --------->STY1(2)<---------TOE2(3)      <---------YAB1  --------->AHL20(1) ---->AHL20(2)<---------------AtSPL8<---------ARR11(3)       --------->ARR11(3)  <---------AHL20(1)   atttaatgtttattatatagtactactagctactactagatattaatattatatgaaatttgatatcatgcatgatgtggtaatttaatgatgacttgac  1146800             <---------MYB46(3)             <------MYB83             <------MYB46(1)            --------->ALFIN1            <---------AtMYB61          <---------ANAC46          <---------ANAC58          <---------ANAC58      <---------ARR14(2)   <---------ANAC58                                                --------->YAB1   <---------ANAC46                  <---------ICU4--------->AHL20(2)                              --   <---------ANAC58           <---------WOX13(1)   <---------AHL20(2)                           -----  <---------LBD16           --------->ATHB12      --------->AHL20(2)    ----------->GT1       <------ ------>ATHB12             <---------YAB1   ----------->GT1  <<<<<<<<<GATA-1                 --------   ttattgcggatggggtggtttttcaaagtatgattgccaaaatgactagtgatttaattgtttatctatgcataatgtaattcatcgtctaatagataca  1146900                                                                                       --------->TOE2(2)                                             <-----------ARR10                        --------->At4g35610                           ---------->DOF2   <---------ARR11(3)                       <---------At4g35610                        <------ZmHOX2a(2)    --------->ARR11(3)                       --------->ZAT2     --------->TOE2(3) --------->ARR11(3)   <---------CCA1(2)                         ----------->RAV1(2) ------->YAB1          <---------ARR11(3)------>MYB46(1)                         --------->ANAC46 ------>GT1        ---------->DOF2       ------>MYB83                            <---------bZIP60(1) -TEIL      --------->MYB52(1)          ----------->RAV1(1)             --------->MYB52(1) <--------- ->CCA1(2)<---------MYB52(2)          --------->MYB46(3)     <----------DOF2     --------->bZIP60(1)   gtaataacataaactaacaaaaaaagatcaaaagtatgaaaccaacatatctcaactaatattctttttcgacaaaactgatcacatcacctgcgtcatt  1147000                                                               <---------AHL20(1)                                                              <---------CCA1(2)                                                       --------->ALFIN1                                                     <-----------RAV1(1)                            <----------DOF2   --------->ARR14(2)                       <----------DOF2        <---------ARR14(2)<---------AHL20(2)                 <- <----------DOF2       <---------DAG2    <-----------HVH21<---------ANAC46            ---------->DOF2 --TGA1               <---------DAG2 ---------->DOF2 --------->ALFIN1    ---------->DOF2  ---------->DOF2   ttcctttgttcagtattctattccccttttcttttgaatcaaaggtcatatactcgtgtggctcatatatttgataaaagtttaagaagaaagaaaggga  1147100                                                                                   <---------YAB1                                                                                <---------YAB1                <-------TEIL                                               <---------AHL20(2)           --------->AHL20(2)                                              --------->AHL20(2)       --------->YAB1                                                 --------->ICU4  <---------TOE2(3)      <---------YAB1                                   --------->AHL20(2) --------->AHL20(2)   <---------YAB1                                   --------->YAB1 --------->ZAT6  <---------WOX13(1) --------ARR14(2)     ------->TEIL           ---------->DOF2<-------TEIL  <---------AHL20(2)   gtattttgatgataaaaatacatgaattttggttcaaataagagctacaaagtttgataatatacatgaacactgattaaatttgattaatgaattcatg  1147200  Previous    Next  AGI:  At1g04280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06750.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71304.1); contains domain SSF52540 (SSF52540); contains domain G3DSA:3.40.50.300 (G3DSA:3.40.50.300) Range:  from: 1143435    to: 1146653    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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