Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <------MYB46(1) --------->ARR14(2)         ----------->GT1 ------->TEIL         ----------------------->TaNAC69(2)         <------MYB83   <---------CCA1(2)         <---------MYB46(3)       --------->CCA1(2)        <---------AtMYB61<---------ARR14(2)                                    <---------ANAC55(2)       <--------P     <---------ANAC55(2)                            <---------AHL20(2)      <-------GAMYB   --------->ANAC55(2)                            --------->AHL20(2) -------->DOF2        --------->ANAC46                       <------MYB83--------->AHL20(2) --->ARR11(3)         --------->ANAC55(1)                    <------MYB46(1)   --------->ANAC55(2) ----ARR11(3)       <-----------GT1<-------TEIL        ---------->DOF2   <---------AHL20(2)   ctaaagagggttggtttatattatacgtatcccaagattcaagtatatgtagagaataaaagttggtctaaaaaaataaatacttgattcactcgtactt  1125100                                           <---------ARR14(2)                                       <-------TEIL                                    <---------ANAC46                                    <------MYB83                                    <---------ANAC58                                    <---------ANAC58                                   <---------------AtSPL8                                   <---------------AtSPL3               ----------->GT1     <------MYB46(1)                               <---------ATHB12          --------->AHL20(2)       <------MYB83                         --------->ANAC58          <---------AHL20(2)       <---------MYB46(3)             <---------------AGL15         --------->YAB1            --------->MYB59         <---------YAB1    --------->MYB46(3)        ==========================================================================MADS_MADS        <---------------AGL15    <--------P--------->ARR14(2)     ===================================     --------->AHL20(2)          <<<<<<<<<MYB98          --------->YAB1 --------->ANAC58           <-     <---------AHL20(2)         <-------GAMYB --------->ANAC46  --------->At4g35610    <----------ID1    --------->AHL20(2)<---------ICU4<------MYB46(1)<------ZmHOX2a(2)    --------->ANAC46        <----   ggataaatttataaaaatagttactcagtacttgggttgggtacatatacgagatcgaatggtgatagctaaacaaggaacaaatgaatagaacaagtgt  1125200                                                                                                   --                                                                      ------->TEIL          ---------                                         --------->DAG2              <---------AtLEC2      <---------GLK1(2)                                     --------->ANAC58               <-------TEIL      --------->TOE2(3)                                     --------->ANAC58          --------->AHL20(2)    --------->MYB46(3)         <---------ATHB12  <---------ANAC55(2)                 <---------AHL20(2)   -------->P     --        --------->GLK1(2)  --------->ANAC55(2)   --------------->AtSPL8            ------->GAMYB  --- ======================================================================MADS_MADS  --------->MYB46(3) --------YAB1              ----------->GT1       <---------------AtSPL8   ------->TEIL------->GAMYB-- -----YAB1              <---------ATHB12---------->DOF2--------------->AGL15    --------->YAB1-------   gattaatgcgaatcaagcgtatagaaatcatgtaacaacaagaaaagttgaatagtactacatatataaatgcatgtagctataacaaccacaaattctg  1125300             <---------ARR11(3)        --------->YAB1     --------->YAB1     <---------ICU4    --------->ICU4    <---------ATHB12                                                                        <-------- ------->ANAC46                                                                             --------- >GLK1(2)    --------->GLK1(2)   <---------AtLEC2                 <---------AHL20(2)    <---------AHL20(2) ------->ANAC58           <---------YAB1                       <---------ARR11(3)   <---------YAB1 ---->TEIL   --------->ARR11(3)<-----------GT1          <---------ANAC46     <---------MYB52(1)------ ------->ANAC58        --------->TOE2(2)               ---------->ID1<---------YAB1 --------->ICU4 -------->AtSPL8     <---------TOE2(3)        --------->YAB1   <---------GLK1(2)  --------->YAB1   <-   tacccaataatcaaaaatctattaacatatgatttacatgtctaacaatgttgatttttcgtctagattttatgctaccgtttatcatgtttaataaaga  1125400        <---------MYB52(1)      <---------ANAC46      <---------bZIP60(2)      <---------ANAC58   ----------->TGA1                                                                 <---------TOE1(3)   ----------->HVH21                      <-------GAMYB  ------------>CBF           <---------TOE2(3) <---------ICU4  ---------->DOF2         <-----------RAV1(1)            --------->ANAC58 -ICU4<---------ANAC58                   <---------MYB46(3)        <---------YAB1  <-----------GT1 ->DOF2 --------->ALFIN1    ----------->GT1             <-----------GT1 --------->ANAC58          --- ------>MYB.PH3(1)          <---------TOE2(3)  ---------->DOF2 <---------AHL20(2) <-----------GT1 --- ------GAMYB  <----------DOF2      ---------->DOF2<---------At4g35610   --------->ANAC46          ---   cagttatgacgttgggctttaaagcctattaagaaaaaaaagtctgttggaaagctgtttacaatttttatgaaacgcaacgttttaacgtttgtgagaa  1125500                                                                                      --------->CCA1(2)                                                                                      <----------TaMYB80                                                                                      <---------GLK1(1)                                                                                      --------->GLK1(1)                                                                                     <---------ARR14(2)                                                                                     ---------->TaMYB80                                                                                     --------->ARR14(2)                                                                                   <---------MYB46(3)                                                                                  <---------ANAC46                                                                                 <---------LBD16                                                                               --------->ANAC58                                                                               --------->ANAC58                                                                               <---------DEAR3(1)                                                                               --------->ANAC46                                                                              --------->SPL7                                                                             <---------ALFIN1                                         <---------ZAT18  <---------ICU4    <---------SPL7                                         --------->ZAT18  --------->YAB1    --------->ZAT18                                         --------->ZAT14 <---------YAB1    <---------ANAC58                                         <---------ZAT14 --------->ICU4    <---------ANAC46        <---------HSFB2a(2)       <------MYB46(1)   <------MYB83           <---------ANAC58        --------->HSFB2a(2)       <------MYB83     <---------AtMYB61    --------->ALFIN1  <------NtERF2               <---------MYB46(3)   --------->MYB59      <---------DEAR3(1)        --- ------>ANAC46                <-----------RAV1(1)<---------MYB52(1)    --------->ATERF1(1)     <----- ------>ANAC58     <-----------GT1<---------MYB46(3)<------MYB46(1)  <---------DEAR3(1)        <----- ------>ANAC58   *TSS      <----------DOF2 <---------REM1(2)      <---------DEAR3(1)<------NtERF2<---   acgcagcgttttagaaacttaaaacctgtcttttgttggtgactgcacacggtttggtcatcatcacttcggcgatggcgcacggcggatatgcgaggcg  1125600                                                         --------->REM1(2)                                                        --------->ALFIN1                                                       ------->MYC3                                                       <-------PIF5                                                       <-------MYC2                                                       <-------MYC3                                                       ------->MYC2                          <------ZmHOX2a(1)           <---------ANAC46                          =====================HOX2a_HOX2a ----------->GT1                      <------NtERF2                 <---------ANAC58                     ------>NtERF2                  <---------ANAC58         --------->At4g35610                   <------ZmHOX2a(1) -------->ARR10     <---------DEAR3(1)  <------ZmHOX2a(2)----------->GT1       ------>ZmHOX2a(1) ----DEAR3(1)       --------->ANAC46<------NtERF2   <---------ANAC46      <---------GLK1(1) ----ANAC46        --------->RAP2.6(3)  ==============HOX2a_HOX2a--------->MYB52(1) ---NtERF2        <---------ATERF1(1) --------->GLK1(1)------->PIF5       --------->GLK1(1)     <----   gagagttgcagagcggaagacgacggcaggaactagtcggagatcgaaaggattgcgcgtggagaaaaaaccgaagaattcctctctcaagaatcaaatt  1125700                                                            --------->REM1(2)                                                         <---------ANAC58                ----------->GT1                                                         <---------ANAC46               <---------WOX13(1)                       ----------->GT1                   <---------ANAC58             <<<<<<<<<RAP2.2                      --------->DAG2            --------->ANAC46                 <----------DOF2                     ---------->DOF2            --------->ANAC58             --------->LBD16              --------->ATHB12                  --------->ANAC58             ------>NtERF2             <---------YAB1 <---------MYB111(1)<---------TOE1(2)           <---------LBD16            <---------TOE1(2)                 ------>ZmHOX2a(1)      <-----------------AGL1       <-----------HVH21  <-----------GT1    --------->TOE1(2)     <-----------GT1   <---------TOE2(3) ---TEIL    <---------TOE2(2)                --------->TOE2(2)  <---------ZAT6------>NtERF2        <-   cgttccatcggtcgcatgattcgtaaagtaactactcttcttctcttcctacgaaattagcgtttagagttaccttctccggccttttagattgaaaatt  1125800                                                                      <---------ARR11(3)                                                                --------->YAB1                                                               <---------YAB1                                                              <---------AHL20(2)                                                              --------->AHL20(2)            <------MYB46(1)                                  --------->YAB1            <------MYB83                   <------ZmHOX2a(1)<---------YAB1                          <           --------->MYB59                 ===================================HOX2a_HOX2a          <-      ---------->DOF2                    <---------TOE2(3)--------->YAB1                     <-------     --------->YAB1                 <----------DOF2      --------->ICU4            <-----------GT1 --    <---------ATHB12             --------->ARR11(3)      <---------YAB1<------ZmHOX2a(2) <---------ANAC58 <---------------AGL15           <---------ARR11(3)  <---------ANAC58 --------->ARR11(3) <---------ANAC58 --------At4g35610              <---------CCA1(2)    <---------ANAC58<------ZmHOX2a(1)   <---------ANAC46   tagctaatcaaagtaggtttcagtgttttctcttaaatcttttgaggaatttgtttcttatgattataataggatcatggtcgattaacttgcttatgag  1125900                                                                                                   --                                                                                                  ---                                                                                             ========                                                                                             ------>ZmHOX2a(2)                                                                                            =========                                                                                            <--------                                                                                            ---------                                                                                            =========                                                                                            <------ZmHOX2a(2)               --------->HSFC1(1)                                                          <---------ARR14(3)               <---------HSFB2a(2)                                                         --------->ARR14(3)               --------->HSFB2a(2)                                                         --------->ARR14(2)               <---------HSFC1(1)                                                          <---------   <---------YAB1                                                                          <---------ARR14(2) ------ZmHOX2a(2)               <---------AHL20(2)                                         <---------ARR11(3) --------ARR11(3)  --------->ANAC58                    <---------TOE2(3)                   --------->ARR11(3) --YAB1  --------->ATHB12     <----------DOF2    ------->TEIL                             <------ZmHOX2a(1) ------->ARR11(3)  --------->ANAC58         --------->CCA1(2)  ------->TEIL             <---------TOE1(2)   agatcatgaattgatttcgagaagcaatatgtctttaatggagaagagatgaattttgatgtatgaatatgtacaaatgcaattgtctcttaggatcttc  1126000  Previous    Next  AGI:  At1g04230.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G43720.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74699.1); contains domain PD033977 (PD033977) Range:  from: 1125517    to: 1128167    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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