Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->SPL7                                                 <---------SPL7           ---------->DOF2                                                 <-----------HVH21     --------->YAB1                                               --------->LBD16   --------->ANAC58                 --------->ANAC55(2)          <---------ANAC58   ----------->GT1         <XXXXXXXXXXX       <---------AHL20(2)   <----------ID1    <---------ANAC58   --------->ANAC58       <XXXXXXXXXXXX <---------WOX13(1)     <---------GLK1(1)    <---------LBD16 --------->ANAC58           ----------->GT1 -------AHL20(2) <---------ANAC55(2)       <-----------GT1   --------->ANAC58  ---------->DOF2  <----   ataattgattttttttgttatgtaagaaatcggacaaaattagtttttccgcgtccgaaatacaagctcgtaataacaaagaaaagacaggggtaatttg  1086100                                                          --------->AHL20(1)                                                          <---------AHL20(1)                                                          --------->ARR11(3)                                                         <---------AHL20(2)                                                        --------->ICU4                                                     --------->AHL20(2)                                                   ----------->GT1                                                  <---------TOE2(3)                                                 ---------->DOF2                            <------MYB83             <---------ICU4                     --------->AHL20(2)                          <------MYB46(1)            --------->ICU4                  <---------YAB1<---------ARR11(3)            <---------ANAC46          --------->YAB1                    <---------AHL20(2)                         <------NtERF2         <---------YAB1                    --------->AHL20(2)                         <---------MYB46(3) XXXXXXXXXMIR398A                          <---------AHL20(2)                        --------->ALFIN1 XXXXXXXXMIR398B/C             --------->YAB1   <---------AHL20(2)                --------->DAG2 -----LBD16 <---------YAB1    <---------YAB1--------->AHL20(2)                  ---------->DOF2------   gggatgtaattgtcataattcaacgtctacttatgatgctgtcattttaattaaagtaaatattttctccaaaaacaaatcccaaaggtgggggaggtaa  1086200                --------->ANAC58                --------->ANAC58          --------->YAB1            --------->ANAC58            <-----------TBP                       --------->At4g35610            --------->ANAC46       <---------DAG2                           --------->YAB1            --------->ANAC58       <----------DOF2                       --------->WOX13(1)        --------->ANAC58     --------->ANAC58                           --------->MYB46(3)        <--        --------->ANAC58     --------->ANAC46                 ----------->RAV1(1)                 --- --->MYB52(1) ---------->DOF2--------->ANAC58 --------->GLK1(2)        ------------>CBF    <---------   gggaagagggaagcacgaaagccaaaataaaacgaaacttttttttataatctgagaaagtttgcgacattacaacaatcagaagaatcaacgcgtttcg  1086300                                                                                 <---------DEAR3(2)                                                                     <---------DEAR3(2)                                                                    <---------At1g77200                                                                    <---------DREB2C(2)                                                                    <---------DEAR3(1)                                                                    --------->ETT(1)                                                                    <---------DEAR4(1)<------------CBF                                         <---------ANAC46      <------------CBF <---------At1g77200                                         <---------ANAC58   --------->ANAC58    <---------DEAR3(1)                                         <---------ANAC58   --------->ANAC55(2) --------->ETT(1)            <---------DAG2      <---------ARR14(2)          --------->ANAC58    <---------DEAR4(1) -------ARR14(2)                ------->TEIL                --------->ANAC46    <---------DREB2C(2) ------>ARR14(2)                --------->ARR14(2)       --------->ARR14(2)    <---------ORA47(1) -DOF2      <----------DOF2<------------CBF              <---------ARR14(2)  <-----------RAV1(1)  ---   gttttgctaattccctttatttttctgggcattgaatctggtttcttgaagcattctcgtatacgcattgtcggtgtatttgtcggtgtattggaaggct  1086400                                                    --------->ANAC58                                                    --------->ANAC58                             <---                                                 <---------KAN4(2)                             ------                                            --------->LBD16                                 ---------                                         <------ZmHOX2a(2)                               <---------ICU4                                        --------->AGP1                                   <--------ATHB1                                        <---------ARR14(2)                               --------->YAB1                                        --------->ARR14(2)                              --------->ICU4                                        --------->ARR11(3)                           <---------------AGL15               ------------>CBF    --------->At4g35610                              ------------>CBF    ---------->DOF2                <---------At4g35610                   <---------YAB1 <---------ATHB51 ------>MYB52(2)   <-----------RAV1(1)  <---------ARR11(3)     <------------CBF--------->TOE2(3) <---   tagttacaaagaagaagttcaatgttgctctgatttcagctagatccagagaataagcaaaataacattgagtttcttattcgttaaacaataatggtaa  1086500                                                <---------AHL20(2)                                                --------->AHL20(2)      <---------WOX13(1)                                         <---------WOX13(1)          <---------YAB1                                       --------->ATHB12              --------->ICU4                                      <---------YAB1               --------->YAB1    <----------DOF2                 <---------ANAC46       <---------ANAC58                    <----- ------TOE1(3)                      <---------ANAC58       <---------ANAC58                   <------ ---->DOF2 --------->YAB1           --------->ANAC55(2)    <---------ANAC46                   ------- >YAB1     --------->ATHB12         <---------ANAC58    <---------MYB52(1) <---------ARR14(2)<------- ------TOE2(3)                    <-----------GT1    <-------TEIL <---------YAB1          <---------YAB1   aggtttctttcattcatgggtttttcatgttttttttttcgtgattgcatttaaattcgtttcgttttatgatgatggatagggtttatgttttgattta  1086600                      <---------WOX13(1)          <---------bZIP60(1)          --------->bZIP60(1)       ----------->HVH21  ------->TEIL  ------>ZmHOX2a(1) --------->ATHB12                 <---------YAB1 ----AHL20(2)      <---------YAB1                    --------->ICU4 ---AHL20(2) <---------ANAC46                      --------->YAB1                  <---------AHL20(2) -->AHL20(2) <---------ANAC58                  --------->ATHB12               <---------YAB1  <------ --WOX13(1)  <---------ANAC58         <---------YAB1<---------TOE2(3)     <-------GAMYB  <-----------GT1   tttcctcgtgtgatgtcgtttttgattgaatctgagttttgtaattgagtcattgatgatgagttttgagtttggcgattgtgattttttttttcaatct  1086700                                                                                   <---------ANAC58                                                                               <---------ANAC58                                                                               <------MYB83                                                                               <------MYB46(1)                                                                               <---------ANAC58                                     ----------->RAV1(1)            ----------->HVH21      ------>ZmHOX2a(1)                                    ----------->HVH21         --------->ANAC55(2)  <---------ANAC58                                    --------->ANAC58          <---------ANAC58--------->MYB59                                    --------->ANAC46          <---------TGA1a --------->MYB46(2)        <---------ANAC58  <---------ANAC58                    <---------O2    --------->MYB111(2)        <---------ANAC58  <---------ANAC58                    --------->TGA1a <---------AtMYB61 <---- <---------At4g35610   <---------MYB52(1)    --------->CCA1(2)<---------ANAC58<---------MYB46(3)<---- --------->At4g35610<------NtERF2   --------->ANAC58          --------->O2    --------->MYB111(1) ---ATHB12 <-----------HVH21       --------->SPL7             <---------bZIP60(2) <---------MYB46(3)   ttgagctgtttcgagtcatggcatcgttgagtccctgtacgacagagatttgacttcaattcagacgtgtctgatagagtttggtgcttagtcctataac  1086800                                          <------MYB83                                          <------MYB46(1)                                         <---------------AtSPL8                                         --------->MYB59                                        <--------P                                      --------->ALFIN1                                    <---------ANAC58                                    <---------O2                                    <---------ANAC58                                    --------->TGA1a                                    <---------TGA1a                                    ===============================================bZIP_DOF                                    =============MYC_MYB                                    --------->O2        <---------------AGL15       <---------ANAC55(1)                       <---------RAP2.6(3)        --------------->AGL15       <---------ANAC46                         --------->RAP2.6(2)        ==========================MADS_MADS                             ---------->DOF2    <---------GLK1(2)    <---------MYB46(3)  <-------TEIL           --------->TOE2(3) -----ANAC58      <---------------AGL15--------->REM1(2)            --------->TOE1(3) -----ANAC58    <---------At4g35610 <---------ANAC55(2)          <-----------GT1  --------->GLK1(2)--   ttgtctgattctctatttagctactagtggttacagagacgtgtaggtacattgctacggtttcaaattaccttaaaagccgaaattctatatgctattt  1086900                                                            ---------->ID1                                                           <-------GAMYB               <---------ANAC58  --------->GLK1(1)        <---------MYB46(3)    ---------->DOF2 <---------WOX13(1)            <----------DOF2              --------->ALFIN1 --------->TOE2(3)--------->ATHB12  <-------TEIL--------->HSFC1(2)           <---------ANAC58 <---------MYB59 <---------YAB1  --------->At4g35610      --------->MYB52(2) <---------ANAC58  <----- ----->TEIL    <---------ANAC58<------ZmHOX2a(1)<---------HSFC1(2)----------->GT1            <-------   gaacctaaatgcaagtttcttgattgcacattaggagatgcaatcttcgaagctttgagtttgttgtaatgttatttgagcgtgaggctacgttctgctt  1087000  Previous    Next  AGI:  At1g04160.1    Description:  XIB (Myosin-like protein XIB). similar to XIG (Myosin-like protein XIG), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT2G20290.1); similar to MYA2 (ARABIDOPSIS MYOSIN) [Arabidopsis thaliana] (TAIR:AT5G43900.1); similar to XIH (Myosin-like protein XIH) [Arabidopsis thaliana] (TAIR:AT4G28710.1); similar to myosin subfamily XI heavy chain [Petroselinum crispum] (GB:AAK21311.1); similar to myosin XI-2 [Nicotiana benthamiana] (GB:ABJ53197.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40520.1); contains InterPro domain Myosin, N-terminal, SH3-like; (InterPro:IPR004009); contains InterPro domain IQ calmodulin-binding region Range:  from: 1086494    to: 1096145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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