Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           ------>MYB83                                                         <---------ICU4--------->AtMYB61                                                        <---------ATHB51 ------>MYB46(1)            ---------->DOF2                             <---------YAB1 <---------MYB59         <-----------HVH21  --------->ANAC58           <---------MYB52(1)--------->MYB52(1)         --------->TOE2(3)  --------->ANAC58      --------->ANAC58  <---------WRKY18(1)            --      --------->ARR14(2)    --------->ANAC46      --------->ANAC46 --------->WRKY38(1)             <-    <---------MYB52(1)  <-----------HVH21     --------->ANAC58     --------->WRKY12                <-   --------->LBD16     <----------DOF2        --------->ANAC58   <---------ANAC58                  -- <---------LBD16    <------ZmHOX2a(1)        --------->WOX13(1)  <---------ANAC58               ----- -------GLK1(1) --------->TOE1(2)<---------ALFIN1 --------->ANAC58 ----------->HVH21          <------   cattccggtatcgtcaaagctaggactttcaggccaaactccagtatcaagcacgccgataattgtgccttgaccaaaccgagatttagaccatacaccg  1063400    <---------HSFB2a(2)                                                                       <------    --------->HSFB2a(2)                                                                       <------   ----------------->AG                                                                       -------   ========================================MADS_MADS                                   <---------At4g35610   ----------------->AGL1                                                              ----------->GT1 ------->HSFB2a(1)                                                           ====================RAV --------HSFC1(2)                                                 --------->At4g35610  --------->At4g35610 --------HSFB2a(1)         --------------->AGL15 ----------->RAV1(2)         ----------->RAV1(1) ------->HSFC1(2)       --------->ARR11(3)      ------->TEIL      <---------At4g35610<-----------RAV1(2) ---->LBD16             <---------ARR11(3) <---------ANAC46      --------->MYB59   <-----------HVH21 ---LBD16  <-----------HVH21             <---------MYB46(3)   <-----------HVH21--------->MYB46(3)   gagtttccaaaaccgtcgagtcccaagaacttgtaagagtaagtggtttgaacctgaagaacatggtcaggtctcactgcaacaacttcaggtgaatatc  1063500                                    <---------ARR14(2)                                    --------->ARR14(2)                                   --------->GLK1(1)                             --------->At4g35610  --------->ARR11(3)    --------->At4g35610  --------->ARR14(2)    <---------At4g35610  <---------ARR11(3)  <---------WRKY38(1)  <---------ARR14(2)  --------->ZAT14  <-----------ARR10   <---------WRKY12 -----ARR10<---------At4g35610     <---------GLK1(1)                    <---------HSFB2a(2) ---ARR11(3)          <---------ZAT14   ------>ZmHOX2a(1)               --------->HSFB2a(2)    <<<<<< -->ARR11(3) <---------YAB1  <---------At4g35610           <------ZmHOX2a(1)             ------>ZmHOX2a(1)   tcagtatctcggcttctgattcagtcaactgagcagcaaatccttcaatcgcagagccataggagtagagaagtcgagaagaaggctcttcctcttcttc  1063600                                                                                     ------->TEIL                                                  <---------TOE2(3)             <------ZmHOX2a(1)                 <---------ANAC46        --------->YAB1                      --------->YAB1               <----------DOF2        --------->WOX13(1)            --------->ARR14(2)<---------At4g35610  <---------ALFIN1           ---------->DOF2  <----------DOF2       <---------ARR14(2)--------->At4g35610 <<<TBF1---------->DOF2  ---------->DOF2<---------ATHB12<---------TOE2(3) <----------DOF2   ttcaacacctaaaaccgcttcttggagaaaagaaagatgccaatcaaactttgaggcaaaggttttagcggtttcgctattaggatgaagctgaacaatg  1063700                    ----------->TGA1                    ----------->HVH21                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)                <---------GLK1(1)                --------->GLK1(1)               --------->ARR11(3)               <---------ARR14(2)               <---------ARR11(3)               --------->ARR14(2)                          ---------->DOF2                      -----               <---------AGP1 <----------ID1      ---------->DOF2                      ----------->GT1              <---------GLK1(2)                 <---------ARR11(3)      <---------ANAC58       ------              <------ZmHOX2a(1)                 --------->ARR11(3)      <---------ANAC58----------->GT1    <---------At4g35610     >>>>>>>>>TBF1      --------->YAB1       --------->ALFIN1   <---------ZAT6   taagtctgcttctgcaggatctctgacgaagaagaacaaaatagaagaaagataatgcagagaaagaaaggtttgggttccattggagagagttaaaaaa  1063800         <---------ANAC46    <------MYB83                                                                         --------->ARR14(2)    <------MYB46(1)     <---------AtLEC2                  ---------->DOF2                <---------ARR14(2)   <---------AtMYB61   <-------TEIL                      --------->AHL20(2)         <---------LBD16  <--------P<---------ZAT18                        ----------->GT1                  --------->TOE2(2) ---->DAG2  --------->ZAT14                >>>>>>>>>TBF1 <---------AHL20(2)         --------->TOE1(2) ---->DOF2  <---------ZAT14             >>>>>>>>>TBF1  <-----------TBP             ----------->RAV1(2)   aggagttggtttagtgtagttgaagtgcatggttttagagaagaagaagaatagggtatttaaagaagaatgaagagaattcaaaacctgggatttggag  1063900                                                                             --------->HSFC1(2)                                                                             --------->HSFB2a(1)                                                                             <---------HSFB2a(1)                                                                             <---------HSFC1(2)                                                                           <------ZmHOX2a(1)                                                       ------>ZmHOX2a(1)  <------MYB83                 ------->TEIL                      <---------ARR14(2)     <------MYB46(1)              <---------REM1(1)                    --------->ARR14(2)    --------->MYB111(2)  <------   <------ZmHOX2a(1)                    ------>NtERF2 --------->TOE2(3) <--------P       <---------AHL20(2) <---------TOE2(3)      --------->REM1(2)  ----------->HVH21 <-----------RAV1(1)       <----------DOF2   tctaaggaagaagatgatgaagctcgtgaagagtaagagctctgcctcacgagtatcctttgtatgttgcagaggtaggagcttcttctcttttattttt  1064000                                                                                                    <                                                                                                    <                                                                                                 <---                                                                                          <----------DOF2                                                                                       <-----------GT1                                                                                       ---------->ID1                         <---------At4g35610                     <---------ANAC58     <-----------GT1                  <-----------GT1<---------TOE1(3)               <---------ANAC58 <------------------ ---AHL20(2)   --------->YAB1    <---------TOE2(3)   <----------DOF2      <------------------------ANAC81   ttctaagacatgaactatattaactgaagctgtttaaggtttttcacttgtaaggcttttttgtctgccttgtctctgtgtctctgtttttccttttttt  1064100                                  <---------ANAC46                                  <---------ANAC58                      <---------GLK1(2)                                  <---------ANAC58                      <---------ARR11(3)                            <---------AHL20(2)                    --------->MYB46(3)                        <------MYB83                            ----------->RAV1(1)     <------MYB46(1)                       --------->MYB59                        --------->At4g35610       <------MYB83                       <---------AtMYB61                      <---------At4g35610  --------->AHL20(2)                     <---------MYB52(1)                      --------->ANAC46     --------->AHL20(2)        --------->ANAC46<------MYB46(1)                <----------DOF2  --------->ARR11(3) ---------ANAC58  <---------YAB1  <---------ANAC55(2) --------------->AGL15       <---------AHL20(1) ---------ANAC58  <---------TOE1(3)                   <---------DAG2---------->DOF2<---------AHL20(2) --------GT1<---------ARR11(3)    <---------ANAC55(1) <---------------AGL15       --------->AHL20(1) ------ANAC81     <---------TOE2(3)                  ----------------->AGL3       <---------AHL20(2)   ttccttgttcacgagatgttatggttaggttttattgcgtatagtagtttgtgtagcctttttcagcaacaaaagattttgaaatttatttggtttccat  1064200                                                  --------->ATHB12                                                 <---------ATHB12                                                 --------->MYB46(3)                                           <---------ICU4              ---------->DOF2              --------->YAB1          ------>MYB46(1)                 --------->ICU4          ------>MYB83               --------->TOE2(3)          --------->ANAC58      --------->YAB1  -------->P             <---------AHL20(2)          --------->ANAC46     --------->ZAT6   <<<<<<<<<<<<<<<<<LFY   --------->AHL20(2)          --------->ANAC58   <-----------GT1   --------->WOX13(1)   ------->TEIL                    -     <-----------GT1   <-------TEIL<---------ARR11(3)        --------->AHL20(2)              --------   tgaagttttaccaagccaaagaaaattcatttaacaataacttaataatcaaccattggccaaatatatgtatttttttaaaaacatactattaaactta  1064300  Previous    Next  AGI:  At1g04110.1    Description:  SDD1 (STOMATAL DENSITY AND DISTRIBUTION); subtilase. similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT2G05920.1); similar to subtilase family protein [Arabidopsis thaliana] (TAIR:AT3G14240.1); similar to putative subtilisin serine protease of stomatal density and distribution [Isatis tinctoria] (GB:ABD64827.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40550.1); similar to subtilase family protein, putative [Oryza sativa (japonica cultivar-group)] (GB:ABF93923.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Peptidase S8 and S53, subtilisin, kexin, sedolisin; Range:  from: 1061456    to: 1063783    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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