Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->AHL20(2)                              --------->AHL20(1)    =========================================================================MADS_MADS    --------------->AGL15     <---------AHL20(2)   --------->At4g35610        <---------AHL20(1)   ----------->RAV1(2)       <---------AHL20(2)   <---------At4g35610       --------->YAB1                                                  <------- ----ICU4                   <---------YAB1                                                  <-------- -->ATHB1                 <---------ICU4                       <---------AHL20(2)           --------- --->ATHB51               <--------HAHB4                   --------->AHL20(2)             <------MYB46(1) ---ATHB1                --------->ICU4                    <---------AHL20(2)             <---------MYB46(3) --->ATHB12            --------->YAB1     <---------At4g35610  --------->AHL20(2)         <------MYB83 ---ATHB51      --------->DAG2--------->AHL20(2)       --------->ATHB12                  <---------AtMYB61 -->ICU4      ---------->DOF2--------->AHL20(2)       <---------ATHB12          <----------DOF2 ---YAB1 ---------->DOF2 <---------YAB1   --------->At4g35610<---------------AGL15    <-----------RAV1(1)   ttgacacctgaaaaagaaaaggctgtcataattatattatatacagctaaaaacaaatgatttatatatatagagagagagactttatatgttggtggtg  1024400                                                                                         --------->ZAT18                                                                                         <---------ZAT18                                                                                         --------->ZAT14                                                                                       <-------MYC3                                                                                       ------->MYC2                                                                                      <---------bZIP60(2)                                                                                      --------->TGA1a                                                                                      --------->O2                                                                                      <---------O2                                                                                      <---------TGA1a                                                                                      <---------ANAC58                                                                                      <---------ANAC55(2)                                                                                      <---------ANAC46                                                                                      --------->ANAC55(2)                                                                                      <---------ANAC55(1) --------->ARR11(3)                                                            <---------MYB52(1) --------->GLK1(2)                                                           <---------ANAC58 <---------ARR11(3)                                                          <---------ANAC58   ----- --------->ARR14(2)                         --------->ANAC55(1)              <---------ANAC46 ------- <---------ARR14(2)                        <-------MYC3                  --------->ZAT2<-------MYC2 --MYB46(3)                   ----------->GT1         ----------->GT1    <---------ZAT2------->MYC3 -AtMYB61        <---------AHL20(2)        ------->MYC3       ----------->RAV1(1)     <---------ANAC58 >ALFIN1   <----------DOF2 <---------bZIP60(1)    --------->ARR11(3)--------->SPL7<-----------HVH21   gaatatctgagagctttattttatcggtgatgtcgaaaatatacacatgtaacatattgtaatacaacagtacgatgctgcgtttgtcacgtgtactcct  1024500                                                        --------->ANAC58                                                        --------->ANAC58                                                        --------->ANAC55(1)                                                        --------->ANAC55(2)                                                        --------->ANAC46                                                        <---------ANAC55(2)                                                  <-------MYC2                                                  ------->MYC2                                                  ------->MYC3                                                  <-------MYC3            ----------->HVH21                    <---------TGA1a          <---------At4g35610    --------->ARR14(2)    <-------TEIL          --------->O2           <---------ARR14(2)----------->HVH21          --------->TGA1a     --------->ANAC55(1)--------->TGA1a                      --------->ANAC58          ----------->RAV1(2) --------->ANAC55(2)--------->ANAC58                     --------->ANAC58          <---------TGA1a     <---------ANAC55(2)<---------O2                     --------->ANAC58          <---------O2        --------->ANAC46   --------->O2                     --------->ANAC58          --------->At4g35610<-------TEIL        --------->ANAC58                 --------->RAP2.6(2)        <---------ALFIN1   --------->ARR14(2)    --------->ANAC46             <---------HSFB2a(2)      <---------ALFIN1     <---------ARR14(2)    <---------ANAC55(2)          --------->HSFB2a(2)  ------->TEIL     --------->ANAC58              --------->ANAC55(2)    <----------DOF2 ->ZmHOX2a(1)      --------->ANAC46              ==================================bZIP_DOF     ----- ---->RAV1(2)      --------->ANAC58       --------->ANAC46     <-----------RAV1(1)--------->ANAC46   gatgtatcccacacctgactcaagacacatatacgtattcgtatacatcacacgtgatacgtaatctgtggtctctttttccagacgcaaacaaacaaac  1024600                                                                                  ------->GAMYB                                                                                  --------->DEAR3(1)                                                                                 --------->ATERF1(1)                                                                               <---------ARR14(2)                                                                               --------->ARR14(2)                                                                    ----------->RAV1(1)                                                                    ------>MYB83<---------ATERF1(1)                                                                    ------>MYB46(1)                                                                   --------->ANAC46                                                                  <---------MYB59--------->MYB46(3)             <---------------AGL15                                --------->MYB46(3) <---------DAG2    --------->At4g35610         <----------DOF2                  --------->ANAC46--------->DEAR3(2)  <---------ICU4        ------------>CBF                   <---------YAB1     <------ZmHOX2a(1)  --------->YAB1  ---------->DOF2                      <----------DOF2      <---------TOE2(3)    ---- ---->YAB1   --------------->AGL15                  ------>ZmHOX2a(1) <---------ALFIN1      <--------   ataatcatctcaaaactcaaaaaagaaacaatctctttcaagtttgttttagtccttctttctgattacccaacacttaaggaaccgccttacactttcc  1024700                                                          <---------TOE1(2)                                                         <---------AtLEC2                                                  <---------ARR11(3)                                                  --------->ARR11(3)         ----------->GT1 ----->ANAC46             ----------->GT1         <-----------ARR10<---------AHL20(2)            ---- --DOF2                 ---------->DOF2       ---------->DOF2    ----------->TBP   ---------->DOF2   cacaacaagttttgcagagaaaatcgaaaagaaaaatgctcaaaccctagaagctcttcgcatgtctatatatatgtttgtgtaaaaaagaactaagcgt  1024800                                                                                               ------                                                 <------ZmHOX2a(1)                             <-----           ---------->DOF2      --------->At4g35610 <------ZmHOX2a(1)                        <-------         <---------TOE2(3)   ---------->DOF2    <------MYB46(1)                              <-------         <---------YAB1   <---------MYB59       <------MYB83                    <----------DOF2------   <------ZmHOX2a(1)   <------ZmHOX2a(1)       --------->MYB111(2)              <---------MYB52(1) ------>DOF2       ---------->DOF2            <--------P                 <------ZmHOX2a(1)   <-------   aaagaggaattaagaaagagagaaaggacctaaaagctgagagagatggtaggaggaagaagattagggaagagaggaagccctttgttgagatggagtg  1024900      ---------->DOF2    --------->ANAC58              ----------->HVH21    --------->ANAC58           <-----------ARR10 --->ALFIN1                    --------->GLK1(2)                               ------>ZmHOX2a(1) ----ZAT6                      <---------ARR11(3)                            ----------->RAV1(2) --ANAC58                      --------->ARR14(2)                           ------>NtERF2          -- --ANAC46             <---------GLK1(2)                               --------->YAB1              <-- ----->GT1            --------->ARR14(2)     <---------ARR11(3) --------->ANAC58             -------- --ANAC58             <---------ARR14(2)    --------->ZAT2      --------->ANAC58             --------   tgaaacaagaaagcttcagccatggattctcaaaatctgacctccaagctctctcttccatttgcgacgctattatgcctcctgttccattagagagctt  1025000      --------->At4g35610      <---------At4g35610 ------->ARR11(3)        --------->ANAC46                                                <---------TOE2(3) -------CCA1(2)         <---------LBD16  <---------CCA1(2)      <---------At4g35610  --------->At4g35610 --->GT1         <---------TOE2(3)<---------ZAT18               ----------->RAV1(2)<-----------RAV1(2) ->At4g35610     <---------TOE1(3)--------->ZAT14            <<<<<<<<<TBF1<---------TOE1(2) <--------P   aaatcttgagatgaagttgaaggttttgcgcaacgatgcactcttatctttcttcaagtcttcttcttctgagtctcatgttcgaccagatgaggttgtt  1025100                                                     -------->HAHB4                                                     <---------ICU4                                                 <---------AHL20(2)                                                 --------->AHL20(2)                                                <---------YAB1                                                --------->ICU4                                             <---------YAB1                                             <---------AHL20(2)                                             --------->AHL20(2)  --------->TOE2(3)                                            --------->AHL20(1)   <----------DOF2                                            --------->AHL20(2)--------->GLK1(2)                                            <---------AHL20(1)<---------ARR11(3)              <------                                       <---------YAB1--------->YAB1             ----------->GT1                  --------->At4g35610--------->YAB1 <---------YAB1             <---------TOE1(3)                --------->YAB1      <---------YAB1--------->YAB1<---------ICU4 <---------TOE2(3)       <----------DOF2    ---------->DOF2 ------->TEIL    --------->YAB1 ------->TEIL         -------   tatctccaactttctctatcatctcagtaaaagacactattatgaatataattaataatagcataatctttaatgaaccctaaggtatatagagtgatga  1025200                                                 <---------ANAC58                                                 <---------ANAC58                                                 --------->ANAC55(2)                                                 <---------ANAC55(1)      --------->ATHB12                                    --------->AHL20(2)               <---------AHL20(2)                  <---------MYB52(1)<---------AHL20(2)               <---------AHL20(1)                  --------->DOF5.7(2)<---------AHL20(2)              --------->AHL20(1)       <------NtERF2                 --------->TOE2(3)  --------->AHL20(1)            --------->YAB1           <------NtERF2                --------->ANAC46    <---------AHL20(1)         ----------->GT1           --------->ALFIN1     <---------ARR11(3)      --------->ZAT14     <---------ANAC55(2) --------->AHL20(2)--------->ZAT2     --------->ARR11(3)      <---------ZAT18     <---------ANAC46<---------YAB1        --------->At4g35610   <---------TOE2(3)<---------ARR11(3) <---------YAB1          --------->YAB1          <---------O2 ---YAB1   --------->ZAT6    <---------ZAT14 <---------ANAC58 --------->ICU4         <-----------RAV1(2) ---->GT1<-----------GT1     --------->ZAT18 <---------ANAC58 ----------->GT1--------->AHL20(2)   aaatttagattttactctacgttatcttcagtgcacaatttattagtgcttacgtgcaattggaatgataataaattgattaaaaaatcaggtggcagag  1025300  Previous    Next  AGI:  At1g03990.1    Description:  alcohol oxidase-related. similar to alcohol oxidase-related [Arabidopsis thaliana] (TAIR:AT4G28570.1); similar to alcohol oxidase-related [Arabidopsis thaliana] (TAIR:AT3G23410.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71439.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71289.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40598.1); contains InterPro domain Glucose-methanol-choline oxidoreductase, N-terminal; (InterPro:IPR000172); contains InterPro domain Long-chain fatty alcohol dehydrogenase (InterPro:IPR012400); contains InterPro domain Fumarate reductase/succinate dehydrogenase flavoprotei Range:  from: 1024846    to: 1027615    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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