Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                --------->HSFB2a(2)                                                                              <---------HSFB2a(2)                                           --------->GLK1(2)               --------->GLK1(2)     ----                                          <---------GLK1(2)               --------->ARR11(3)     ----                                          --------->ARR14(2)              --------->ARR14(2)     ----                              --------->ANAC58                            <---------GLK1(2)      ---- ------->LBD16                --------->ANAC46                            <---------ARR14(2)     ---- ------>LBD16                 --------->ANAC58----------->HVH21         <---------TOE2(3)--------->ANAC58 ------HSFB2a(2)            --------->MYB52(1)<---------YAB1            ----------->ARR10--------->ANAC46 ----->HSFB2a(2) ----------------->AGL1   <---------ARR14(2)            <---------YAB1   --------->ANAC58   ccgaagcacttctgcaattgccaaaaaaaaaaacgaaacattcagattctgacagtccgatttcaatagacattaagattctcgaattcagacgaaacca  1013000                                 ----------->RAV1(1)       <---------HSFB2a(2)      <------NtERF2    --------->GLK1(2)          ------>NtERF2                 --------->ANAC58   <---------ARR14(2)          ----------->RAV1(1)           --------->ANAC58   <---------GLK1(2)          --------->ANAC58            --------->LBD16   --------->ARR14(2)         --------->ANAC58           ------->GAMYB ----->ANAC46              ------->TEIL                 <---------LBD16                           --- ----->ANAC58           --------->ANAC58               -------->P                        <---------TOE1(3) -->MYB83---------->DOF2<---------MYB52(2)           <---------WRKY12 <---------At4g35610--------->MYB59 -->MYB46(1)            --------->ANAC58   <---------HSFB2a(2)      <-----------RAV1(2)  <---------TOE2(3) ----->ANAC58   --------->YAB1--------->ANAC46       <---------WRKY38(1)    --------->YAB1   <-------TEIL   agccagattccaaaagaaacatgatcacgaacgcgccacaaaattacagaagaagtcaaccggaagaaacccagatgatcaaaattccatttaggttgat  1013100                   ------>MYB46(1)               ---------->DOF2                   ------>MYB83            -------->HAHB4              <-----------GT1                 <---------MYB59           --------->YAB1            --------->AHL20(2)                 --------->TOE2(3)        <---------YAB1     --------->LBD16         <------MYB46(1)                 --------------->AGL15  --------->YAB1     <---------LBD16           <------MYB83                 <---------------AGL15  <---------ICU4   --------->GLK1(2)          --------->MYB59 <                ----------------->AG --------->TOE2(3)   <---------ARR14(2)         <---------TOE2(3) ------>WOX13(1)----------------->AGL1 --------->ICU4    --------->ARR14(2) <---------LBD16         -   caatcggagaaaaaaaaaacctaattgagaaaacaaaatccataatgatacaaaagaaaaatccggtggaattaaacctctgggattaggtttcttagtg  1013200                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                     --------->ZAT14                                                                          <---------LBD16        <---                                                                    <---------HSFB2a(2)  ----------->RAV1(1)    <-------TEIL      <---------ANAC58                              --------->HSFB2a(2)--------->SPL7 ---------ARR11(3)    <---------ANAC46                           <----------DOF2 --------->GLK1(2)<-- -------->ARR11(3)    <---------ANAC58                      ---------->DOF2--------->ANAC46    ------   aagatgttcatgtttcttctccttgcttgttttgtttttctctgtgaaattgaagatggtctcaaagcttttagaacacggagactctgtaccacagagg  1013300                                                                                       <-----------TBP                                                                                    <---------YAB1                                                                              --------->ICU4                                                                          --------->TOE2(3)        <-                                                                         <---------ANAC46          -- ------>MYB46(2)                                                         <---------ANAC55(1)      --- ------>MYB111(1)                                                        <---------ANAC58  <---------YAB1 ------>MYB111(2)                                <---------TOE1(3)       ----------->GT1 <---------AHL20(2) -----P                              <---------At4g35610        *TSS     <---------ANAC58--------->AHL20(2) -------MYB46(3)                 ------>ZmHOX2a(2)     <---------AHL20(2)--------->ANAC55(2)      <-- ------>MYB.PH3(2)         --------->ANAC55(2)   <---------TOE2(3)       <---------ANAC55(2)   <-----   tagttagagagagagagatttagcttcaaacgtgatcgcagcaaatttttgaaggttttaattttctcatcgattacgtaaatattcttatttatatttg  1013400                        <---------AHL20(2)                        --------->AHL20(2)                       --------->AHL20(2)                       <---------AHL20(2)           <-----------GT1                                                  <---------AHL20(2) <---------YAB1       <---------YAB1         <---------AHL20(2)      ----------->GT1 --------ICU4       <---------ICU4          <-----------TBP     --------->YAB1               -------- ------->ATHB12    --------->ICU4          --------->GLK1(2)    --------->ANAC46  <---------MYB52(1) ------>ICU4       <---------YAB1  <---------ARR14(2)           --------->ANAC55(2)      <-----------GT1 -------YAB1<---------At5g28300    --------->ARR14(2)     --------->TOE2(3)<---------AHL20(2)-------- ----AHL20(2)   <---------YAB1 --------->LBD16           ----------->GT1   --------->AHL20(2)--------   attattagtttttttactgtgattattaaattccacaaatacgagaatttatagctaaaacgttatacataatgtaattaaatcgttttttttacacgac  1013500                                            <---------YAB1               --------->AHL20(2)        <-       --------->TOE2(3)            <---------AHL20(2)                   <---------AHL20(2)   <------       <---------MYB59              --------->AHL20(2)  <---------AHL20(1)       --------->TOE2(3) --       --------->TOE2(2)         --------->AHL20(2)     --------->AHL20(1)   <---------AHL20(2)   ---     -------->P                 --------->AHL20(2)      <---------AHL20(2)  --------->AHL20(2)<------  <---------MYB52(2)        --------->AHL20(2)        <---------YAB1    --------->AHL20(2)    ------- ->ANAC46          <---------------AGL15 --------->AHL20(1)         <---------YAB1            ------- ->ANAC58          --------------->AGL15--------->AHL20(2) <---------AHL20(2)--------->AHL20(2)<----- ->ANAC58       <-----------GT1 <---------AHL20(2)   --------->AHL20(2) <---------AHL20(2)   --------   tactactaacctaagtattttctatttagaataaataaataaatatatgatacaatattatatttttgttttgattaaattaatctaaaaacaaaattaa  1013600                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                                <---------ICU4                                                                               --------->ICU4                                                                               --------->AHL20(2)    --------->ATHB12                                                   <---------MYB52(1) --------AHL20(2)                                                     <---------DEAR3(2) ---AHL20(2)                                                          --------->At4g35610 ------->AHL20(2)                   ---------->DOF2                   <---------At4g35610 ------>YAB1                --------->WRKY18(1)                  --------->MYB46(3)--------->RVE1(1) ---AHL20(1)              ----------->GT1                      --------->MYB52(1)  --------->CCA1(1) -->AHL20(1)        --------->CCA1(2)                 <----------ID1 <---------DEAR3(1) -->AHL20(2)       --------->ARR14(2)      ----------->GT1    --------->ARR11(1)<---------AHL20(2) ----AHL20(2)      <---------ARR14(2)    ----------->GT1  ---------->DOF2 ----------->GT1           < ->AHL20(2) ---------->DOF2<-----------HVH21        ---------->DOF2  <---------MYB46(3)           ---   ttttaatccttggcaaaaggagataggggggtcaaacagaaagaagtgaaaaaaaaaagaaaaagaaacggccggtgagtaataaatatctctcgaggtc  1013700                                            ------>MYB83                                          --------->AtMYB61                                         <---------HSFB2a(1)                          --------->LBD16<---------HSFC1(2)                            <---------At4g35610              *TSS        ------>NtERF2--------->ARR14(2)                  --------->GLK1(1)            <----------DOF2     <---------ARR11(3)     <----------DOF2    <---------ARR14(2)       <----------DOF2   <---------ETT(1)--------->HSFB2a(1)              --------->ARR14(2)---------    ------>ZmHOX2a(1)    <---------LBD16 --------->HSFC1(2)            ------>ZmHOX2a(2)    <--------   <---------ALFIN1     <---------LBD16<---------GLK1(2)        --------->ATHB12<----------DOF2 ------>ZmHOX2a(1)      --------->RAP2.6(3) ------>MYB46(1)    <---------YAB1  <---------ANAC58 ---------ALFIN1     <----------DOF2   <---------ARR14(2)      <---------ATHB51<---------ANAC58 --->ZmHOX2a(1)--------->YAB1   --------->ARR11(3)  <-----------GT1 --------->ATHB12 <---------ZAT18   ctcctcctcctttcctttgataactttccggcaaaatctcagaacctccccatttttctttgccgattattgatcggaattgctttgttcgctcatctgc  1013800                                               <---------------AGL15                             <---------O2      --------------->AGL15                             <---------ANAC58 ----------------->AGL3                             --------->TGA1a  <-----------------AGL2                             --------->O2     ----------------->AGL2                             <---------TGA1a  <-----------------AG                             <---------ANAC55(2)                             <---------ANAC55(1)                             --------->ANAC55(2)                             <---------ANAC46 <-----------------AGL1          <-----------GT1                             <---------ANAC58 <-----------------AGL3       --------------->AtSPL8                       --------->GLK1(2) <---------At4g35610               <---------------AtSPL3                      <---------GLK1(2)  --------->At4g35610               <---------------AtSPL8                     <------ZmHOX2a(1) --------->YAB1             ------>ZmHOX2a(1)         ------>ZmHOX2a(1)   <---------bZIP60(2)                 --------->TOE2(3) >At4g35610     --------->ALFIN1      <---------ATHB12        <---------ARR14(2) <----------DOF2 -At4g35610     <---------REM1(1)   --------->WOX13(1)        --------->ARR14(2) <---------DAG2   caacttccttcctactcggtgtaggaatcttacgtgtccaatcatctgtctatttttggaaacaaatcctcagtgattttgtactttacttatatcaaat  1013900  Previous    Next  AGI:  At1g03950.1    Description:  VPS2.3. similar to VPS2.2 [Arabidopsis thaliana] (TAIR:AT5G44560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40605.1); contains InterPro domain Snf7; (InterPro:IPR005024) Range:  from: 1011171    to: 1013364    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g03960.1    Description:  calcium-binding EF hand family protein. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28900.1); similar to calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative [Arabidopsis thaliana] (TAIR:AT5G44090.1); similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT5G28850.2); similar to putative protein phosphatase 2A regulatory subunit [Oryza sativa (japonica cultivar-group)] (GB:AAK13162.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40604.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65086.1) Range:  from: 1013714    to: 1017928    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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