Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <---------ZAT14                 --------->ZAT14              --------->ANAC58       <---------ALFIN1              --------->ANAC58      --------->ZAT14                                              <---          <---------ANAC55(2)       <---------ZAT14                                              ----          --------->ANAC58      --------->MYB52(1)         ----------->GT1                 <--------- -------------AtSPL8          <------------MYB.PH3(2)    ---------->DOF2                   ---------- ------------>AtSPL8          <---------MYB52(2) --------->TOE2(3)                         <---------ALFIN1 ----DOF2 --------->ANAC58<---------ARR11(3)     <----------DOF2                      <-----------GT1 >At4g35610--------->TOE2(3)  <---------MYB59<----------DOF2  >>>>>>>>>>GT-3b  <----------DOF2<------   aatgtactaaaaacgtaagtaaactgaagataactaactacactcttctttctttaatacaaagaaaaatagattgcaagtctttttttaatcccacttt  1004400                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                            ---------                                                                                           <--------P         <---------AHL20(2)                                                              ----------->GT1         --------->AHL20(2)                                                         ================MYC_MYB        --------->AHL20(2)                           <------ZmHOX2a(1)              --------->bZIP60(2) --------->ANAC58                                  <---------TOE2(3)                --------->O2 --------->ANAC58                                  --------->ANAC46                 <---------TGA1a ------HSFB2a(2)                              --------->GLK1(2)     --------->YAB1  <---------O2<---- ----->HSFB2a(2)           --------->ATHB12 --------->ICU4   --------->ATHB12       --------->TGA1a ------AGL15          <-------TEIL     ----------->GT1      <---------ATHB12        --------->ANAC46 ----->AGL15  <-----------GT1          --------->YAB1<----------ID1<---------YAB1 <---------ALFIN1 ----DOF2--------->AHL20(1)--------->YAB1 --------->YAB1--------->MYB46(3)  --------->ARR14(2)<------   gagaagccaaattaattatccatattcattcattagttttatagtaataatctaaggaacaaatgatttatgatatagtatcgtccacgtctggtagatt  1004500                        <----------ID1                       ----------->GT1                     <---------WOX13(1)                   --------->ATHB12                  <---------YAB1                  ------>ZmHOX2a(1)                 <---------------AGL15                      --------->ANAC55(1)                 --------------->AGL15                      --------->ANAC46                ----------------->AG                 ------->GAMYB                <-----------------AGL2         --------->ANAC46         <---------MYB46(3) --->ARR14(1)   <-----------------AG           --------->ANAC58       <-------GAMYB -->ARR14(2)    <-----------------AGL1         --------->ANAC58      <---------MYB46(3) -->ARR11(1)    ----------------->AGL1        <-------MYC3  --------->ANAC58 ---ARR14(2)  <-----------GT1          <---------GLK1(1)    <---------ANAC55(2) -->ARR10  <---------ARR14(2)          --------->GLK1(1)    --------->ANAC58 ---TEIL   --------->ARR14(2)    --------->GLK1(2)  --------->MYB46(3)<---------At4g35610 ---GLK1(2)<---------TOE1(2)---------->DOF2   ------->MYC3  --------->ANAC55(2)          <---------TOE2(3)   cggatgagactcgtattttcctgattgggaaaaagaatatgaaatccatatgcaacgacaacacgtatgggcagttgttgttcccaaatttgatgtatac  1004600                                                                   <---------ICU4                                                                   --------->ATHB51               <--                                                                  <---------YAB1                 <---                                                             <---------At4g35610                 ----                                                            >>>>>>>GRF7<-----------GT1           <---                                                --------->ANAC46  --------->ICU4             <-------                                        --------->KAN4(1)   --------->MYB59              ----------->TBP                    <-------TEIL       <---------KAN4(2)   <-----------RAV1(2)      --------->ZAT6---         --------->STY1(2)         --------->YAB1        <-----------HVH21--------->TOE2(3) ---------         <---------STY1(2)      --------->YAB1  --------->bZIP60(2)<--------HAHB4<-----------GT1 ----   aaatgactactagctacagaaattcatatactactaataagaacattcacatgtcactatgtcaggtcataattaacctctattttccactatataaaat  1004700         ------>MYB83         ------>MYB46(1)                                                              --------->ATHB12        ----------->RAV1(1)                                           --------->ALFIN1--------->ATHB51 -------AHL20(2)                                                    <---------ANAC46  <---------ICU4 ------AHL20(1)                                                     <---------ANAC55(1)           <-- ----->AHL20(2)             ------>MYB83                            *TSS           --------->YAB1---- ------AHL20(2)     <---------------AtSPL8                          <---------ANAC58 --------->ICU4 --AHL20(2)----------->RAV1(1) --------->AHL20(2)                   <---------ANAC58 <---------YAB1 ------>AHL20(2)    --------->DAG2                                  <---------bZIP60(2)     <-------- >AHL20(2)--------->MYB46(3)------>MYB46(1)     <-------TEIL   <---------ICU4<---------AtLEC2 ------- ----->AHL20(1)   ---------->DOF2        ------>NtERF2  ----------->GT1    <---------ANAC46 <--------   ttatttgcaccaacaacaaaaaaaggtaccaaatgaaatactctgccaaattcatcttctgttaaaaatggcgtgtttcgcatggtcataattggagtga  1004800                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                            <--------                                                                                            ---------                                                                                            ------->TEIL                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                           <---------CCA1(2)                                                                                           <---------GLK1(2)                                                                                           <---------ARR14(1)                                                                                      --------->MYB55(1)                                                                                     <---------MYB52(2)                                                                                   <---------ICU4                                                                                   <-----------GT1 ----ZmHOX2a(1)                                                        <---------ANAC58  <---------MYB59 ------->GT1                                                           <---------ANAC58--------->MYB52(1) -ANAC58              <-----------HVH21    <----------DOF2          ------>ZmHOX2a(1)--------->MYB46(3) -->ALFIN1         <---------GLK1(2)   <---------CCA1(2)           <---------MYB59--------->ICU4 -ANAC58      --------->MYB52(1)--------->AHL20(2)       <----------DOF2        --------->YAB1     <<   ggaaaaaaaaaaaaaaaaacagaatgtcacaaaaaaaaatcatctcttttccagttttcctttgttattcctaacttgtctgtaataactaccgaatctt  1004900       <---------YAB1  <<<<<<<<<TBF1 ->HSFC1(2) --HSFC1(2) ->HSFB2a(1)                                                   --------->ANAC55(2) --HSFB2a(1)                                                  <---------TOE2(3)    <---------DEAR3(2) ---ARR10                                                    <-----------GT1   --------->ALFIN1 >ARR14(2)                                             ---------->DOF2         <-----------RAV1(1) -ARR14(2)                                        <---------ZAT2           <---------ANAC58 >GLK1(2)                                         --------->ZAT2           <---------ANAC46      ---- -ARR11(1)<---------YAB1                          <---------At4g35610      <---------ANAC58      ---- <<<<<<<TBF1 <---------TOE2(3)                    --------->At4g35610<---------AHL20(2)       -------   cttcttcttcttattaatgttcaacaaaattcgacatttttgggtctaatccagctcaaaagtttacgtttttatttgtgtgtgtcggtctgtaagagtt  1005000                                                            <---------HSFB2a(2)                                                            --------->HSFB2a(2)                                                        <---------PCF2                                                        --------->PCF5                                                        --------->ZAT18                                                       <------NtERF2                              <--                                                       --------->ATERF1(1)                        <--                                                       <---------ATERF1(1)                    <------                                                       ------>NtERF2                          <------                   --------->DAG2                     <---------ATERF1(1)                     -------               --------->ANAC58                      <---------ANAC58                      --------->MYB52(1)        <---------------AGL15                        <---------ANAC46                   --------->At4g35610       <---------ANAC58                              <---------ANAC58                   <---------At4g35610       <---------ANAC58     --------->ATHB12         --------->ALFIN1               --------->YAB1<-- ----->MYB52(2)--------->ANAC58                      --------->ATERF1(1)            <---------REM1(1) ----->MYB59   --------->ANAC46                     ------>NtERF2             <-----------HVH21  <--- ----->MYB.PH3(2) ---------->DOF2             --------->GLK1(2)              ----------->GT1  <------   agttcgatttcttatccaagtaaaggggtttcattggctaaaattgacaatcggggcgggccctagaagaaaatatgaactgtcaattgtagcagacggt  1005100                                                                               --------->GLK1(1)                                                                              --------->ARR14(2)    <-------TEIL                                                           --------->LBD16 -------ANAC58                        =============================================================== -------ANAC46                        <-----------------AG                <---------LBD16 ---DEAR3(2)                          <-----------------AGL1      --------->ANAC46    --------->ATHB51 ---HSFB2a(1)                      --------->GLK1(1)            <-----------GT1<---------GLK1(1) -->HSFC1(2)                <---------GLK1(1)          <-------GAMYB      --------->LBD16    <------- -------ANAC58        --------->ARR14(2)              <---------ANAC46------>NtERF2--------->TOE2(3) ----TEIL             <---------ARR14(2)              <---------MYB46(3) ----------->RAV1(2) <------- ---HSFC1(2)  <---------AtLEC2     <---------GLK1(1) ---------->ID1  --------->DEAR3(1)      --------   tcgtgattcatcgttttcatggccgattcgatttccgatttccccatgagggtttgtcgttgatattaacgcctcccctggatttccataatttgccttg  1005200                 <---------ARR11(3)                 <---------ARR14(2)                                                              ----                 ------->TEIL                                                                    <---                 --------->ARR14(2)                                                              <---                 <---------AGP1                                                                 <----                 --------->ARR11(3)                                                           -------      <---------ZAT6                                                                         <-------    <---------ANAC46                             <------NtERF2                         <---------ARR14(2)    <---------ANAC58    ---------->DOF2        --------->ALFIN1            <-----------HVH21 --------    <---------ANAC58<----------DOF2          <---------ANAC58          <---------MYB46(3)    <------- ========MADS_MADS ------>ZmHOX2a(2)         <---------ANAC46<---------ARR14(2)        --------->ARR14(2) --ANAC58  <---------YAB1                    <---------ANAC58--------->GLK1(2)         --------->GLK1(2) --ANAC58  --------->ICU4           <---------DAG2           --------->ARR14(2)       <---------GLK1(2) ------->AGL15<---------WOX13(1)    <----------DOF2         <---------GLK1(2)  <---------ANAC55(2)   tttagttcgtgttatgatggatctttgaaagctattcccttttttttgggtgtcgaaatcgagaatctgagagttgttgtcacttgaagaatctggattc  1005300  Previous    Next  AGI:  At1g03920.1    Description:  protein kinase, putative. similar to kinase [Arabidopsis thaliana] (TAIR:AT2G20470.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G14350.3); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G14350.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40608.1); similar to protein kinase MK6 [Mesembryanthemum crystallinum] (GB:CAB82852.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71422.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Prot Range:  from: 1001320    to: 1004382    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g03930.1    Description:  ADK1 (DUAL SPECIFICITY KINASE 1); kinase. similar to CKL7 (Casein Kinase I-like 7), casein kinase I/ kinase [Arabidopsis thaliana] (TAIR:AT5G44100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71424.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 1004768    to: 1008369    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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