Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ZAT18                                       --------->ZAT14                                       <---------ZAT14               <-----------GT1    <---------YAB1                 <-------MYC3                 <---------ANAC55(2) <---------WOX13(1)                ------->MYC3                 --------->ANAC55(2) -------YAB1           --------->ANAC46<---------ZAT18          <---------ANAC55(1) -ALFIN1          --------->ARR14(2) --------->ZAT14        <---------GLK1(2)                 ------- >ANAC58    <----------DOF2    ------->TEIL               --------->ICU4                      ------- >ANAC58 <---------AHL20(2)    <-------TEIL       <-------TEIL  <---------ANAC46              -------   ttgattgttattttctttcatatacactgaatgtacatgtgtacacttggcatacatggcaagattatgtgttacaatatagactgtgccattgccatgc  988800                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                           <---------AHL20(2)                                                                           <---------AHL20(2) -------        ------>ZmHOX2a(1)                                                 <---------AHL20(2)  <------        <-----------RAV1(1)                       <---------MYB52(1)      --------->AHL20(2)---------      ----------->RAV1(2)                    <---------ARR14(2)          <---------WOX13(1)<---------YAB1 -->ANAC58                                   --------->GLK1(2)        --------->ICU4   ----------->GT1 -->AtLEC2                        --------->WOX13(1)        ------>ZmHOX2a(1) <---------AHL20(2)   -- -->ANAC58             --------->YAB1        --------->ARR14(2)    <-----------GT1  ------->TEIL   <-   aatgtgactcctgtggccatttctatcacaatgtgtcaatcttggagtatccgttgtttatcctctaatttactgattaatttatgaacatgtataatta  988900                        --------->TOE2(3)                      <---------ARR11(3)                      --------->ARR11(3)                     <---------CCA1(1)                     <---------GLK1(1)    --------->YAB1   --------->CCA1(1) --->ATHB51          --------->RVE1(1) ----ICU4            <---------RVE1(1)                                                            --- --->AHL20(2)        --------->GLK1(1)                                                ----------->GT1 ----AHL20(2) <---------ANAC55(2)                                                    ----------->GT1 -->ICU4    ------>ZmHOX2a(2)                                            ----------->GT1          --- ---YAB1  --------->ARR11(3)                                            <---------TOE2(3)     <------ >YAB1    <---------ARR11(3)        <-----------GT1          <---------HSFB2a(2)   ---------->DOF2--- ------->AHL20(2)   <---------ARR11(3)                       --------->HSFB2a(2)  <------ZmHOX2a(1) --------AHL20(2)   --------->ARR11(3)          <---------YAB1       <---------WOX13(1)  --------->AHL20(2)   tttatatcatatgatctcgtaagatatcttagcattttccaccatatgttattagtaaatcatctagatggattgatgtaaataggaaagttaaattaac  989000                                               ----------->GT1      --------->DAG2                           --------->YAB1     ---------->DOF2                          <---------YAB1                   --------->AHL20(2) ------>ANAC58                                <---------TOE2(3)                <---------AHL20(2) ------>ANAC46                            <---------GLK1(2)       --------->ANAC58        <---------- -----GT1 --------->MYB52(1)            <---------------AGL15     --------->AtLEC2       --------->ANAC46 ------>ANAC58     ---------->DOF2     <-----------------AGL1     --------->ANAC58   <-----------GT1   acaccaaaaaagtaactgattaaaagcatacaacttaatattcagattatggtaactaaatcagtctcatgcaaactccaaaaaattatacgagtcacaa  989100                           --------->ANAC55(2)         --------->AHL20(2)      <-----------GT1             ----------->GT1               --------->ANAC58                ----------->TBP             --------->LBD16      <---------YAB1 --------->YAB1            --------->AHL20(2)           <---------LBD16 <---------ANAC55(2) -------->P        <------------MYB.PH3(2)         *TSS -HVH21  <-----------GT1  <-------TEIL     --------->ANAC58--------->ZAT6<----------DOF2  --------->TOE1(2)   ctcttgatttttttccggttaaacaaaatacatattttcatttgtatgcaaccagaataaaacactaactatctcctttaaataccattttccctacgag  989200                                           --------->ARR14(2)                                      --------->ANAC46                                      --------->ANAC58                                    <---------CCA1(2)                                      --------->ANAC58 <----------DOF2      <---------MYB52(1)   ---- --------->ANAC46       --------->ANAC46   <---------ARR14(2)              <-----------HVH21 <-------   tctacgacgctctctaaacttcttatacaaaacaaaacacacccaaatatgcataagcttttgttttctcttctctccgtcgtctcactctcatttctcc  989300                                   <------NtERF2                                   --------->RAP2.3(1)                                   --------->ATERF1(1)                                   --------->DEAR4(2)                    --------->ANAC58                                                  <-----------RAV1(2)                    --------->bZIP60(2)                                            <------NtERF2                    --------->ANAC46          ------->GAMYB                        <---------At4g35610                    --------->ANAC58          --------->ANAC58                   --------->DEAR3(1)             --------->DEAR3(1)   ------>NtERF2 ----------->RAV1(2)              --------->RAP2.3(3)            <----------CDC5       <---------RAP2.3(1)                           <------NtERF2            <------NtERF2        --------->DEAR3(1)                             --------->ATERF1(1)            --------->ATERF1(1)  <---------DEAR3(1)                            --------->PCF2           ------>NtERF2 <------NtERF2        --------->ANAC58                 ------>NtERF2<------NtERF2           <---------RAP2.3(1)  <---------ABI4(2)                              <---------ATERF1(1)          <---------DEAR3(1)    --------->ATERF1(1)                    ------->GAMYB<-----------HVH21     <---------AtLEC2   ------>NtERF2 <---------MYB52(1)              --------->MYB46(3)   ------>NtERF2 -->ZmHOX2a(1)------>NtERF2     --------->RAP2.3(1)                  --------->At4g35610  ----------- ----GT1  <---------ANAC46     <---------ATERF1(1)                <---------ATHB12 --------->At4g35610   tcttcttccatggcgccgaggcacgccagcgagaggcgccgtttccaaacgcctgccatttcagccaaatcaacagcctcgcgcccgctcaggcgacgaa  989400                                                                      --------->ANAC58                                                                    <---------ANAC58                                                                    <---------ANAC46                                                                   <------NtERF2                                                       --------->LBD16--------->ANAC58                                                      <---------DEAR3(1)                                                      --------->DEAR3(1)                                          --------->GLK1(1)       ------>NtERF2                                          --------->ZAT2          --------->MYB55(2)                            <---------ALFIN1         --------->ATERF1(1)                          --------->TCP16(2)         <---------LBD16<---------ANAC58                         <---------PCF5   <---------GLK1(1) --------->MYB52(1)                         <---------TCP16(1)         <---------RAP2.3(1)    <---------ALFIN1            --------->At4g35610           --------->At4g35610    --------->ALFIN1                  <-            <---------At4g35610           <---------ZAT2   ----------->HVH21    <-----------HVH21  <-          <-----------RAV1(2)         <----------CDC5<------NtERF2<---------MYB46(3)<---------At4g35610 >HVH21 <-----------HVH21<---------PCF2   <---------At4g35610    <---------DEAR3(1) --------->At4g35610   gttcgaagccggtcagatggaagtatgggaccacatgagccctgagctccgatgcgccggtgtaacggtggctcgcatcacccttcagcccaattccatt  989500                               <---------ANAC58                        ------>MYB46(1)                      <---------MYB111(1)                      --------->MYB46(3)                      <---------MYB55(2)                      ------->PIF5                      <-------PIF5                     <---------At4g35610                   --------->AHL20(2)                  ------                     ----------->RAV1(2)                --------->AHL20(2)                     ------                     --------->ZAT2                    <---------AHL20(2)                      ------            <----------DOF2    <---------ANAC58        --------->AHL20(2)              --------->AHL20(2)        <----------DOF2 ------>MYB83               --------->AHL20(2)                  <---------AHL20(2)      <------NtERF2  <---------ZAT2              --------->ANAC58                   ------>MYB83    <---------ZAT18  --------->At4g35610         ----------->GT1    <----------DOF2 ------>MYB46(1) --------ANAC58    <---------ALFIN1              --------->ANAC58   <---------DAG2<---------MYB59 --------ANAC58   <---------ZAT18     --------->WRKY38(1)  <---------AHL20(2)   <---------ARR11(3)   ttcttgcccgctttctttagcccacctgcccttgcttacgttgtccaaggtaagaaaataaataaatacgctttttgatcaagacctaattaaaaactcg  989600                                                <------ZmHOX2a(1)                                             <-----------RAV1(2)          <---------ARR11(3)       <---------YAB1          --------->ARR11(3)       <---------AHL20(2)                   <---------ANAC58        <----          --------->GLK1(2)  <---------AHL20(2)--------->LBD16     --------->ATHB12  ================ --->ANAC58                <----------DOF2   <---------LBD16<---------ANAC46         ------>ZmHOX2a(1) --->ANAC46        --------->DAG2 <---------AHL20(2)      --------->CCA1(2)    <--------P       ----- --->ANAC58       ---------->DOF2 --------->AHL20(2)  <------ZmHOX2a(1) <---------ANAC58   <---------   caacctatagaaaatctaaaaaaagtggtcttttattttaattgttttcaggagaaggagttatggggacgattgcttctggttgtcctgagacttttgc  989700  Previous    Next  AGI:  At1g03890.1    Description:  cupin family protein. similar to CRA1 (CRUCIFERINA), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G44120.3); similar to Cruciferin PGCRURSE5 precursor (11S globulin) (12S storage protein) [Contains: Cruciferin PGCRURSE5 alpha chain; Cruciferin PGCRURSE5 beta chain] (GB:Q02498); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051); contains InterPro domain 11-S plant seed storage protein; (InterPro:IPR006044) Range:  from: 989197    to: 991019    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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