Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->ANAC58                --------->ANAC58                --------->ANAC55(1)                ----------->GT1                --------->ANAC46                --------->ANAC55(2)                <---------ANAC55(2)     --------->DAG2              <-----------HVH21    ---------->DOF2             <---------ZAT6  --------------->AGL15         --------->ALFIN1  <---------------AGL15       <---------ANAC58 ----------------->AGL1       <---------ANAC58 ----------------->AG         <---------ANAC46 ----------------->AGL3    --------->ALFIN1<---------ATHB12    ---------->DOF2        <---------AHL20(2) ----------------->AGL2   ------->MYC3     <------ZmHOX2a(2)--------->TOE2(3)         --------->AHL20(2) -->GT1  ----------->GT1  <-------MYC3  --------->LBD16     --------->TOE1(3)      ----------->GT1   aatgccaaaagtagaaaaacgtaatacatgtggagtgtcaccccgatcaagagagctatttcccttaaaccaattggtgtcaaattagttaattatctaa  985400               <---------YAB1              --------->AHL20(1)              <---------AHL20(2)                          <---------ZAT14              --------->AHL20(2)             --------->YAB1           --------->ARR14(2)        -----              <---------AHL20(1)             <---------ICU4           <---------ARR14(2)       <-----             --------->YAB1                 <---------ATHB12       <---------ANAC46       --------->ZAT6      --------->ETT(2)                   <---------AHL20(2)    <---------ZAT14           --------->ZAT14      <---------ETT(2)                  --------->AHL20(2)--------->ZAT14                <---------ZAT14   accatgggtcgacaattataattcgatttcattgtttattgaataaatcataaccaagactaaactgtagcgaatatgaaacaaattggtctacactatc  985500                                    --------->AHL20(2)                                   <---------AHL20(2)                           <---------AHL20(2)      <---------WRKY18(1)                       <---------AHL20(2)       <---------ICU4                       --------->AHL20(2)     --------->ARR11(3)                 -------->HAHB4                      <---------AHL20(2)      <---------ARR11(3)              ------>MYB46(1)                      --------->AHL20(2)   --------->AHL20(2)               <---------MYB59    <-----------GT1   <---------AHL20(1)   <---------AHL20(2)     --------->YAB1--------->ICU4 ----------->GT1      --------->AHL20(1)--------->YAB1            --------->AHL20(2) ---->YAB1         --------->AHL20(2)  <---------AHL20(2)       --------->AHL20(2)                 <- ----YAB1          --------->ATHB51--------->AHL20(2)          --------->YAB1 ------>MYB83        <<<   attttgttacaaaatgttgaataatttattttaaaaaataaataataaaatcttgaccaaaactaaaataatatcagacctaattatcgaatgtaagtat  985600                                                                             ----------->GT1      <---------ICU4                                                      <---------AtMYB61       ---      --------->ATHB12                                               <---------ZAT6     <---------YAB1     <---------YAB1                                             <------------CBF      <---------AHL20(2)     --------->ICU4       <---------ANAC58                     --------->ATHB12      <---------YAB1  --------->ICU4          <---------ANAC58  --------->ATHB12  <---------AHL20(2)    <---------AHL20(2) ----------GT1--------->ATHB12             <---------YAB1     <---------YAB1 <---------ZAT6   ------- <<<<<<MYB98 <---------YAB1                <---------ATHB51  <---------AHL20(2)   <---------YAB1  <--   gttactgattattggattattggattatgcgtctatttgttttcgattattggatttgtctatttttattggtgttatggtgttatttttatttttaaaa  985700                                                                   --------->YAB1                                 --------->ANAC46                  ---------->DOF2                           <---------ANAC55(2)                    <---------ATHB12   <----------DOF2        <-------TEIL                      --------->WOX13(1) ------>ARR11(3)     --------->AHL20(2)           *TSS---------->DOF2      ----------->GT1 --->DOF2            ----------->TBP          ---------->DOF2 <---------ATHB12       <-----------HVH21 -------ARR11(3)   ------>ZmHOX2a(1)      ------->GAMYB ----------->GT1  <------ZmHOX2a(1)   gaactctttacaacaagtctcctataaatacataaactccataacccacaaagtaagaaagtaaatcaataaagaggaagaaaaatgggtcgagtctcat  985800                                                                                                   --                                                                                                  ---                                           <---------ALFIN1                    <------ZmHOX2a(2)  <--                                          --------->ZAT14                <---------At4g35610      ---                                          <---------ZAT14     --------->MYB52(1)  --------->At4g35610               ----------->HVH21          <---------REM1(2)--------->PCF5<---------ZAT2           <--             <----------DOF2  ------>ZmHOX2a(1)         --------->ALFIN1 --------->At4g35610      ---       <----------DOF2      ------>ZmHOX2a(2)      --------->MYB52(1)    --------->ZAT2  <---------ZAT18  <-----------GT1         <---------ARR11(3)       ----------->RAV1(1)  ------>NtERF2 ---------->DOF2   ctattatctctttctctttgacactcttgatcctcttcaatggctacactgcccaacagtggcccaacgagtgccagctcgatcaactcaatgcgctcga  985900                                                             --------->ARR14(2)                                                            <---------ZAT2                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                                     <---------ALFIN1         --------->YAB1                            --------->AtLEC2      --------->LBD16        <---------ATHB12                      --------->AtMYB61          ------>NtERF2 ------>MYB46(1)                             --------->MYB46(3)        <---------LBD16 ------>MYB83                               --------->TCP16(2)   <-------GAMYB ------->AtMYB61                           --------->PCF2   --------->ZAT2 ------>HSFC1(2)         <------MYB83 --------->ALFIN1------->TEIL<---------MYB52(1) -------HSFC1(2)         <------MYB46(1)<---------HSFB2a(2) --------->At4g35610                 ----- ------>HSFB2a(1)        <---------MYB46(3)<---------TCP16(1)<---------ARR14(2)   ------------------- -------HSFB2a(1)       <---------AtMYB61  <---------PCF5 <---------ALFIN1  <----------DOF2   <------ ------>MYB46(3)        --------->ALFIN1--------->HSFB2a(2) <---------At4g35610   <----------DOF2   accatcccaaatcatcaagagcgagggtggtcgcatcgaggtctgggaccaccatgcaccccagctccgttgctccggctttgcctttgagcgtttcgtc  986000                                                 <---------TGA1a                                                 <---------O2                                       --------->LBD16<-------GAMYB                                      --------->RAP2.6(2)                                      --------->RAP2.3(3)                                      <---------ATERF1(2)          <---------ANAC58             -----                                      --------->DEAR3(1)          --------->ABI4(2)             <----                                      --------->ATERF1(2)     --------->ANAC46                  -----                          <---------DAG2<------NtERF2--------->MYB52(2)                      --------                          <----------DOF2        --------->TGA1a  <-------TEIL            --------->YAB1                       <---------ALFIN1------>NtERF2 <---------MYB46(3)                 --------->AHL20(1)                 <---------ANAC58    --------->RAP2.6(3)   <---------REM1(2)   <-----------GT1  <----                 <---------ANAC58  --------->ANAC46<---------MYB52(1)      --------->AHL20(2)<-------      <-----------RAV1(2) =================================bZIP_DOF<---------ANAC58     --------->AHL20(2)      ---------->CDC5 <---------ZAT18<---------LBD16 --------->MYB55(2)    <---------AHL20(2)-------- ---->ATHB12 <----------DOF2 <---------ANAC58    --------->O2<---------At5g28300        <---------AHL20(2) -->WRI1     ==============================================bZIP_DOF<---------ANAC46    --------->YAB1 -----TGA1<---------ARR11(3) <---------ANAC58    =============MYC_MYB  --------->AHL20(2)<---------YAB1   attgagcctcagggtcttttcttgcccactttcttgaacgccggcaaactcacgtttgttgttcacggtgcgtttatatatatactacattataataata  986100         --------->ANAC58         ----------->GT1    <---------ETT(2) ---->AHL20(1)                             <---------ANAC58                --------->AHL20(1) -----AHL20(1)                             <---------ANAC58                <---------ARR11(3) ---->ARR11(3)                 <---------ARR11(3)                          <---------AHL20(1)   ----- ->YAB1  --------->ANAC58   <---------AHL20(2)                             --------->ARR11(3)  <----- -----AHL20(2)   --------->YAB1--------->ARR11(3)                       --------->AHL20(2)    <------ --AHL20(2)      ----------->GT1   <-----------GT1     <---------------AtSPL3                 ------- ->AHL20(2) >>>>>>>>>>GT-3b --------->AHL20(2)         <---------------AtSPL8           <---------YAB1   tatagatcgacaagaaaaatagtaactaatataaatcttacatttccttgtccagtataagtactgcaaatgaaaaaaatatttggcattctcatagatc  986200                                 ----------->GT1                             <---------ICU4                             --------->ATHB12                             --------->ATHB51                    --------->YAB1                            --------->ICU4             <---------AHL20(2)                            <---------YAB1           <---------YAB1<---------YAB1 ---->YAB1               <-------TEIL               <---------AHL20(2) -ZmHOX2a(2)       ---------->DOF2                  <---------AHL20(1) ---ARR11(3)     --------->HSFB2a(2)              <---------AHL20(2)      <------ZmHOX2a(1)         < -->ARR11(3)     <---------HSFB2a(2)              <---------YAB1<---------YAB1               --------   ataaaaaatagtagaagttccaaaagcttcattatttgtaaaaatgtttgatattattttttggctatgataaataggaaggggtctaatgggaagagtt  986300  Previous    Next  AGI:  At1g03880.1    Description:  CRU2 (CRUCIFERIN 2); nutrient reservoir. Identical to 12S seed storage protein CRB precursor [Contains: 12S seed storage protein CRB alpha chain (CRB) [Arabidopsis Thaliana] (GB:P15456;GB:Q9SAW0); similar to CRA1 (CRUCIFERINA), nutrient reservoir [Arabidopsis thaliana] (TAIR:AT5G44120.3); similar to cruciferin cru4 subunit [Brassica napus] (GB:CAA40980.1); similar to Cruciferin CRU4 precursor (11S globulin) (12S storage protein) [Contains: Cruciferin CRU4 alpha chain; Cruciferin CRU4 beta chain] (GB:P33522); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contai Range:  from: 985750    to: 988145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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