Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <xxxxx                                                                                              <xxxxxx                                                                                            <xxxxxxxx                                                                                            xxxxxxxxx                                                                                            xxxxxxxxx                                                                                            ---------                                                                                            xxxxxxxxx                                                                 --------->GLK1(2)         xxxxxxxxxx                                                                 --------->ARR11(3)       --------->AtLEC2                                                      --------->ANAC46                    --------->ANAC46      <---------AHL20(1)                         <----------DOF2 <---------ARR11(3) <---------GLK1(1)      --------->AHL20(1)                        <---------DAG2  --------->RVE1(1)   --------->GLK1(1)      --------->ARR11(3)  ------>ZmHOX2a(1)    ----------------->AGL1            <xxxxxxxxxxxxxxxxxxx --TEIL            <---------GLK1(2)         <-----------GT1  --------->AHL20(2) <xxxxxxxxxxxxxxxxxxx   atatgaaatattttgtggtcaaattctcctaaataagttttgatattttgccttttacgaaaaaaaaaatctaaactaagtatgtgatatccaagcagaa  944200             --------->YAB1            <---------ATHB51          --------->WOX13(1)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <-----------HVH21    <---------O2         <---------ZAT14  --------->CCA1(2)      --------->ZAT18 xxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxsmallRNA(s)   <---------ZAT18 xxxxxxxxsmallRNA(i)<-------MYC3 xxxxxxxxxxxxxx>smallRNA(le3)                                               ----------->GT1 xxxxxxxxxxxxx>smallRNA(si3)    <---------HSFB2a(2)                  <------MYB83 >YAB1----------->GT1--------->ALFIN1                                <------MYB46(1)  --------->ANAC55(2) xxxxxxxxxxxxxx>smallRNA(si3)<---------DAG2<-----------GT1          --------->MYB46(2)--------->ANAC46 xxxxxxxxxxxx>smallRNA(se3)  <----------DOF2      ------>ZmHOX2a(1) --------->MYB59  <-------TEIL xxxsmallRNA(le3)   ------->MYC3--------->HSFB2a(2)             <---------YAB1      <-----------GT1 - xxxsmallRNA(fl3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <---------YAB1 ----------------------->TaNAC69(2)   gtagagacgggtcaattatacgcgtggtacacttttggaagtgaattacatcctctaattttgattttgtttggtaatcggataatatacgtctcttcaa  944300                                                                   <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                   <-----------TGA1                                                                   <-----------HVH21                                                                  --------->O2                                                                  --------->TGA1a                                                                  --------->bZIP60(2)                                                        ====================bZIP_DOF                                                        <----------DOF2                                                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                  xxxxxxxxxxxxxxxx>smallRNA(i)             <----------DOF2                   xxxxxxxxxxxxxxxx>smallRNA(i)  ------->TEIL          ------->TEIL                       ---------->DOF2     xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <---------CCA1(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->ICU4   --------->ARR14(2)         ----------->GT1===============================bZIP_DOF   <---------ARR14(2)----------->GT1 --------->ICU4 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <-----   ------->TEIL      <---------ANAC55(2)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <----------ID1 ---------->GT1 <---------CCA1(2)    <---------ATHB51xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  xxxxxxxxxx   aaacgtatattgtatcttttatctcgtaaaattagaaaaattatggtgaaagtccaaactttttagacgcgtcagtatgaaccaaaaaaacaaaaatatg  944400                                                                                        <-----------GT1                                                                                     <---------ICU4                                                                                    --------->ICU4     <---------GLK1(1)                                                    ------>ZmHOX2a(2)    <---------ARR14(2)                                                   <------ZmHOX2a(2)    --------->ARR14(2)                        ----------->GT1           <---------ARR14(2)   <------ZmHOX2a(1)                     --------->ANAC46               <---------ARR11(3) <---------TOE2(3)                     <-----------GT1   --------->ARR11(3)      <---------YAB1 <---------TOE1(3)          --------->At4g35610          <---------ARR11(3)    --------->YAB1 ----YAB1xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <---------TOE2(3)--------->ARR11(3) <--------- xxxxxxxxxxxxx>smallRNA(si3)<---------At4g35610    --------->YAB1       --------->ARR14(2) <---------DAG2   attaaggatttgtgagaaaataagaggtttagcttaagaattcacaacatgtataataagattttagtataagggatcttagtataatttttactttttt  944500               --------->AHL20(2)               <---------YAB1               <---------AHL20(2)              --------->AHL20(2)              <---------AHL20(2)              <---------AHL20(1)            --------->AHL20(2)              --------->AHL20(1)          --------->AHL20(2)             --------->YAB1            --------->AHL20(2)              --------->HSFB2a(1)        ------>ZmHOX2a(2)           --------->YAB1                     <---------HSFB2a(1)       <------ZmHOX2a(2)           <---------YAB1                      <---------HSFC1(2)      <---------ARR11(3)          --------->AHL20(1)                   --------->HSFC1(2)     ------>ZmHOX2a(1)      <-----------ARR10           --------->AHL20(2)             ---------->DOF2              *TSS      <---------ARR14(2)        <---------AHL20(1)            ----------->GT1              ----------      --------->ARR14(2)        --------->AHL20(1)           --------->DAG2          <<<<<<<<<TBF1 -DOF2--------->ARR11(3)     --------->AHL20(2)            ---------->DOF2      <----------DOF2  <---   ttcccaaggatcttaatataattaacaaaaaaaaaatattataaaataatataagtatgctaaaaggtaaagaagtttctctctttcttcttcgtcctcc  944600                                      <----------ID1                                 ----------->GT1                              ------>MYB46(1)                              ------>MYB83                            <---------MYB52(2)                            <---------MYB46(2)                            --------->MYB46(3)                            --------->DEAR3(1)                           --------->ANAC58                           --------->ANAC58                           <------NtERF2                                                            <                          ------>NtERF2     <---------MYB52(2)     --------->ZAT18              ----- >ID1  <----------DOF2  <---------ABI4(2) ---------->DOF2     ---------->DOF2                  ------ -------DOF2   <----------DOF2--------->MYB52(1)    <------ZmHOX2a(1)            <---------ANAC46----   tttgttctcctttctctctttccatcggcaccgaaccgaaacaacaaagaacgaggaaatacaaataagcccacaagagagagacgtagatggagagata  944700                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                              ------>NtERF2                                                                                              -------                                                                                              <------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                            <------ZmHOX2a(2)                               ---------                                            <---------ZAT14                                 ---------                                           --------->ARR11(3)                              ------>NtERF2                                           <---------ARR11(3)                              --------->LBD16                                     --------->At4g35610                                   --------->ABI4(1)        <----------DOF2         --------->HSFB2a(2)                                       --------->DEAR3(1)   ---------->DOF2              <---------HSFB2a(2)                        <---------ANAC58<---------ATERF1(1)  <---------WRKY12              ===================HOX2a_HOX2a             <---------ANAC46--------->At4g35610  <---------WRKY38(1)           <---------HSFC1(1)           <---------ATHB12             --------->ANAC46  <---------WRKY45              --------->HSFC1(1)          --------->ANAC58             <---------LBD16 -----------HVH21     =============================HOX2a_HOX2a--------->YAB1      <-----------ARR10 ----->DOF2           ------>ZmHOX2a(1)   --------->GLK1(1) --------->ANAC58      --------->ARR11(3) --->CCA1(2)       <-----------GT1---------->DOF2          --------->WOX13(1)     <---------ARR11(3)< ----->DAG2    <----------DOF2  ------>ZmHOX2a(1)    <---------YAB1        <---------ANAC58<---------At4g35610   aaggtcaaagctttattctttttcctctctcttcctagaagcagagatcactgttatcaaacaatcaacaatgccttccttgaagagcttctccgccgcc  944800         >>>>>>>>>>WRKY26         >>>>>>>>>>WRKY38 ----->LBD16 -->NtERF2 ---->DEAR3(1) --->ATERF1(1) -NtERF2 >>>>>>>>>>WRKY43 -->ABI4(1) ---ATERF1(1) ->RAP2.3(2) ->RAP2.6(2) --ATERF1(2) ->ATERF1(2) ->DEAR3(1) --DEAR3(1) ->RAP2.3(3) ->RRTF1(2)          --------->ETT(1)                                     --------->CCA1(2) ->RRTF1(3)   --------->ZAT2                                              <------ZmHOX2a(2) >RRTF1(1)    <---------ZAT2                                   ---------->DOF2                      = >ATERF1(1)   ------>MYB83       <---------At4g35610  <---------At4g35610--------->AGP1             = >DEAR4(2)    ----------->RAV1(2)--------->At4g35610  <---------ZAT2     <---------ARR11(3)         - >RAP2.6(1)   ------>MYB46(1) <---------At4g35610     --------->At4g35610--------->ARR11(3)       --- >ORA47(2)    -------->P --------->GLK1(1)        ===============================HOX2a_HOX2a      --- >RAP2.3(1)  --------->MYB52(1) --------->GLK1(2) ------>ZmHOX2a(1)      <---------ARR14(2)     <---- >ERF1--------->At4g35610<---------GLK1(1)      ----------->RAV1(2)      --------->ARR14(2)    <----- ------ZmHOX2a(1)  <-----------HVH21       <-------TEIL   --------->ALFIN1===========================   gaggaagaagatgaccaactgggtcggaactcagaagctgaaagattcaatcctgaagctgtggagaaagaagaagatccagacaaaatggatgagaagg  944900                             --------->TGA1a                             <---------O2                             <---------TGA1a                             --------->O2                             <---------ANAC55(2)        <---------At4g35610  --------->ANAC55(2)    --------->ALFIN1    ----------->HVH21 ======================================bZIP_DOF ===============================bZIP_DOF --------->DOF2       --------->O2 ------>ANAC58        <---------O2                                                        <---------MYB52(1) ------>ANAC58        --------->TGA1a                         <---------MYB52(1)        <---------ANAC58 --ZmHOX2a(1)         <---------ANAC46                  <------ZmHOX2a(1)    ----------->GT1--------- -----ID1             <---------TGA1a       --------->At4g35610   <------ZmHOX2a(1)     <---------ANAC46 ==HOX2a_HOX2a<------ZmHOX2a(1)----------->HVH21  <------ZmHOX2a(1)     >>>>>>>>>TBF1   <---------ANAC58   acgaaagtggagatgaggaagacgacgtgaaacgtgaccaagtagaagcagaggatgaggaagcgttaggagaagaagaaggtgaaagtttcgttttttg  945000                                ------->TEIL                             --------->ANAC55(2)                             <---------ANAC55(2)                                          <---------AHL20(2)                       <---------AHL20(2)           ------->TEIL      --------------->AtSPL8 <-------                       --------->AHL20(2)     <-------TEIL       <---------MYB52(1)       --------->AHL20(2)                   <---------AHL20(2) <---------TGA1a          <---------ANAC58         <----------DOF2                  --------->ARR11(3)  <---------bZIP60(1) <---------ICU4                -------------                  <---------ARR11(3)  --------->bZIP60(1)<---------ATHB12               <------------                  <---------AHL20(1)  <---------ANAC46 --------->WOX13(1)   ----------->RAV1(1)------ >MYB52(2) <---------ANAC46 <-------TEIL     --------->CCA1(2) <---------ANAC58   ---------->DOF2   ctcttgtttatagtcgtggatatatttatatacgtatgtgatgtgagatacatgaatcaatcaatgcgttagtatgtacaacatgaaagtctttaattgg  945100  Previous    Next  AGI:  At1g03770.1    Description:  protein binding / zinc ion binding. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G44280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69774.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 944594    to: 947481    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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