Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <---------WRKY38(1)                                                            <---------WRKY12                                                           <<<<<<<<<<WRKY26                                          ----------->GT1  <<<<<<<<<<WRKY43                                         --------->DAG2    <<<<<<<<<<WRKY38                                        ---------->DOF2  <---------MYB46(3)                                     --------->AHL20(2)  <------MYB83                               <                                     <---------AHL20(2)  <------MYB46(1)                           --                                    --------->AHL20(2) <---------MYB52(1)                     -------                <---------AHL20(2) <---------YAB1    --------->ATHB12  --------->ATHB12      <-------            --------->AHL20(2)  <---------YAB1      <---------YAB1    --------->ICU4   --------->AHL20(2) ------GT1  <---------AHL20(2)----------->GT1     --------->YAB1      <---------YAB1 <---------AHL20(2)   ctgttttcaagtatttaatttatacttaaattttgttattaaaaaagttatatcatcgttggtcaattggacatgatttgaaagtattttaaaatatgat  923000                                                                     --------->ARR14(2)                                                                     --------->ARR11(3)                                                                     <---------ARR14(2)    --------->ANAC46                                                <---------GLK1(1)  --------->ANAC46                 <---------ICU4                   --------->GLK1(1)  --------->ANAC58              --------->YAB1                     <---------ARR11(3)  --------->ANAC58         --------->TOE1(3)             <---------O2<---------ARR11(3) ---------ALFIN1           <----------DOF2            <------ZmHOX2a(2)           ------->TEIL ------->ANAC46            --------->TOE2(3)<---------ARR11(3)     --------->ARR11(3) -->YAB1          --------->ARR11(3)        <---------AHL20(1)    <------ZmHOX2a(1)         <-------- --YAB1        --------->YAB1  >>>>>>>>>MYB98         ===================HOX2a_HOX2a   <---------ARR11(3)   caccacacaaaattgaagaataacttgaactttaacataatgtcaatatactttcgatcacgttggaaggatatctacaaaatgaacttgatattttttt  923100                    --------->At4g35610      ------>ZmHOX2a(2)                                                                           ---    --------->ARR11(3)              <---------AHL20(2)                                           <---    <---------ARR11(3)  <---------YAB1                                                      --------- -AHL20(2)          <---------At4g35610                                                    ----------   tgctatgatctatcgttttatcagctatgtttgtgggtttaatttcgatgttgttaacagtgtctagtagtacatatgccatctataactcgaaaaagct  923200                          <---------ARR11(3)                  <---------ANAC58        <---------YAB1                  <---------ANAC58      <---------ICU4                 --------->At4g35610    --------->YAB1            <---------YAB1--------->GLK1(2) ------>REM1(1)  <---------At4g35610   --------->ICU4 ----TEIL --------->CCA1(2)       ----------->GT1            <-----------RAV1(1) >DAG2   --------->ARR14(2)       --------->YAB1             --------->ALFIN1                 <------ >DOF2   <---------ARR14(2) --------->TOE2(3) ------>ZmHOX2a(2)   ---------->ID1              <------   acatctaagtggatatgatagcttacaaaatctaaatcgtaaacatgatcgctaacctcacaagtgttgtcgttttccatcgctctgttatagtcatagg  923300                                                                                    --------->ARR14(2)                                                                                    <---------ARR11(1)                                                                                    <---------ARR14(2)                                                                                    <---------ARR11(3)                                                                                   <---------ARR14(1)                                                                                   <---------CCA1(2)                                                                                   ------>MYB46(1)                                                                                 --------->AtMYB61                                                                                --------->MYB46(3)                                                                               --------->ANAC58                                                                               ------>MYB83                                                                     <---------AtMYB61                                                     <---------AHL20(1)        -------->P                                                     <---------AHL20(2)        ------>MYB46(1)          --------->ATHB12                           --------->AHL20(1)    <---------PCF2          <---------AHL20(2)                         --------->AHL20(2)   ----------->TCP11(1)         <---------AHL20(2)  --------->YAB1         --------->AHL20(2)<------MYB46(1)      <---------AHL20(2)     --------->TOE2(3) ------------>CBF      --------->MYB111(1)   <---------     <---------AHL20(2)     ----------->GT1   ----------->RAV1(1)--------->ATHB12------->GAMYB      < ---TOE1(2)  --------------->AtSPL8 <-----------GT1 <---------AHL20(2)<------MYB83 ------>MYB83 <---- ---TOE2(2)  <---------------AtSPL8 <---------AHL20(2)        <------------CBF --------->ANAC58------   ttgtttttttatttattggtacaaaatagaatgttaatttacttagcccaacaattaaattttctattgatttggtgggccaaccaaatctttttactaa  923400         -------->ATHB1         <---------ICU4         --------->YAB1                                                                            --        <---------ATHB12            <XXXXXXXXXXXXXXXXXXXXMIR830                              <------ZmHOX2a(2)    ------------>CBF         <----------DOF2                                                <-------- --GT1--------->WOX13(1)  *TSS     <<<<<<<<<TBF1                                            --------- --------P             --------->ANAC58                                                     ------->TEIL -----TOE2(3)          --------->ANAC46                  <---------GLK1(2)       ----------->GT1   <- --->MYB52(1)          --------->ANAC58 --------->HSFB2a(2)                    <---------LBD16------>ZmHOX2a(2)   gggttagccaatcattcattccaccacgaaacttttcttcttctcaaactagtttttcagaatttctagggtttttgaaattggggaaaaaatggatccc  923500                                                                                          --------->At4g35610                                                                                     --------->ARR14(2)                                                                                     <---------GLK1(2)                                                                                  <---------ANAC46                                                                                 --------->ATERF1(1)                                                                                 <------NtERF2                                                                                 <---------LBD16                                                                                <---------ATERF1(1)                                                                                <---------DEAR4(2)                                                                                <---------ORA47(2)                                             ------>ZmHOX2a(2)                  --------->LBD16                                            <---------GLK1(1)                   ------>NtERF2                                            --------->GLK1(1)                  <---------RAP2.3(2)                                            <------ZmHOX2a(2)                  <---------DEAR3(1)                                           <-----------ARR10                   <---------ATERF1(2)                                           --------->ARR14(2)                  --------->ATERF1(2)                                           <---------AGP1                      <---------RAP2.6(2)                                           <---------ARR11(3)          --------->ATHB12   <---------At4g35610             --------->ARR14(2)            --------->ARR11(3)     <------NtERF2--------->DEAR3(1)             <---------ARR14(2)            <---------ARR14(2)     <---------RAP2.6(3)<---------ARR14(2)        <---------bZIP60(1)                <---------ARR14(3)--------->ANAC58  <---------RAP2.3(3)      --------->ZAT14                     <---------CCA1(2)  --------->ANAC58 --------->DEAR3(2) ------->ARR14(2)                 <---------WOX13(1)     --------->ANAC58     <---------LBD16  <----- -ARR14(2)   --------->ARR11(1)--------->ALFIN1          --------->ANAC58     --------->ATERF1(1) >ARR14(2) <---------ETT(2)<-----------RAV1(2)           --------->ANAC46    <---------At4g35610 --------ARR14(2) <-------GAMYB----------->HVH21  <----------DOF2--------->RAP2.6(2)<------NtERF2<---   aaatccagtgatgtcgatacggttgagcccgaggtgatggacgcagatctctctttgaaacgcaaggccgaaacgattgagccggcggattccgatgaag  923600           <------ZmHOX2a(1)       <-----------RAV1(2)                                      ---------     <------ZmHOX2a(1)         --------->WRKY38(1)                                      ------->TEIL <---------ANAC46              --------->WRKY12      --------->MYB52(2)         ----------->RAV1(2) ----TOE2(3)                   ----------->HVH21   <---------MYB52(1)           <------NtERF2     <-- ---ZmHOX2a(1)          ---------->DOF2--------->ALFIN1                     <-----------HVH21 ------>ZmHOX2a(1)   gatgcgaggaagaggagagaaacagtgaaagcgatgaccaggtttggggtttcgatagtttcgaaggctcagactacgagtcgcctgatgagcctcctga  923700                               --------->ANAC46                               --------->ANAC58                               --------->ANAC58                              <-------MYC3                            --------->CCA1(2)                              <-------MYC2                            <------ZmHOX2a(2)                              ------->MYC3                           <---------AGP1                              ------->MYC2                           --------->ARR11(3)                             --------->ANAC58                        <---------ARR11(3)                             --------->ANAC58                        --------->AGP1--------->WOX13(1)                             --------->ANAC46                        --------->ARR14(2)                   <---------ANAC58                                  <---------ARR14(2)        <---------ARR14(2)<---------REM1(2)                        ----------->ARR10  --------->YAB1       <------ZmHOX2a(1) --------->CCA1(2)                <---------ANAC46       <---------ATHB12 -->RAV1(2)        <---------ANAC46       --------->ANAC46----------->GT1--------->At4g35610 ----ZmHOX2a(1)    <---------ANAC58       --------->O2   ---------->ID1------>ZmHOX2a(2)      -------   ggatgatgaggaattggagtttcgtcgatacacgcgctattaccacgagagcaaggtttgtcgtaaaattagatctgctctccatcaatcttggtataaa  923800                                                                     --------->ANAC58                                                                     --------->ANAC58                                                                     --------->ANAC46                 <-------GAMYB                                    ---------->TaMYB80                <---------MYB46(3)                            --------->ANAC55(2)                --------->MYB55(2)                            <---------ANAC55(2)               --------->ALFIN1                               --------->ANAC58             <---------ANAC46                            --------->MYB52(2)       <---------HSFB2a(2)            <---------DEAR3(1)                           <---------MYB46(3)      ------>ZmHOX2a(2)           --------->ZAT14                     ------>ZmHOX2a(1)  --------->ARR14(2)      ------>NtERF2           <---------ZAT14               --------->HSFC1(2)   --------->ANAC58 <---------AGP1       -     --------->TOE2(3)                   <---------HSFC1(2)  <---------LBD16   --------->ARR14(2)   -   ------->TEIL<---------AtMYB61         --------->At4g35610<-----------GT1    <---------ARR14(2)   - --->DOF2  --------->ZAT18    ---------->DOF2 --------->TOE2(3)   <---------ARR14(2)   <---------ATERF1(1)   gcttgaacctttgtgcggtggttacagggtttcaaagtggataagcttcctaaacatgtttgttacggaatacgccctctcgatctggatgcccccttct  923900  Previous    Next  AGI:  At1g03710.1    Description:  cysteine protease inhibitor. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G17110.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525); contains InterPro domain Proteinase inhibitor I25A and I25B, type 2 and phytocystatins; (InterPro:IPR003243) Range:  from: 923426    to: 924726    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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