Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <-------MYC2                                               ------->MYC2                                               <-------MYC3                                               ------->MYC3                                               <-------MYC4                                               ------->MYC4            <---------ANAC58                                  --------->SPL7        >>>>>>>>>>>>>>>>>LFY                                 <------NtERF2<---------TGA1a          <---------ANAC58             --------->WRKY12    ------>NtERF2--------->TGA1a      <---------ZAT14   --------->GLK1(2)            ----------->HVH21    --------->At4g35610   <-----------ARR10            <---------SPL7<---------O2        <---------ANAC46                 <-  <---------GLK1(2)      <---------GLK1(1) <-------TEIL--------->RAP2.6(2)                    ------- --ZmHOX2a(1)----------->HVH21<---------LBD16 --------->O2      <---------ANAC46           --------->ANAC58 -ANAC46 <---------CCA1(2)    --------->At4g35610    <---------At4g35610                   --------->ANAC58   aagcgattctcatctctgaccggatagaaatcggcggacgggaagtacacgtgtaagcagccattgttgtgtagcgagagaagagatagagagaagcaat  917900              <-------TEIL             --------->ARR14(1)            <---------GLK1(2)                                                                 -------      --------->ANAC58                                                                      ---------      --------->ANAC58                                                           --------->ANAC58      --------->ANAC46                             --------->MYB52(1)            --------->ANAC46    --------->ANAC46                       --------->YAB1                        --------->ANAC58  --------->ANAC46                         --------->AHL20(2)                   --------->LBD16 --------REM1(2)                           <---------ICU4                     --------->TOE1(2) -->WOX13(1)--------->ARR11(1)       ----------->GT1                          --------->TOE2(2)  <---   ctacacacacgatagattcgatttcttcttgagtcccaaatgtaataatatccaaacgaagaagatgaacaaaaacaaaacccacgaaaatgagagatag  918000                                                                               --------->AHL20(2)                                                                               <---------AHL20(1)                                                                               <---------AHL20(2)                                                                               --------->AHL20(1)                                                                           <---------AHL20(2)                                          <----------DOF2        <---------AHL20(2)                                       <-----------GT1          --------->AHL20(2)                           <---------TOE2(3)                    *TSS      --------->AHL20(2) -->CCA1(2)      <---------WOX13(1)<----------DOF2          <---------AHL20(2)--------->AHL20(2) >CCA1(2)  <------ZmHOX2a(1) <------ZmHOX2a(1)              --------->AHL20(2)<---------AHL20(2)  <-- ---ZmHOX2a(1)----------->HVH21    ------>ZmHOX2a(1)<---------YAB1 <-----------GT1       <---------YAB1   gagaagattaagaggagtgactgattttttaggaatccttttttctttagagctactattgtttaattttatccgattaaataaattccctattattcaa  918100                           ---------->DOF2                 <------NtERF2                <---------At4g35610                <------NtERF2               --------->RAP2.3(2)                                              --------->AHL20(2)               ----------->RAV1(1)    <---------TOE2(3)                      --------->WOX13(1)    --        <------------CBF--------->TOE2(3)    ---------->ID1     <---------AHL20(2)                <--    --------->ZAT6    <-------TEIL   --------->YAB1<---------LBD16         --------->MYB46(3)   ----- -------ARR11(3)--------->LBD16      --------->AHL20(2)         --------->AHL20(2)      <---------ANAC46   gctctaagactattgggccgcagtttcattaaagcccattaatatttctcgttttcggaaaaacaaaaaattatcgaaccaattaacttgaagtgtatca  918200                                                                                 --------->HSFB2a(2)                                                                      --------->YAB1                                                                      <---------ICU4                                                                      -------->ATHB1                                                                     --------->ICU4                                                                     --------->AHL20(2)                                                                     <---------AHL20(2)                                                                     <---------ATHB51                                                                  --------->AHL20(2)           --------->ZAT18                                        --------->AHL20(1)         <---------At4g35610                                      <---------AHL20(2)      ---------->DOF2                                     --------->LBD16        <---------HSFB2a(2) <---------TOE1(3)                   ------------>CBF    --------->ANAC46      ------>ZmHOX2a(1) <---------TOE2(3)              ---------->DOF2          ----------->GT1 <---------ICU4 ------->YAB1                --------->TOE2(3)       -------->P  <---------AHL20(2)                *TSS -------ATHB12             <-------TEIL         <-----------GT1  --------->AHL20(2)            ------ ---->WOX13(1)         --------->MYB52(2) --------->YAB1<---------LBD16 <---------YAB1        -------   atcaaggttaaagctcactgggccttagtttcattaaagcccaatagtattcacttaccccgtaaaattaaattattattcctcgagaagcccaaacagt  918300                                                                  <---------MYB52(1)                                                                 --------->At5g28300                                                                --------->RRTF1(3)                                                                --------->RRTF1(2)                                                                --------->RAP2.6(2)                                                                --------->RAP2.3(2)                                                               --------->RAP2.3(1)                                                              --------->ABI4(1)                                                             --------->DEAR3(1)               <------                                    --------->GLK1(1)        --------->ANAC46                 <------       <---------ANAC58     --------->LBD16                <---------At5g28300  <---------MYB52(1)       <---------ANAC58    --------->ANAC46               <-----------GT1     <---------MYB46(3)      <-------TEIL      --------->ARR14(2)              <-----------HVH21   <---------At4g35610 --->At5g28300          --------->GLK1(2)    <-----------HVH21------>NtERF2 <---------ZAT2    <------ ---->GT1               <---------ARR14(2)  --------->ANAC46--------->MYB46(3)<-----------RAV1(1) <--   aaaaacgatgcgttgtatcgctggagcatccgtagccgatttctctccgtcgctactgtttcaccgccgtaatctcgtagctgttggccagagattgctt  918400                                                                                     <-----------HVH21                                                                                     <---------SPL7                                                                                     <---------ARR14(2)                                                                                    <---------ANAC58                                                                                    <---------ANAC58                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                                             <------NtERF2                                                                            --------->LBD16      ------>ZmHOX2a(1)                                                    <---------ANAC46 ---ANAC58                                                                <---------LBD16 ---ANAC46                                                              --------->ALFIN1  <---------MYB52(1) ---ANAC58     <---------ANAC58 <---------ARR14(2)                   <------ZmHOX2a(1)   --------->LBD16 -------YAB1   <---------ANAC58 --------->GLK1(1)       --------->YAB1--------->ALFIN1 --------->SPL7   atgacttcctcgattttgcgttctcatacgagggaattcgacgtttgcgatgaaggaatcatctcggtagaggagtggcggaaatggggtccggtgtctc  918500                    <---------GLK1(2)             <---------WRKY12                <---------ANAC58            <---------AtMYB61            --------->WRKY18(1)              <---------ANAC46        <---------GLK1(2)           <--------ZAP1                  <---------HSFB2a(2)        <---------ARR11(3)   --------->ANAC58           --------->At5g28300            --------->HSFB2a(2)        --------->ARR11(3)   --------->ANAC58           <-----------HVH21             <---------LBD16 <---------ARR14(2)            <------NtERF2        <---------LBD16                --------->ARR11(3)--------->ARR14(2)       --------->ICU4        --------->At4g35610        ---------->DOF2       <---------GLK1(2)        <---------AtMYB61        --------->LBD16      --------->ATHB12<---------ANAC58    <---------MYB52(1) xxxxxxxxxxxxxxxxx   catttccatccgcggtcaaacagattgtggatgatttgaaagttctggagtgcaaattggattctccgatagattttggtggtaatggtggcaagttaca  918600                      <---------ICU4                     --------->ICU4                   --------->YAB1                  <---------YAB1                  --------->ICU4                    <---------ATHB12                --------->YAB1                <----------DOF2                                      <-         --------->WRKY38(1)              <-----------GT1     <---------ANAC58                     --       <---------At4g35610           <---------ANAC58         <---------ANAC58 <----------DOF2     --       --------->At4g35610           <---------ANAC58         <---------AtLEC2<---------ANAC58     -- >smallRNA(si3)<---------YAB1        <---------ANAC46       <---------YAB1    <---------ANAC58  <----   ggtaaatgccgatgactatcatgataatgaaacctcgttgcttgtttcctttcaatcgttttatgcttggattgtttagtgctttctattggataactat  918700                                                                    --------->ALFIN1                                                                  <-----------RAV1(1)                                                                 ------->TEIL                                                              <---------ANAC55(1)                                             <---------CCA1(1)<---------ANAC58                                             <---------RVE1(1)<---------ANAC58                                            <---------ARR11(3)--------->ANAC55(2)        ----------->GT1                     --------->ARR11(3)<---------ANAC46                <------ --------ARR14(2)                         --------->MYB59     <---------ANAC55(2)             <------ ------->ARR14(2)                         ----------->ARR10  <-----------------------TaNAC69(2) ------->GLK1(2)                   --------->TOE2(3)    <---------TOE2(3)            <---------MYB46(3) ----->TEIL                        <---------MYB59      <---------YAB1         >>>>>>>>>>>>>>>>>LFY -----YAB1   --------->ICU4        --------->TOE2(2)    <---------TOE1(3)      <<<<<<<<<<<<<<<<<LFY   gaatctggttttgtaatttttgtgttcaaactagtaacctaagttagatatttgagctatggttacgtatgtggtgctatgtgccagtggtttctgactt  918800  Previous    Next  AGI:  At1g03680.1    Description:  ATHM1 (Arabidopsis thioredoxin M-type 1); thiol-disulfide exchange intermediate. Identical to Thioredoxin M-type 1, chloroplast precursor [Arabidopsis Thaliana] (GB:O48737); similar to ATHM2 (Arabidopsis thioredoxin M-type 2), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT4G03520.1); similar to Thioredoxin M-type, chloroplast precursor (Trx-M) (GB:Q9XGS0); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); Range:  from: 916818    to: 918064    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g03687.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO69730.1); contains InterPro domain DTW (InterPro:IPR005636) Range:  from: 918299    to: 920507    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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