Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------->AtMYB61                              ------>MYB83                              -------->P                             ----------->RAV1(1)                            --------->AtMYB61                           --------->MYB46(3)                     --------->ANAC46                     --------->ANAC58           --------->AHL20(1) ---------ARR11(3)   --------->ANAC58           --------->ARR11(3) -------->ARR11(3)  <---------TOE1(2)<---------ARR14(2)  --------->ZAT18 ---->GT1          ------>ZmHOX2a(1) --------->ARR14(2)  <---------ZAT14               <------ZmHOX2a(1) ->DAG2           --------->TOE1(2) ------>MYB46(1)      <---------ZAT18     --------->YAB1 >DOF2            --------->TOE2(2) ------>MYB83<---------AHL20(1)     --------->YAB1<---------TOE2(3) ---AG<---------ETT(2)    >>>>>>>>>MYB2  ------>ZmHOX2a(1)      --------->DAG2  --------->ATHB12 ---AGL1    --------->AHL20(2)------>MYB46(1)--------->AHL20(2)---------->DOF2 <---------YAB1       >   aacatctttcgacataaaatcctacgaaaaccaacaccaaatcctgtttatatattgagttcacataaagctctaataaacatcattgaggaagaacaag  896000                            <---------ANAC46                            <---------ANAC58                            <---------ANAC58                       -------->ATHB1                       <--------ATHB1                       --------->ATHB12                       --------->ATHB51                       --------->YAB1                                               <----------DOF2                       <---------ICU4                                     --------->GLK1(1)                       <------------ATHB5                                --------->ARR11(3)                      --------->ICU4                                     <---------ARR11(3)                      <---------YAB1<---------WOX13(1)     <---------ANAC58    ======================                      <---------ATHB12                     <---------ANAC58    ------>ZmHOX2a(1)                   ------------>ATHB5   <-----------GT1    ----------->GT1<---------GLK1(1)                 --------->ANAC58------>ZmHOX2a(1)         <---------ANAC46  ----------->RAV1(2)    <                 --------->ANAC46--------->ICU4 <---------ANAC58       --------->ANAC58           --- >>>>>>>>TBF1    --------->ANAC58<---------YAB1 <---------ANAC58       --------->ANAC58          <---   aagaagaaactcacttcccacacaatcattgcgtcctgattaatacccttgcgtccctgttgagtgaaaatgcaagaactcctgctctttccattcccaa  896100        <---------ANAC46       --------->MYB59    <---------GLK1(2)    --------->ARR14(2)    <---------ARR14(2) ------>ZmHOX2a(2) =======HOX2a_HOX2a                                                          --------->ANAC46  ------ -----------------AGL1                                                     --------->ANAC46 --------- ------>YAB1                                                            --------->PCF2      --------- ------ATHB12                ----------->GT1                          <---------At4g35610   ---------   tgatccgattcggtatagaaaccaagttatgaagtgaaaccatgcggtctgaaaaacctctcttccccattttgctcccacaacatcccatcccaagaca  896200                                                                                ------>ZmHOX2a(2)                                                                               <---------At4g35610                                                         <---------WRKY38(1)   <------ZmHOX2a(2)                                                         <---------WRKY12     <---------AGP1                                                ------>MYB46(1)               <---------ARR14(2)                                                <<<<<<<<<<<<<<<<<LFY          --------->ARR14(2)                                                >>>>>>>>>>>>>>>>>LFY          ------->TEIL     <-------TEIL                               ------>MYB83          --------->ANAC46 <---------DEAR3(1)        --------->ANAC46   ------->GAMYB --------->AtLEC2  <-----------ARR10 --->CCA1(2)               --------->O2       --------->AtMYB61    --------->ZAT14 >ANAC58                 <---------ALFIN1<-------TEIL   --------->WRKY18(1)   --------->GLK1(2) >ANAC46         <---------ICU4<---------ZAT6--------->MYB46(3)    --------->ARR14(2)------>ZmHOX2a(2) >ANAC58         --------->ATHB12       --------->CCA1(2)<---------WRKY45--------->MYB52(1)    ------   tgggcgatgcataggctcttcattgctccacgagtcttagagatacaacctcccattggtcaatgcaagtatacacaacggatctgatcgcagagagatt  896300                                    <------ZmHOX2a(2)                                   <---------ARR11(3)                                   --------->AGP1                                   <---------ARR14(2)                                   --------->ARR14(2)                             --------->ARR11(3)                                   --------->ARR11(3)                         ---------->DOF2                                   --------->ARR14(3)                       <---------ATHB12                                   <---------ARR14(3)                   <---------WRKY38(1)                                   <---------GLK1(2)                   <<<<<<<<<<WRKY43                         ----------------->AGL2                        <<<<<<<<<<WRKY26   --------->ANAC58                     <---------REM1(1)                                 <<<<<<<<<<WRKY38   --------->ANAC58                    <---------------AtSPL3                           ----------->GT1      --------->ANAC46                    --------------->AtSPL8           <----------DOF2 <------MYB46(1)  <-----------HVH21   ---------->DOF2  <---------------AtSPL8     ---------->DOF2       <------MYB83 <---------ARR11(3) --->CCA1(2)      <-----------RAV1(1)------>ZmHOX2a(2)              --------->MYB59  <----------DOF2<   tgagaaaaagaagacttctattgttgtaccaaaaccagatcccccaatgtaaaggcttttagcaacttatttggtcaaatcaaagagctttcacacaagt  896400                                                            <---------YAB1                                                          --------->YAB1                                                          <---------ICU4                                                         --------->ICU4      <---------ZAT2                                                         <---------ATHB12    --------->ZAT2                                                      <---------WRKY38(1)    --------->At4g35610                                                      <---------WRKY12       <---------At4g35610                                              --------->ARR11(3)          <---------MYB52(1)                                              <---------ARR14(2)    --------->WRKY38(1)                                       *TSS  <---------CCA1(2)   <---------AtLEC2     <------------CBF            --------->AHL20(2)     <---------DAG2    ------------>CBF ------->TEIL   <---------ICU4 ----------DOF2      <----------DOF2<----------DOF2  --------->WRKY18(1) <-----------HVH21         --   ttctttattctatataaaatactctttgtgggcaaaaccttttcttcaaatcttggtcaatgatgatgcatggaccgtgagctgaaaacattgcagaaaa  896500                <------------CBF               --------->ATHB12                            ---------->DOF2              --------->AHL20(1)                          --------->ICU4              <---------AHL20(1)                     --------->ANAC58              <---------AHL20(2)                 --------->ANAC58              --------->AHL20(2)             --------->ANAC58                       <----------DOF2           <---------AHL20(2)                --------->RAP2.6(2)                   ------>ZmHOX2a(2)          <---------AHL20(2)                 --------->ANAC46                    <---------ARR11(3)          --------->AHL20(2)                 --------->ANAC58                    --------->ARR11(3)         <---------WOX13(1)     ---------->DOF2  --------->ANAC58             <-------MYC3       --------->ATHB12----------->GT1--------->DAG2 --------->ANAC46         ------->MYC3 ------->AHL20(2)    ---------->DOF2 ---------->DOF2 --------->ANAC58     <---------ZAT2   atgaattagtgattaatttattgcaaagttacaaaaaagaaaagcagacgcaaacaagtcataaagaagaaaacccagcatgtgatctttagcaatagaa  896600                                                                                               ------                                                                                          <----------DOF2                                                                                          <---------DAG2                                                  --------->TOE1(3)                    <-----------GT1                                                  --------->TOE2(3)               <---------AHL20(1)                                                -------->P                        --------->AHL20(1)                                                ------>MYB46(1)                   --------->ARR11(3)                           <---------YAB1       ------>MYB83<---------YAB1        --------->AHL20(2)          <-----------GT1  --------->ICU4     --------->MYB46(3)                  <---------ARR11(3)      <---------ARR11(3)   ------>ZmHOX2a(1)  --------->AtMYB61                   <---------AHL20(2)      --------->ARR11(3)  <---------MYB59     <---------MYB59               ----------->GT1  <-------   tatatgtagatattactaaacagcctgtcctaattgtttggcattggaccaaccttaagactcttatagctccatgttttgtaatatattcacttttcat  896700                   --------->YAB1                --------->WOX13(1)               <---------AHL20(2)           --------->AHL20(2)                                                                     ---           <---------AHL20(1)                                                                    <---           --------->AHL20(1)                                                                <-------           <---------AHL20(2)                <------ZmHOX2a(1)                       ------>ZmHOX2a(1) <---------ICU4--------->AHL20(2)    --------->At4g35610                         --------->ARR14(2) --->TOE2(3)  --------->AHL20(2)   --------->YAB1                                <---------ARR14(2) --YAB1   --------->AHL20(2)     --------->GLK1(2)                <---------ATHB12  --------->TOE2(3)   taatctttgctaataaattaatcaaaacacttaagaatcagaagacaggaaaacaaaataacatacaaatcaagaacagagagtttcctcaaatgtctta  896800                        <-------MYC3                                                           ------ <---------ICU4         ------->MYC3                                                         <------- ------>YAB1  ------->TEIL                                                                   -------- ------YAB1<---------ANAC55(2)                                        --------->AtLEC2 <---------TOE2(3) --ANAC46  --------->ANAC55(2)   ----------->GT1 <-----------GT1 <-----------GT1 <---------TOE2(3)   taataagcacatcatgtatccaaacacatgttatgaggcaaattgcaagattaactactgaaacaagtttccatacaactcttgacgttaagaaaacgtg  896900  Previous    Next  AGI:  At1g03590.1    Description:  protein phosphatase 2C family protein / PP2C family protein. similar to protein phosphatase 2C family protein / PP2C family protein [Arabidopsis thaliana] (TAIR:AT4G03415.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68594.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 894254    to: 896439    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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