Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      --------->YAB1 --------AHL20(2)                                                       <-----------GT1       ------- ------>AHL20(2)                  ---------->DOF2        <---------AHL20(2)        <---------YAB1 ---YAB1                        <---------YAB1          --------->AHL20(2)       --------->YAB1    --   taaaattgctagatgagagacattggttttgttgatgaaagaaactacttgttttagatttatttctaaatgtttttcttcatttatcatgaacaacacc  835400                           <------MYB46(1)                           <------MYB83                        --------->DAG2                          <---------AtMYB61      <---------ANAC46                          --------->MYB55(2) <---------DAG2   ---------->DOF2                          --------->MYB59    <----------DOF2 <---------ATHB12                          <---------MYB46(3) <---------------AGL15            <---------TOE2(3)  <---------SPL7--------------->AGL15                                <-- ---->RAV1(1)           --------------------->WRI1 --------->ALFIN1                 --------->ANAC46 ------->AHL20(2)       <---------MYB52(1)  <-----------------AGL3                  --------->ANAC55(2)   ataaattgacatatgaggtttgtatcgtttggtcgtatcgaaatttgctttatgtggagagcaataaagtagtagtatgtgagtataggtaacccaaatt  835500                      <----------DOF2                      <---------DAG2            <---------AHL20(2)           --------->ARR11(3)                                                       --------->AHL20(2)           --------->AHL20(1)        --------->ANAC58                               <---------AHL20(2)           <---------AHL20(1)        --------->ANAC58                              --------->YAB1           <---------AHL20(2)      <---------ANAC58                            <---------YAB1           <---------ARR11(3)<---------ARR14(2)                    <----------DOF2<---------YAB1           --------->AHL20(2)--------->ARR11(3)  <---------HSFB2a(2)   <---------TOE2(3)           --          --------->AHL20(2)<---------CCA1(2)    --------->HSFB2a(2)   <---------TOE1(3)           <- ---------GT1      <-----------GT1 <---------ANAC58          <----------DOF2   --------->ICU4<-------   tgaccattacaaatatatttgtaactttttatatctggcgagccataggttctacaagttaatcttttggtttaaggtgagattattaaaatttttaact  835600     <------ZmHOX2a(2)              <----------ID1    <---------ARR14(2)          ---------->DOF2                                      --------->RAP2.6(2)    --------->ARR14(2)  <----------DOF2         ----------->GT1                      <---------ANAC46 ------->ARR14(2)       <---------DAG2         --------->DAG2                 <-----------HVH21 --------ARR14(2)    <-----------GT1----------->GT1     ----------->GT1    ---------->DOF2          - ----GT1           <---------MYB52(1)         ---------->DOF2   ---------->DOF2      ----------->GT1<   aaatccgatccaaaattatctgttaacttttttttaaagagaaaaaaaaaaagtaaaattgaaaaaaaaagaagttggaaagtcaggccgtataaaactg  835700                                  --------->AHL20(2)                                  --------->AHL20(1)                                 <---------CCA1(2)                                    <------------CBF                            <-----------GT1                                         <---------AHL20(2)                          <---------YAB1           <---------ATHB12             <------NtERF2       ----------->GT1  <---------ICU4    --------->AHL20(2)                   --------->LBD16      --------->DAG2   <---------YAB1     <---------AHL20(2)                   ----------->GT1     ---------->DOF2   --------->ICU4 --------->AHL20(2)                      <---------ANAC46  ----- -------->AHL20(2)   --------->YAB1  <---------AHL20(2)     ----------->GT1  <---------LBD16   <----- ---------AHL20(2)  --------->ICU4<---------ARR11(3)--------->YAB1     --------->AHL20(2)      <-----   aataaaataaagtaacaagagaatgatgattatccatatattatttaaatcaaatgataagtctgtaaaaaaaaaaaatggcggaaaaaattggattaag  835800                                                                                                   <-                                                                                                <----                                                                                               ------                                                                                              <------ZmHOX2a(2)                                                                                              <------        <---------DAG2                                                                       --------        <----------DOF2                                                                      -------- ------>GT1                                                                                  <------- ----TOE2(3)             *TSS                                                               --------- ----TOE1(3)          ---------->DOF2                            ----------->RAV1(1)        <--------   gtgaaaatcgctttctctgaaaatcaaagacgaacgagtaagagagaagtagtagacgagaagacaacaacaaaaatttgagagagagagagagagatct  835900                                                                                             <-------GAMYB                                                                                            <--------                                                          <---------GLK1(2)                 --------- --------YAB1                                             --------->ARR14(2)              <-------GAMYB ------DOF2                                               <---------ARR14(2)              <---------MYB52(1) >ZmHOX2a(2)                                       <-------TEIL                          <---------MYB46(3) ---RVE1(1)                                       <------ZmHOX2a(2)                      <---------DEAR3(2) ->AGP1                                          --------->ARR11(3)                     <---------DREB2C(2) ->ARR11(3)                                      --------->AGP1 <---------YAB1          <---------DEAR3(1) --ARR11(3)      --------->ZAT14                 <---------ARR11(3)                     <---------At1g77200 >GLK1(1)        <---------ZAT14                <---------GLK1(1)            <---------CCA1(2) -GLK1(1)    --------->ZAT6                     --------->GLK1(1)--------->YAB1    <---------MYB52(1)   tttgattcaagtcaaacactactcagaagttttctcatcggtatcgagagagatccatcggattctatcatcggatgttatatctgttcgtcggtggtta  836000                   --------->MYB55(2)                   <------MYB46(1)                   <------MYB83                   <---------DEAR3(2)                   <---------MYB46(3)                 <--------P                <-------GAMYB                                         <---------MYB46(3)               <---------MYB46(3)                                  <---------DEAR3(2)               --------->MYB55(2)                                  <---------MYB46(3)              -------------->OsCBT                                 --------->MYB55(2)             --------->LBD16                                      <---------ANAC46            <---------ANAC58              --------->ALFIN1        <---------ANAC58     --------->CCA1(2)                   <-----------HVH21        <---------DEAR3(1)     <----------TaMYB80                 <---------At4g35610       <---------ANAC58     <---------GLK1(1)                  <---------DEAR3(2)        <---------DREB2C(2)     --------->GLK1(1)                  --------->At4g35610      <------NtERF2    <---------ARR11(3)           --------->MYB52(2)             <---------ERF1    <---------ARR14(2)     <---------ANAC58                    <---------DEAR3(1)    --------->ARR14(2)     <---------ANAC58                    --------->ALFIN1    --------->ARR11(3)    <---------DEAR3(1)     <---------At4g35610 <--------P    ---------->TaMYB80  <---------LBD16<---------MYB46(3)    <---------MYB46(3)   <------ZmHOX2a(1)   <---------LBD16 <---------DEAR3(1)   <---------AtMYB61                <------- <---------TOE1(2)<---------AtMYB61   <---------ORA47(1) --------->ICU4      ------>ZmHOX2a(2)    <-- <---------TOE2(2)--------->MYB111(1) <---------ANAC46   <---------YAB1  <---------YAB1      <------- -MYB46(3)  <---------ANAC46  <-------GAMYB      --------->At4g35610<-------GAMYB            <------- >MYB55(2)  <---------ANAC58 --------->ALFIN1  <-----------RAV1(2)<---------RAP2.6(2)    ---------->DOF2   tcggaggatatgctccgtggttggttcgggggtgttagtggccggtgaggcagatggtgatgatggtggcggttgatgatcgacaaaattagaaagcgtg  836100                                                                                              <------                                                                                              -------                                                                                           <---------MYB59                         ---------->ID1                                            <---------ANAC58 --ANAC46   <---------ANAC46                                                       <---------ANAC46 ----------------------ANAC81          <---------AtMYB61                   <<<<<<<<<<<<<<<<<LFY --ANAC58   <---------ANAC58   <---------TOE1(2)                       ---------->DOF2  <-----------GT1 --ANAC58   <---------ANAC58 <---------MYB52(1)                   ---------->DOF2  <---------ANAC58<-   ttttcttatttgtttcgttttgagtttgtctcttaggtgttttggtagtagaagatgatgaagaaggggaaaggaaagaacagtggcttgttaccgaatt  836200                                                ------>MYB83                                                ------>MYB46(1)                                              --------->AtMYB61                                              --------->DEAR3(1)                                             --------->MYB46(3)               --------->ATERF1(1)                                             <---------MYB52(2)              <---------ATERF1(1)                                            ------>NtERF2                    ------>NtERF2          --------->ARR11(3)               --------->DEAR3(1)          ----------->RAV1(2)          <---------ARR11(3)             <-----------TGA1        <---------MYB46(3)         <---------CCA1(2)              --------->ANAC58         --------->MYB52(2)       --------->AHL20(2)               --------->ANAC58       <---------MYB52(1)   <---------MYB52(1)   <---------TOE1(3)                    --------->ANAC46     <---------MYB46(3)    <-------GAMYB   <---------YAB1                  --------->At4g35610<---------ANAC58 --------->At4g35610   <---------TOE2(3)           <---------ARR14(2)     <---------ANAC46 --------->LBD16<---------At4g35610 ---GLK1(1)                    --------->ARR14(2)     <---------ANAC58 <---------At4g35610 <--------- -->GLK1(1)         --------->TOE2(3) <---------DOF5.7(2)    <---------DEAR3(2) ------>NtERF2    <--- ---------DOF2      --------->TOE1(3) --------->MYB52(1) <---------ANAC46<-----------RAV1(1)     ----   cctttaagattatatcttcttgccttaaaactgtatcggctaacgccaccaacgttgcgtcgtctgttcgttccgctggtgcctccgttgctgcttcaat  836300  Previous    Next  AGI:  At1g03370.1    Description:  C2 domain-containing protein / GRAM domain-containing protein. similar to C2 domain-containing protein / GRAM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50170.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G03000.2); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G03000.1); similar to hypothetical protein OsI_021844 [Oryza sativa (indica cultivar-group)] (GB:EAZ00612.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45075.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64252.1); contains InterPro domain GRAM (InterPro:IPR004182); cont Range:  from: 826569    to: 835361    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g03380.1    Description:  AtATG18g (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) g). similar to AtATG18h (Arabidopsis thaliana homolog of yeast autophagy 18 (ATG18) h) [Arabidopsis thaliana] (TAIR:AT1G54710.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64435.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22449.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80611.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 835825    to: 840891    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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