Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ----------->GT1                                                                     ---------->DOF2                                                            ---------->DOF2    <---------AtLEC2                                      <-------TEIL--------->DAG2    <---------ANAC58                           ---------->DOF2    <------ZmHOX2a(1)    <---------ANAC58           <---------At4g35610    <-----------------------TaNAC69(2)  <---------YAB1          <---------AtMYB61<---------At4g35610   <----------ID1 -------->CCA1(2)  <-----------GT1         --------->At4g35610  ----------->GT1       <---------DAG2 --------ARR11(3)  <-----------------AGL1 ------->TEIL<---------------AtSPL8          <----------DOF2 -TEIL    <------ZmHOX2a(2)    --------->At4g35610    --------------->AtSPL3     -------->P<---------   tgatatgcttggatcagagtttcacgttgtggtagcagagaatgaagctgaaagaagacgtacaaagaggaaaaagtgaaaactacccctttttgtcact  826200                              --------->KAN4(2)                                          --------->CCA1(2)                            <------ZmHOX2a(2)                                           --------->ARR11(3)                           --------->ARR11(3)                                         <---------TOE2(3)                 <---------ANAC58                                                  <---------WOX13(1)                 <---------ANAC55(1)                <---------ZAT2               --------->ATHB12                 <---------ANAC58                   --------->At4g35610   --------->AHL20(2)                 <---------ANAC46          <---------MYB46(3)             <---------AHL20(2)  ------->TEIL   <---------ANAC55(2)       --------->MYB52(2) ---------->DOF2   <---------YAB1    <-- --HVH21  <---------ANAC46 <---------ARR11(3)       <---------At4g35610  --------->YAB1 <---------ARR11(3)   gatgtatcagagacttgtaacgtgtattagatcattcggtcttgtttgttactcagcttctattgaaagttcgaattttaatctgattgagatatgtagt  826300                                                                 <---------RAP2.6(2)                                                                --------->ATERF1(1)       <---------AHL20(2)    ------->TEIL                                                --------->RAP2.6(3)--------->YAB1 <---------WOX13(1)    --------->ZAT6                   <----------DOF2     <----------DOF2 <-------- -------YAB1         <-----------GT1               --------->MYB59   <----------DOF2    ------->TEIL   atgatggatgtgtttgatactattaactgtacatcagattagattagtcgagttatgtcttttggagacggctttcttctttcattcatgaatttatcgg  826400                                                                           <----------DOF2                                                                          XXXXXXXXXXXXXXXXXXXXX>MIR853                                                                         <---------------AGL15                                                                         --------------->AGL15                                                                      --------->DEAR3(1)                                                                    --------->At4g35610                                    ------>ZmHOX2a(2)               <---------At4g35610                                   <------ZmHOX2a(2)              <-------TEIL                                  <-----------ARR10              --------->CCA1(2)                                  --------->ARR11(3)             --------->ARR14(1)                                  <---------ARR11(3)            <---------ARR14(2)                             ---------->DOF2                    --------->ARR11(1)                         <---------ANAC46                       <---------GLK1(2)                <---                      <---------MYB52(1)     <---------HSFB2a(2)--------->ARR14(2)              -----           --------->At4g35610    <---------ARR14(2)          ----------->ARR10                <-----    <----------DOF2<-------TEIL   --------->ARR14(2)        ---------->DOF2<---------DAG2      ------ ---GT1    <---------At4g35610   <------ZmHOX2a(1)  ----------->RAV1(1)------>NtERF2        ---------   tttcgacttttgtagctgaaattcgttttgtgaaaggatctacagttgcagaaacaacatagaaaagattcgctgccctttttagctcggagaagggata  826500                                       --------->MYB52(1)      --------->ICU4             --------->ANAC58                               --------->ZAT14 ---------CBF                    --------->ANAC46                      --------->ANAC58 ---->ATHB12                     --------->ANAC58    ------>MYB83      --------->ANAC46 ----YAB1                   --------->ARR14(2)       ------>MYB46(1)   --------->ANAC55(2) --->ICU4                   <---------ARR14(2)     <---------MYB46(2)  --------->ANAC58 -->GT1                     --------->GLK1(2)      <---------MYB59   *TSS       <---------ZAT14   attgggaaatgactaaaataccctcatgagaatccaagtaataacagcgattaccaaacctcttctctcattcacgaaacagtgttctacggccaatttc  826600                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                <----                                                                                    <---------YAB1---                                                                                  <----------DOF2<---                                                                                 <---------MYB52(1)--                                                                                --------->LBD16 -----                                                                               --------->LBD16 ------                                                                               --------->ANAC46------                                                                              <---------LBD16  ------                                                                      ------>ZmHOX2a(2)        ------                                                                     <------ZmHOX2a(2)         ------                                                                    <---------ARR11(3)        <------                                                                    --------->ARR11(3)        <------                                                                    <---------ARR14(2)        ------>NtERF2           <---------ALFIN1              <---------GLK1(1)          --------->ARR14(2)        -------          --------->ZAT14         <<<<<<<<<TBF1            ---------->ID1    >>>>>>>>>>E2Fb  <-------         <---------ALFIN1      <<<<<<<<<TBF1           <---------MYB52(1)  <-----------GT1  <--------   tctcgctcgctccacactcccaaaacaatattcttcttcttcgatttctcactctctgtttgtcgctaccgatcttatttcccgctatttttgttccggc  826700      --------->TOE1(3)      --------->TOE2(3) <---------MYB52(1) ----NtERF2 -->NtERF2 ----->ABI4(2) ------ATERF1(1) ---->DEAR3(1) -----DEAR3(1) ------>ATERF1(1) ------RAP2.3(1) ------->DEAR3(1) ---->RAP2.3(2)                                      <---------AHL20(2) --->RAP2.6(1)                                       --------->AHL20(2) --->ATERF1(1)                                  <----------DOF2                                    -- --->RRTF1(1)                              <---------RAP2.6(2)                   <---------ANAC58 <-- --->ERF1                                 <---------At5g28300                 <---------WOX13(1)  --- --->RAP2.3(1)                           <-----------GT1                    --------->ATHB12    ----- ---RAP2.3(1)                            --------->MYB52(1)                <---------YAB1      ------ ---ATERF1(1)                           --------->ZAT14               --------->ARR14(2)     <------- -->LBD16---------->DOF2                <---------ZAT14               <---------ARR14(2)<---------ANAC46 --RAP2.3(2)                          <---------At4g35610          <---------ANAC46     <-------GAMYB -LBD16------>ZmHOX2a(1)              --------->At4g35610        <---------ANAC46<---------ANAC58 <--   gccgttctccttaaagtcgctattgtcttcgttgaaggtcagtttacggccttttttaaatccattttggtgtattcgtgattgtttgtgggttgaatga  826800                                                                                      --------->ANAC58      --------->AHL20(2)                                                              --------->ANAC58     --------->ICU4                                                                  --------->ZAT18 <---------TOE1(2)                 <---------ANAC55(2)                               <---------ZAT18 ------->TOE1(2)           <-----------GT1                                         <---------SPL7 -------ANAC58          <---------AHL20(2)                                       <---------------AtSPL8 --->ZmHOX2a(2)        <---------AHL20(1)                                        --------------->AtSPL8 ---->ARR11(3)         <---------AHL20(2)                                        <---------------AtSPL3 --->YAB1              --------->AHL20(2)  <---------ARR14(2)                 --------->DAG2       <- --WOX13(1)        <---------AHL20(2)      --------->ARR14(2) ---------->DOF2---------->DOF2   ------ -------ANAC58     --------->AHL20(2) --------->MYB52(1)  <---------YAB1  --------->YAB1 <----------DOF2   tcgtgcgattatttggggtttttaattaatttcgattcagtaacggttctgaattgcattgcgattaagcacttaatcagaaagtagtacgctttagatt  826900       --------------->AtSPL8   --------->GLK1(2)                                    --------->HSFB2a(2)                     -----  <---------ARR14(2)                            <---------ANAC58                                -----  <---------GLK1(2)                <----------DOF2      <---------HSFB2a(2)           --------->ANAC55(2)  --------->ARR14(2)               <---------DAG2      <---------LBD16                <---------ANAC55(2) <------ZmHOX2a(1)              <-----------GT1 <---------ANAC46             <-------GAMYB    ------- --------TOE2(3)           --------->DAG2       <---------ANAC58        --------->MYB46(2)  <-------- --->CCA1(2)              ---------->DOF2      ---------->ID1         <---------MYB52(1)    ---------   tgaggaatctctgtacatttactaggcaaaaagtttactttttttttttggcgtatttctgggattgcattagttaggcgattgaatcacgtttctgaaa  827000        <------ZmHOX2a(1)      <---------AtLEC2 --------->REM1(1)             <---------ANAC58 ---->ANAC58                   <---------ANAC58                               <----------DOF2 ---->ANAC58              <----------DOF2                          <---------ARR11(3) --->DOF2 --------->At4g35610  <---------ANAC46       --------->ARR11(3)      --------->TOE2(3) -HSFB2a(2)         --------->At4g35610           <---------At4g35610 <----------DOF2 >HSFB2a(2)      <---------ATHB12       ----------->GT1            --------->ARR11(3)   gctacaactaggagatgaaatcatctctcttttgcatgtatacagataatttagatgattttggtctaacatctttgatactttaatggtttttgcatat  827100  Previous    Next  AGI:  At1g03360.1    Description:  ATRRP4; exonuclease. similar to unnamed protein product [Vitis vinifera] (GB:CAO22464.1); contains InterPro domain S1, RNA binding; (InterPro:IPR003029); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 824537    to: 826358    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g03370.1    Description:  C2 domain-containing protein / GRAM domain-containing protein. similar to C2 domain-containing protein / GRAM domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G50170.1); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G03000.2); similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G03000.1); similar to hypothetical protein OsI_021844 [Oryza sativa (indica cultivar-group)] (GB:EAZ00612.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45075.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64252.1); contains InterPro domain GRAM (InterPro:IPR004182); cont Range:  from: 826569    to: 835361    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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