Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <------MYB83                                       <------MYB46(1)                                      <---------AtMYB61                                      --------->MYB111(1)                                      --------->MYB59         <-----------RAV1(1)                                     <---------MYB55(1)      ------>ZmHOX2a(2)                                     <--------P             <------ZmHOX2a(2)                                    <---------MYB52(1)     <---------AGP1                                    <-------GAMYB          --------->ARR11(3)                                   <---------MYB46(3)      --------->ARR14(2)                                   <---------DEAR3(2)      <---------ARR14(2)                             ------>ZmHOX2a(2)            <---------CCA1(2)                            <------ZmHOX2a(2)        <---------GLK1(2)                           <---------ARR14(3)        <---------ARR14(2)                      --------                           --------->ARR14(3)     --------->ANAC58                           --------                           <---------ARR14(2)     --------->ANAC58                           <-------                           --------->ARR11(3)     <---------ANAC55(2)                    --------->DEAR3(1)                           --------->ARR14(2)     --------->ANAC55(2)                  --------->MYB52(1)                        --------->HSFB2a(2)      <---------LBD16                      --------->AtMYB61                        <---------HSFB2a(2)    <---------ATHB12    <------NtERF2<---------At4g35610 -       ----------->RAV1(2) <---------ARR11(3)--------->WOX13(1)   <---------MYB46(3) --------->MYB46(3) -------DOF2     <---------GLK1(2)<---------DEAR3(1) --------->ARR14(2)         --------->At4g35610 <   tttcttcaaacctgtgccaaattcttcgagatctcgtcggtaggtttcaatcacggattcggatctggtggctagagttttcatcagaccaccgaagctc  824100         <------NtERF2                                                                            <--    --------->DEAR3(1)                                                                            ---  <---------At5g28300                                                                            <--- <---------ALFIN1            <---------HSFB2a(2)                                        <---------GLK1(2) ->ZAT2<---------DEAR3(1)   <---------LBD16                                             <---------ARR14(2) ->At4g35610           <---------WOX13(1)                                         --------->ARR14(2) --At4g35610<---------MYB52(1)                     <-------TEIL                   <---------GLK1(2) -------->MYB46(3)  <---------YAB1          <---------HSFB2a(2)                   <---------ARR14(2) ---------MYB55(2)<-------TEIL             <---------LBD16             <---------ANAC46 --------->ARR14(2)   catccaccgtcgtcgttagattcagattgctctggatgttcttgctctggatgttcatgctcttcgctgtgtttcggtgaatcggattcggattcggttt  824200                <---------ANAC46                <---------ANAC58                <---------ANAC58                <---------ANAC55(2)                        ------>ZmHOX2a(2)          <---------ARR11(3)                              <------ZmHOX2a(2)          --------->ARR11(3)                             <-----------ARR10      ------>ZmHOX2a(2)                                  --------->ARR11(3)     <------ZmHOX2a(2)                                   --------->AGP1    <---------ARR14(2)                                   <---------ARR14(2)    --------->ARR14(2)                                   <---------AGP1                            --    <-----------ARR10                                    <---------ARR11(3)                      ----    --------->ARR11(3)                                   --------->ARR14(2)                     -----    --------->GLK1(2)                                   <---------CCA1(2)                      <-----    <---------ARR11(3)                           --------->DAG2    <---------ATHB12            <-----    <---------AGP1         --------->ARR14(2)   ---------->DOF2   ------>MYB46(1)              <-----   <------ZmHOX2a(1)       <---------ARR14(2)<---------ANAC46     ------>MYB83                 <----- -------HSFB2a(2)  --------->REM1(2)         <---------ANAC58     --------->MYB52(1)           <----- ------>HSFB2a(2)--------->LBD16             <---------ANAC58<-----------GT1                  ------>ZmHOX2a(2) ------LBD16    <---------ANAC55(1)    <-------TEIL    ----------->ARR10--------->ZAT14       =======   ctggaggatctaggtcttccgtgaagacggatttgaagaaattcatagcgtaaagctcagatcttaccaatcggtactctcagataatttgtttgatccg  824300                                                                                     <---------O2                                                                                     --------->O2                                                                                     <---------TGA1a                                                                              <---------ZAT2                                                                              --------->ZAT14--------    --------->GLK1(2)               <-----------HVH21                         --------->At4g35610 -------->DOF2                      <-----------TGA1                          <---------At4g35610 <-- ------->HVH21                     <---------ANAC58                           <---------ZAT14<------- ---->LBD16                        <---------ANAC58      ======================================bZIP_DOF ----ANAC55(1)          <---------ARR14(2)               ---------->DOF2      --------->ZAT2 <------- ----ANAC55(2)          --------->ARR14(2)          <------ZmHOX2a(2)      --------->At4g35610    --- ----ANAC58            ====================================HOX2a_HOX2a     <---------At4g35610<------ ----ANAC46            <------ZmHOX2a(1)           <---------ARR11(3)   <-----------HVH21    *TSS<--- ----ANAC58          <---------TOE1(3)             --------->ARR11(3)<---------ANAC58<---------ANAC46 =============================HOX2a_HOX2a      <------ZmHOX2a(1)     <---------ANAC58--------->TGA1a   tgaaagaatcaatttgaagagtgaaggattcgaattagcgtcagaaataggaagatcacaaaagacttgaagcttgtcgctgcagagacgtctaattttt  824400                                               --------->YAB1                                            --------->YAB1                                            <---------ICU4                                         --------->WOX13(1)         <---------AHL20(2)            <------NtERF2        <---------AHL20(2)             ------------>CBF     <---------AHL20(2)              <---------ANAC46     --------->AHL20(2)              <---------ANAC58 ->AHL20(2)                 <---------------AGL15 ---------GT1               --------------->AGL15 --AHL20(2)                 <---------DAG2 --------->ICU4 --AHL20(1)<---------TOE2(3)<----------DOF2<---------ATHB12                                <---------GLK1(1) ------->ID1           --------->YAB1<---------ANAC58                  ----------->TBP    --------->ARR14(2) ---AHL20(2)   ----------->GT1      ---------->ID1                     <---------YAB1     <---------ARR14(2) --------GT1 --------->YAB1<-----------------AGL3           <-----------RAV1(2) <-----------RAV1(2)   ttcccatttttttaatgaagataaataatactttatttggcgtcaattatcagattaatgggccagaagttttataaatgggccagaagttggatatgtt  824500                                                 <---------TOE1(3)                                                 <---------TOE2(3)                                             --------->TOE2(3)                                             <-----------TGA1             --------->ANAC46           <---------MYB52(2)           --------->ZAT6               --------->MYB46(3)    --------->MYB46(3)               --------->ZAT18    <-----------GT1  ----------->RAV1(1)                *TSS --------->MYB52(1)       ---------->ARF1          <--------   agtccaacaaataacacaaaaccctagaattcattcaagggaactaacgtcaaggtttttgctcttcttctctcccaagtcccaaactcgttttgcatcg  824600                                                                             --------->WRKY38(1)                                                                             --------->WRKY12                                                                            <---------MYB52(1)    <--                                                                        <---------At5g28300       <--                <---------At4g35610                                     <---------DOF5.7(2)      <---                --------->At4g35610                           --------->ANAC58                   ----           <---------ANAC58                                   --------->ANAC58        --------->ANAC58           <---------ANAC46                                 ---------->DOF2<-------GAMYB       <-----      <-----------RAV1(1)                         <---------AtMYB61 <---------ZAT6<-----------RAV1(2) -AtLEC2   <---------ANAC58  ---------->DOF2   ----------->HVH21 ------------>AtMYB77 --------->ANAC58   ccattgttgtgttgctggagctaaatagagagaaagagagagagtgtctgtgatggtgatgagaaagctacagttaccgttgagccagacgcagaaggtt  824700                                          <------NtERF2                                          <---------At4g35610                                          --------->At4g35610                                         <---------DEAR3(2)                                         ------>NtERF2                                        <---------DEAR3(1)                                       --------->ATERF1(1)                                       <------NtERF2                     ------>MYB46(1)    ---------                                      <---------SPL7                     ------>MYB83 <---------WRKY12                                      <---------ATERF1(1)              --------->DREB2C(2)  ---------                                      <-----------HVH21                --------->DEAR3(1) --------->YAB1                                     <---------DEAR3(1)                --------->MYB46(3) <---------ICU4 ----MYB83                        <---------ETT(2)                <-----------HVH21  --------->WRKY18(1) ----MYB46(1)              <---------ATHB12                      --------->YAB1     --------->LBD16 ------AtMYB61           --------->WOX13(1)    --------->ZAT6<---------MYB52(1)     <-----------HVH21 ----->MYB59     <---------At4g35610<------NtERF2 ----------->TGA1<-----------TGA1 --------->ANAC46-- ----MYB52(1)<---------ATHB12  <-----------RAV1(1)----------->HVH21   --------->DEAR3(2) <---------ATHB12   aggtttgagagagcaatcgagcggcttcaatcactgtcgtcgtcggctaactctgacgcttctgttatcgtcaccgactctattcccgtcaaccatgacg  824800                                                                       <------MYB46(1)           --------->AHL20(2)                                          <------MYB83         --------->ANAC58                                          --------->ATHB12          --------      ------>ZmHOX2a(1)                                           <---------YAB1             --------     --------->TOE2(3)                                          <-----------GT1    ---------->DOF2<-- -->HVH21--------->ANAC58         <---------HSFB2a(2)     <---------ANAC58        XXXXXXXXXXXXXXXXXXX -->TGA1 --------->ANAC55(2)      --------->HSFB2a(2)     <---------ANAC58      --------------->AGL15 ---->NtERF2       <---------At4g35610<---------WOX13(1)  <---------ANAC46      --------->TOE2(3) ---   atgccttcctcaagtaatttcatctcattctcccttctggattgaaatttttgtcaaattgcgttttcacgattggttttttcattaaaggggacatgga  824900                                                                                      <-----------RAV1(2)                                                                                   --------->ANAC58                                                                                 <---------ANAC58                                                <---------ANAC58           ------->TEIL                         ----------->HVH21      <---------ANAC46          <---------ALFIN1   --------->LBD16     --------->ANAC46         <---------ANAC58        --------->ANAC58  <---------TOE1(1)  <---------ANAC58         <---------ANAC46          --------->ANAC46       ------ ->ANAC58            <---------ANAC58      --------->ALFIN1             --------->ANAC58--------->O2< ->ANAC58       --------->MYB52(2)      --------->ALFIN1               ------->TEIL--------->ANAC58 - -------HSFB2a(1)<---------At4g35610  <---------ANAC46      <---------ANAC58     <---------ANAC58<--- XXXX>MIR163<---------MYB46(3)      --------->ZAT14         <---------ANAC58--------->ZAT2    <------ ------>HSFB2a(1)<-------GAMYB  <---------DEAR3(1)--------->ALFIN1 <---------------AtSPL3--------->ARR14(2)   acttccgaggtcgatggtgagttgctcgcgacggtctgtggagtagtggagcgtgtggataagcttgtctatgtacgcaccttgcgagccaggtctgtga  825000  Previous    Next  AGI:  At1g03350.1    Description:  BSD domain-containing protein. similar to BSD domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G13110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22467.1); contains InterPro domain BSD (InterPro:IPR005607) Range:  from: 822638    to: 824393    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g03360.1    Description:  ATRRP4; exonuclease. similar to unnamed protein product [Vitis vinifera] (GB:CAO22464.1); contains InterPro domain S1, RNA binding; (InterPro:IPR003029); contains InterPro domain Nucleic acid-binding, OB-fold-like (InterPro:IPR016027) Range:  from: 824537    to: 826358    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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