Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->WRKY12                                                                                        --------->WRKY38(1)                                   <-----------RAV1(1)                                <----------DOF2                                   --------->ALFIN1                             --------->At4g35610                     --------->ARR14(2)                                         <---------ZAT2      <---------WRKY38(1)       --------->DAG2           <---------AHL20(2)     <---------At4g35610     --------->WRKY18(1)       ---------->DOF2 ---------->DOF2                  --------->ZAT2   --------->WOX13(1)<---------ARR14(2)   --------->At4g35610                --------->At4g35610 <------ZmHOX2a(2)   --------->GLK1(2)    <---------At4g35610                <---------At4g35610    <   gcgatcagtcaacaaaattagagaatccaattgaaaagtgttgcagcttcaaagactatatttttgtttcaattgagttagcagcagcctttgactctca  726500                                                                             --------->ZAT6                                                                    <------MYB83                                                                   --------->MYB111(2)                                                                   <---------DEAR3(1)                                                                   <---------AtMYB61                                                                   --------->MYB55(2)                                                                   --------->MYB46(2)                                                   --------->TOE2(3)<------MYB46(1)         >>>>>>>>>RAP2.2                                                   >>>>>>>>>RAP2.2 <---------MYB46(3)       ---------                                                --------->WOX13(1) --------->MYB111(1)   --------->WOX13(1)           --------->YAB1                    --------->ANAC58     <---------MYB55(1)  --------->ANAC58      --------->YAB1                        --------->DAG2        <--------P<------ZmHOX2a(2)      --------->TOE2(3)                    ---------->DOF2       <-------GAMYB        --------->ANAC58   --------->WOX13(1)                     <---------ATHB12      --------->ATHB12 --------->YAB1 <---------YAB1                   <-----------RAV1(1) ---------->DOF2   <------NtERF2--------->DAG2 -----------GT1           ----------->RAV1(1)--------->ANAC58   <---------MYB46(3)  ---------->DOF2   tttatcaatcttatcacaaaaaacgtagcaccacaaatgttgcaataaagcaatctaaaagaaacttggttggtgtcgatcactaataaagcaatctaaa  726600                                                      ----------->RAV1(1)                                                   --------->ANAC55(2)                                                   --------->ANAC58                          ---------->DOF2          --------->ANAC58                       --------->ANAC58            <---------ANAC55(2)                       --------->ANAC58            --------->ANAC46                      --------->DAG2      --------->At4g35610                     --------->At4g35610   --------->PCF5    ---------->DOF2     --------->ANAC46                   ---------->DOF2     >>>>> >TOE2(3)      --------->YAB1  <---------------AGL15--------->LBD16  <---------REM1(1)   ---------->DOF2   ctctggtccccaaacaaacataaaaaagcaaagctataactagcagcaacgatgcgcaacatcggaacaagatgaagcaaaagcagaagagaaaagaaga  726700                                                         ---------->DOF2                                                     --------->ANAC58                         <------NtERF2                                                     --------->ANAC58                         -------      --------->TOE1(3)                            <--------P                  >>>>>>>>>TBF1 <-------      --------->TOE2(3)                          ----------->GT1            >>>>>>>>>TBF1   <--------   <-----------GT1                            --------->ALFIN1          <------ZmHOX2a(1)   --------- >>>>TBF1    <------ZmHOX2a(1)               <------ZmHOX2a(1)  <------ZmHOX2a(1) >>>>>>>>>TBF1     <   agaaattaccttgaaggagagaagttgaagtgatgaagagaagaagaggaggggtaagtaaaagaaggagaagaggaagaagaagaagaagagggcggag  726800       --------->MYB52(1)      <---------WRKY12      <---------WRKY45      <---------WRKY38(1)     --------->WRKY18(1)    <-----------HVH21   <------MYB83            <-----------RAV1(2)   <------MYB46(1)       <-----------HVH21  --------->MYB46(2) --------->ETT(1)  --------->MYB59    <---------DEAR3(1)        ------>MYB46(1) -->ATERF1(1)       --------->ATERF1(1)        ------>MYB83 --ATERF1(1)   --------->DAG2   <------ZmHOX2a(1)                        <-----------RAV1(1)    <---- -DEAR3(1)   ---------->DOF2 <---------At4g35610--------->HSFB2a(1) --------->ANAC58            <---- >ALFIN1  ------->GAMYB<------NtERF2           -------->P           --------->ANAC58      <---------MYB52(1) ---------MYB52(1) <-----------HVH21  <---------At4g35610        ------>ZmHOX2a(1)       ------------   cagttaggtcaacgggaaaggggtcggagtcagaggattgagctaatccaaccttctccttgatgtccttaagcaatgttgcccatttcatcgttgtgct  726900                                                                                           ------>ZmHOX2a(2)                                                                                          --------->CCA1(2)                                                                                          <------ZmHOX2a(2)                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(2)                                                                                         --------->AGP1                                                                                        --------->At4g35610                                                                                        <---------At4g35610                                                                                       ----------->ARR10                                                                                   --------->O2                                                                                   --------->TGA1a                                                                                   ==================                                                                                   <---------ZAT2                                                                                   --------->bZIP60(2)                                                                                   --------->ZAT2         <---------GLK1(2)                                                         --------->ANAC46       --------->LBD16                                                            ------>MYB46(1)       --------->ANAC46                                                           ------>MYB83      <---------HSFB2a(2)                                 ----------->HVH21      <---------ALFIN1      --------->HSFB2a(2)               --------->At4g35610                     --------->MYB46(3)   <------ZmHOX2a(2)                --------->AtMYB61   ----------->RAV1(2)     <---------MYB55(2) ------DOF2                      ------>NtERF2        <---------ARR14(2)    --------->ANAC58 -----DAG2                      --------->DEAR3(1)    --------->ARR14(2)    --------->ANAC58 --------->WRI1      --------->At4g35610<---------At4g35610                 --------->ANAC46       <-   tttcgatcccagaaactttcatccgatgaagacgacgacctcaccagaccagaccagaccctgactcggtctccaaacacgacccacctcagatccgagt  727000                      ------->GAMYB                                                       <----------                      --------->TOE2(3)                                               ------>ZmHOX2a(1)                      --------->TOE1(3)                                              --------->TOE1(3)             <---------AHL20(2)                                                ------------>CBF      --------->At4g35610                                                     --------->ANAC58    ---   <------ZmHOX2a(2)-------->P          ------->GAMYB                         --------->ANAC46  <---- ============================MYC_MYB  -------->P                              --------->ANAC58<------ -----NtERF2 --------->AHL20(2)    <------ZmHOX2a(2)              ----------->GT1    --------->TOE2(3)   cgtcgatcagataaataaaatcaaccctaaaaatgcgatcaacccaaaactctcattcgttcacaagaaggaaacaaaacacacaatccttaaattgagg  727100                                     <----------ID1                                     ----------->GT1                                    ----------->GT1                                   --------->DAG2                                  ---------->DOF2        <---------TOE2(3)     <---------------AGL15       ---------->DOF2       <-----------------AG      --------->AHL20(2)     ----------------->AGL1                             ------------>CBF  --------------->AGL15      ----------------->AGL2                       <---------ZAT2  ============================================MADS_MADS                   <---------At4g35610  <---------------AGL15      <-----------------AGL1                       --------->At4g35610 --CBF<---------AHL20(2)    ------------------------>ANAC81      <------ZmHOX2a(2) ------>GLK1(1)          <------ZmHOX2a(1)--------->AHL20(2)    <---------ARR11(3)              <---- --ZmHOX2a(1)  ---------->DOF2--------------->AGL15             --------->ARR11(3)              <---- ---TOE2(3)---------->DOF2 --------->GLK1(1)       <----------DOF2   <------------CBF ----------->HVH21   aattcaaattaaagaaagaaagaagaaggagacccaaaaaggaaaaaaatagtcttttttttttaagatcaaattgagctgatacaatgtgacgaattag  727200                          <------ZmHOX2a(2)                          --------->CCA1(2)                         <---------ARR14(2)                         --------->ARR14(2)                         <---------ARR11(3)                         --------->AGP1                         --------->ARR11(3)                    ------>ZmHOX2a(2)                   --------->CCA1(2)                   <------ZmHOX2a(2)  <---------ANAC58--------->ARR11(3)  <---------ANAC58<---------ARR11(3)                                         <-----------GT1  <---------ANAC46--------->AGP1                                         <----------DOF2 <-----------------------TaNAC69(2)                                      <---------DAG2 -----TOE2(3)     <---------AGP1               ------->TEIL             <---------DAG2     <---------KAN4(2) -----TOE1(3) ---------->DOF2      <-----------GT1                 --------->ARR14(2) --------->ANAC46   ggtttcgtagcaagaagaaagatctaagatccaaaattttcaatttgtgaacccctaaacacttgaaaaaatccccttttttccttccacgagaatgagc  727300                                               --------->ANAC46                                        --------->LBD16                                      <---------LBD16                                               -                                      <---------At4g35610                                           <                                      --------->At4g35610                  ------>ZmHOX2a(1)       <-                                     --------->MYB52(1)                   --------->TOE1(3)  <-------                            ---------->DOF2---------->DOF2                --------->TOE2(3) ---------                  --------->DAG2<---------ARR11(3)                     <-----------GT1 <---------AHL20(2)                 ---------->DOF2--------->ARR11(3)             ---------->ID1---------->DOF2<--------              <---------------AGL15 ---------->CDC5     <------------------------ANAC81--------->AHL20(2)   aaaaacccaaattttgacaaaaagggaagaaaaagagcttagcggaaaaacgcgattttgtttttgttttttttttccttaaagaaaatttaaattaaat  727400  Previous    Next  AGI:  At1g03060.1    Description:  WD-40 repeat family protein / beige-related. similar to WD-40 repeat family protein / beige-related [Arabidopsis thaliana] (TAIR:AT4G02660.1); similar to hypothetical protein OsJ_012035 [Oryza sativa (japonica cultivar-group)] (GB:EAZ28552.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62237.1); similar to putative beige protein [Oryza sativa (japonica cultivar-group)] (GB:AAP12994.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro: Range:  from: 712473    to: 726891    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version