Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   ==================HOX2a_HOX2a                                                                                 <----------DOF2                                                                                 ------>ZmHOX2a(1)                                                                            --------->bZIP60(2)                                                       <-------TEIL    --------->ANAC58                                              --------->WRKY12         --------->ANAC58                                             --------->DOF5.7(2)     ---------->DOF2          <------ZmHOX2a(1)                 --------->TOE2(3)      <---------TOE2(3)        ------>ZmHOX2a(2)   aggtttcatagaggaacatcgattatcaagaacatcgtcttggaaacgtttaccagtttcatcaggtttaagaaagccatgtcctttcccttgatcgaga  706200                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              -------                                                                                             ------>MYB83                                                                   --------->YAB1            ------>MYB46(1)                     --------->ICU4                                <---------ICU4   <---------ANAC58             --------->HSFC1(2)                ------>ZmHOX2a(1)  --------->ICU4    <---------ANAC58             <---------HSFC1(2)            <---------ALFIN1       <---------YAB1    ----------->RAV1(2)         ------->GAMYB                  <---------ALFIN1 --------->ANAC58        <---------MYB52(1)        --------->ANAC58               <-------TEIL      --------->ANAC58      --------->MYB52(2)        --------->ANAC58   <-----------GT1 --------->AtMYB61   <---------YAB1<---------MYB52(1)      --------->MYB52(1)<---------YAB1--------->TCP16(2)------>NtERF2<---------YAB1 <---------ANAC46   cttaatcccaacggaaacatctgattatgaaaccctacaggtccacctcctccaatggcacccatatgattatgattcccttcgttgcctgaaccaagct  706300                          <------NtERF2                         ------>NtERF2                         <---------ATERF1(1)                         --------->LBD16                        --------->RAP2.3(3)                        --------->DEAR3(1)                        --------->RAP2.3(2)                        <---------DEAR3(1)                       --------->ORA47(2)                       --------->ERF1                       --------->RAP2.3(1)                       --------->RAP2.6(1)                       --------->RRTF1(1)                       --------->ATERF1(1)                       --------->DEAR4(2)                      ------>NtERF2                                                   <---------HSFB2a(2)                      <---------ATERF1(1)                                             --------->HSFB2a(2)                     --------->TGA1a                                              ===================                     <---------TGA1a                                              ------>ZmHOX2a(2)                     --------->bZIP60(2)                                         --------->GLK1(1)                     --------->ANAC58                                            <---------GLK1(1)                     <---------O2                                                ====================                     --------->O2                                                <------ZmHOX2a(2)                     --------->ANAC46                                           <---------ARR11(3)                     --------->ANAC58                                           <-----------ARR10                   <---------ALFIN1                                             <---------AGP1                  --------->MYB46(3)                                            --------->ARR14(3)                 --------->DEAR3(2)                                             <---------ARR14(3)                <---------TCP20                                                 --------->ARR14(2)                --------->TCP16(1)                        --------->LBD16       <---------ARR14(2)                <---------TCP15(1)                      <---------LBD16         --------->GLK1(2)                --------->PCF5                --------->GLK1(2)                 --------->ARR11(3)      --------->At4g35610--------->ABI4(1)   <---------GLK1(2)         --------->ANAC58    --------->ATHB12 <---------ALFIN1        <---------ARR14(2)        --------->ANAC58 --------->YAB1 --------->PCF2    --------->LBD16      --------->MYB52(1)      <------ZmHOX2a(1) ---ZAT2  <---------DEAR3(1)     <---------HSFB2a(2)  <---------ARR14(2)      ----------->ARR10     < ---At4g35610  <---------TCP16(2)--------->HSFB2a(2)  --------->ARR14(2)    --------->LBD16         < -->ZAT2  <---------AtMYB61--------->DEAR3(1)--------->ARR14(2)       <---------GLK1(1)            <- -->At4g35610--------->ALFIN1<---------ARR14(2)----------->RAV1(2)   ---------->DOF2--------->At4g35610   gaagcatcatcggaggtggacccacgccgccgattccagagagaccagaacctgaagaaccggagaagttggaaagcccgaggatctgctcgaagaaatc  706400            <---------ARR14(2)     ================HOX2a_HOX2a     <------ZmHOX2a(1)    <------MYB83    <------MYB46(1)  <--------P--------->ARR14(2) <---------MYB52(1) <-------GAMYB------>ZmHOX2a(2)                                                                <----- ===========HOX2a_HOX2a                                              <---------TOE2(3)         <----- ===========HOX2a_HOX2a   --------->YAB1                             <---------TOE1(3)         ------ ---------MYB46(3)<---------At4g35610                              ---------->DOF2         --------->ALFIN1 ---------DEAR3(2)--------->GLK1(1)                     <---------TOE2(3)        <-----------GT1   <- --------DEAR3(1) <---------GLK1(1)        <---------YAB1    <-----------------------TaNAC69(2)------   gtcggtaggagatggatcggagatgctatcatgtgggatgttgttgttattagccatgaaggaaacgagtaaaggtttgaaattttcgactcagtggagc  706500                                                                               <------MYB46(1)                                                                               <------MYB83                                                                               <---------ANAC46                                                                               <---------ANAC55(2)                                                                              --------->MYB111(2)                                                                              --------->MYB111(1)                                                                              --------->MYB46(2)                                                                              --------->MYB52(2)        ---------->DOF2                                           <---------ANAC58   ----------->GT1                                                <---------ANAC58        --------->YAB1 ----ZAT2                                                   --------->ARR11(3)--------->MYB59 ----At4g35610                                              --------->GLK1(2)<---------MYB55(1) --->At4g35610         <---------HSFB2a(2)                 <---------GLK1(2)<---------MYB52(1) <----- --------ANAC46 <---------ANAC58                    --------->AtLEC2      <---------MYB46(3)<-------- --->ZAT2       <---------ANAC58              <----------DOF2     <---------ANAC46       --------->ICU4   tgggtgagttaaaagatagcgagttagagaagagaagtcgaagaacaactttccatgcgaagaatcttgtgtggagttgttaggtgagagaatgatgatg  706600                                                                                         <------ZmHOX2a(1)           <------ZmHOX2a(1)                 ---------->DOF2                    ----------->GT1        <---------ICU4               --------->CCA1(2)                      <---------YAB1        --------->YAB1              <---------ARR14(2)                   --------->AHL20(2)  <---------At4g35610               --------->ARR14(2)            <----------DOF2    ---------->DOF2 ----YAB1 <----------ID1       *TSS<------ZmHOX2a(1)   <----------DOF2   <---------AHL20(1)      <--- -YAB1 --------->ICU4          ---------->DOF2         <---------DAG2    <---------AHL20(2) <--------   cttaagctaatgaggacgaagagacacagacgagaaaggatatgacaaaaagactcactttatgctctctttcattttatttttgttaaaaggaccttac  706700                                            <---------GLK1(2)                                          --------->LBD16                                         <---------HSFB2a(2)                                         --------->HSFC1(1)                               <----------                                         --------->HSFB2a(2)                    <----------DOF2               <---------ARR14(2)      ------>MYB83    --------->ZAT18          <---------DAG2 <---------TOE2(3)                     ------>MYB46(1) <---------ZAT18      <---------ZAT18 -------DOF2   --------->ARR14(2) <-----------GT1     --------->ALFIN1      --------->ZAT18 -MYB59   <-----------GT1 ---------->ID1 <---------HSFC1(1)<----------DOF2 --------->ALFIN1  <-------   tttgtggtttattttcggttttgcccttgttcttatataccttccagaaacttgaagtgggctttatttgttttgaagtgggctttttgttttgactttc  706800                                            <----------DOF2                                          --------------->AGL15                                          <---------------AGL15                                     <---------MYB46(2)    <---------AHL20(2)            <-----------GT1   <---------AHL20(2)          <----------DOF2                                                -------   --------->AHL20(2)       --------->ARR11(3)                                             <---------AHL20(1)   <---------AHL20(1)       <---------ARR11(3)                                        --------->AHL20(2)   --------->AHL20(1)    --------->DAG2------>MYB46(1)                         <----------DOF2<------ -GT1               <---------TOE2(3)<---------MYB59     ----------->GT1   <----------DOF2 --------->AHL20(1) ---DOF2--------->YAB1  ---------->DOF2------>MYB83     ----------->GT1 <-----------GT1   --------->AHL20(2)   ttcaatttattcatatcaaattaagaaaaaggtcttttaccaaactctttttagtagaatgttaaaaaccaatataactttctttttttaaaatatataa  706900                                                                            --------->GLK1(2)                                                                            <---------ARR11(3)                               <---------DEAR3(1)                           --------->ARR11(3)                              <---------AtMYB61                            --------->RVE1(1)                              --------->ATERF1(1)                        --------->AHL20(2)                           <------NtERF2                       <---------CCA1(1)                         <---------ANAC46                      <---------RVE1(1)                 --------->ANAC58  <-----------HVH21          <---------ARR11(3)    ----------->GT1      <---------LBD16        <---------ZAT6<---------GLK1(2) --------->CCA1(2)       --------->ETT(1)   <---------MYB52(1)--------->ARR11(3)          <---------MYB52(1) -->AHL20(2)     --------->ANAC58  <-----------TGA1         <---------TOE2(3)          ---------->ID1 ---AHL20(2)     --------->ANAC46<------NtERF2--------->MYB52(2) <---------AHL20(2)<----------DOF2---   atgatatgggaaaaattctacgcattgtcggggtcgtcgtcatctcgttagtggtagaaaataagatttttttaaaaaaatctgtctttgtcgttttttc  707000                                                   <-------MYC3                                                   ------->MYC3                                                  --------->O2                                                  <---------ANAC55(2)                                                  --------->ANAC55(2)                                                  --------->ANAC58                                                  --------->TGA1a                                                  <---------O2                   =========================================bZIP_DOF                <---------ANAC46                  --------->ANAC58                <---------ANAC58          <---------ATHB12                 <---------ICU4                <-----------GT1 ------>ZmHOX2a(1)    <-----------GT1---------->DOF2       <---------AHL20(2)         ----------->GT1     --------->TOE2(3) ------>LBD16   ----------->GT1       --------->AHL20(2)    <-----------GT1       <---------ANAC58 --   cgaaatttagcactcatggagtaaagtttctaatatccaatataaaaatgacacgtttcattttgccatatggtattacaacttgcttctccttagtgct  707100  Previous    Next  AGI:  At1g03040.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to UNE12 (unfertilized embryo sac 12), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G02590.1); similar to UNE12 (unfertilized embryo sac 12), DNA binding [Arabidopsis thaliana] (TAIR:AT4G02590.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO22631.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 703906    to: 706631    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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