Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         <---------MYB52(2)                                    ----------->HVH21                                  <---------ANAC55(2)                                  --------->ANAC55(2)                                  <---------ANAC58                                  <---------ANAC58                                  ==========================================bZIP_DOF                                  --------->TGA1a                               <---------MYB52(1)                             --------->HSFB2a(2)                             <---------HSFB2a(2)          ------>ZmHOX2a(2)                        <---------HSFB2a(1)              <------ZmHOX2a(2)                        <---------HSFC1(2)              --------->ARR11(3)                        --------->HSFB2a(1)  <---------STY1(1)   <----------DOF2                   <-                  <---------LBD16<-------TEIL--------->STY1(1)   <---------DAG2          <---------ANAC58   <---------GLK1(2)    --------->HSFC1(2)  --------->TOE2(2) <---------ALFIN1           <---------ANAC58   --------->ARR14(2) <---------ARR14(2)    --------->TOE1(2)<---------ZAT18            -------------   <---------ARR14(2) --------->ARR14(2)  ------->TEIL  <---------ARR11(3)              -------------   aatcggattcgagtaatactctcggaaccttctggtacgtgacgaacctagggtttaagatcgcacacttttctcttcacatgtctcgatttcgtactct  677500                                                             --------->ANAC55(2)                                                             <---------ANAC58                                                             <---------ANAC58                                                             --------->bZIP60(1)                                                             <---------ANAC55(2)                   <-                                                             <---------bZIP60(1)                   <-                                                         <-------GAMYB                         <-----                                             <---------ARR11(3)                              <-------                                             --------->ARR11(3)                              <-------      <----------DOF2                        --------->ARR14(2)                              <------- ---------DOF2                               <---------ARR14(2)      --------->ARR14(2) <---------ZAT6 -->AtSPL8     --------->GLK1(1)             <-----------ARR10       <---------ARR14(2)<---------TOE2(3) -->AtSPL3<---------At4g35610  <-----------GT1   --------->At4g35610<---------MYB52(1) <---------TOE1(3)   tctttagtctttcgctgatttcttctgtttttgtcactgtttcgcaatatctgctcgagggttacgtcccgtttctgtatgaacgatttagggttacgtt  677600                                                                                                    -                                              <---------MYB46(3)                                    <                                             <---------WOX13(1)                                     < --------ANAC58                             >>>>>>>>>ARR2                                           < --------ANAC58                             <------------CBF                                        < ----MYB52(1)                             <---------YAB1                                            - --ANAC58                          --------->ANAC55(2)                                         <----- --ANAC58           <---------GLK1(2) --------->ATHB12                                        <------ --ANAC46    <----------DOF2       <---------ANAC55(2)               <----------DOF2 <-------TEIL  <-   ggcttcttctctgtgctttgttgattctctgcgaaatacttgatttgattgttgtgttcaaattccttcttctttctctcttggtgattcatcgtgatgg  677700      --------->ARR14(2)      <---------ARR11(3)      --------->ARR11(3)                                                                    --------- -------->ANAC55(2)                                                                       --------->ANAC58 ---------ANAC55(2)                                                                ------>ZmHOX2a(2) ---------ANAC46                                                                  <------ZmHOX2a(2) ---------ANAC58                                                                 --------->ARR11(3) ---------ANAC58                                                                 <---------ARR11(3) ---------->GT1                                                                  <---------AGP1     < ----MYB46(3)                                                               --------->YAB1----------- ---WOX13(1)            <----------DOF2                              XXXXXXXXXXXXXXXXXXXX>MIR400----- ------TEIL    <---------YAB1      <---------YAB1           <---------YAB1 <---------YAB1 --------->ANAC58   atgcgtaatatcttcttatcgttgttcttttggtagtctgattagttttagtttgtgttttgatgatatataagagtatcatagatctcaacaagtaaat  677800                                                                                             <-------                                        <------------CBF                            <-----------RAV1(1)                             <---------ANAC58                                       =================                        <---------ICU4 --------->ATHB12                           <---------ANAC46                     --------->YAB1  <---------DAG2             <---------ICU4 --------->GLK1(2)                <---------GLK1(1)    <----------DOF2           --------->ICU4 <---------ARR14(2)   <- >AHL20(2) --------->YAB1    <---------ANAC46                --------->YAB1   <---------GLK1(2)    <- ------------------------ANAC81   <-----------GT1         <---------At4g35610 --------->ARR14(2)  <-- >GT1    --------->ARR11(3)  <---------ANAC58  <---------ARR14(2)            <------ZmHOX2a(1)  <---- ---->GLK1(2) --------->ATHB12 ----------->GT1 --------->ARR14(2)    <---------ANAC46       <------NtERF2   tctgttttagttatcttgatttctcatcatgtcttgttactttattgcagaaccttgttcatctcataatggcgaagaaggattctgtgttggaggcagg  677900                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                         --------->HSFB2a(2)                                      ---    <-----------HVH21   ---------->DOF2  <---------HSFC1(1)                                       --- ----RAV1(2)      <-----------RAV1(1)    <---------HSFB2a(2)               --------->LBD16--------->ZAT2 ====RAV          --------->ALFIN1      <---------LBD16                  <---------LBD16  --------->At4g35610 -----MYB83<---------RAP2.6(2)        --------->GLK1(2)              ----------->HVH21    <---------ZAT2 -----MYB46(1)    <---------REM1(1)  <---------GLK1(2)               --------->WRKY12     <---------At4g35610 -------AtMYB61 <------MYB46(1)      --------->ARR11(3)        ------>NtERF2             ------->TEIL --ZmHOX2a(1)   <------MYB83<----------ID1                   --------->MYB46(3)<---------WRKY12<-----   atggtctgtcatggaggctggtgttgcaaagctacaaaagattctggaagaagtgcctgatgagccaccatttgacccggttcaacgtatgcagctgtac  678000                      --------->MYB52(2)                --------->YAB1                            ----------->GT1               <---------YAB1                          --------->ALFIN1         <---------YAB1    <---------ANAC58       --------->MYB52(1) ------->TEIL--------->YAB1<---------ANAC46     --------->DOF5.7(2) ------>ANAC55(1) --------->ICU4                <---------MYB52(1) ------>ANAC55(2) <---------YAB1               <-------GAMYB<---------ARR14(2) -------ANAC55(2)<---------TOE2(3)            <---------ANAC46               <---------ANAC46 ------>ANAC46<---------AHL20(2)          <---------GLK1(1) --------->ARR14(2)                  <---- ------>ANAC58--------->AHL20(2)         <---------ZAT6<---------ANAC46      ----------->GT1    <---- ------>ANAC58<---------AHL20(1)   <-----------GT1<---------DOF5.7(2)--------->ANAC46     <------ZmHOX2a(1) ----REM1(2)<---------YAB1 <---------ANAC58  <-----------------------TaNAC69(2)      <-----------GT1   acgtatgtcttcttattataatgtttgtttcttgtttttactagagttccgttaacggtgtggatactaacacacagcgatgtgaattcacaggactgtc  678100                                                   ------>ZmHOX2a(2)                                                --------->ATHB12                                            ------>ZmHOX2a(2)                                      <---------At4g35610                           --------->YAB1 --------->ARR11(3)                           -------->HAHB4 --------->AGP1                           <---------ICU4 <---------AGP1<---------AtMYB61                           --------->ATHB12<------ZmHOX2a(2)                          --------->ICU4  <---------ARR14(2)         ------->TEIL     <---------YAB1  --------->ARR14(2)       <---------ZAT18 ============================HOX2a_HOX2a       <---------ZAT14 ===========================HOX2a_HOX2a       --------->ZAT14 ===================================HOX2a_HOX2a  <---------YAB1       --------->REM1(2)  <---------ATHB12<---------ARR11(3)     <---------ARR14(2) --------->GLK1(2)     ------>ZmHOX2a(1) <---------CCA1(2)       --------->ARR14(2) -----ETT(2)          ------------------>ATHB9 <---------YAB1 <---------ANAC46        --------->MYB52(1) -----ZAT18  --------->LBD16          --------->At4g35610<---------ANAC46    <---------YAB1         <   cacaatctgtgtacccagaaacctcctaatgattactcacagcagatctatgatcggtatggtggagtatatgttgattacaataaacaaactgtgagta  678200                                                                                                    <                                                                                                    <                                                                                              <------NtERF2                                                                                             --------                                                                                             ------>NtERF2                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                           <---------LBD16                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                           --------->RAP2.6(3)                                                                                           --------->ATERF1(1)                                                                                      <---------REM1(1)                                                                                      <-----------RAV1(1)                                                                                      --------->ALFIN1                                                                                    --------->ANAC55(2)                                                                                    <------MYB46(1) -            <----------DOF2                                                         <---------ANAC55(2)           <---------ANAC58                                                         <---------ANAC55(1)           <---------ANAC58                                                         <---------ANAC46-           <---------ANAC46                             --------->MYB52(1)          <------MYB83<----     <---------YAB1           ----------->HVH21      <---------At4g35610           --------->MYB59  < -----------GT1     <----------DOF2     --------------->AtSPL8   <---------TOE2(3) --------->MYB111(1)   atataccatgtttgcgtttgggctttgattctgtaacgctgttctgtacaacttgagcaaacggtctaatgtttttatatgtgattaggtgttgccggct  678300 --------->TOE1(2) ---------ANAC58                                                                              <------ ---------ANAC58                                                                              <------ ->LBD16                                                   <---------HSFB2a(1)                <------ -RAP2.6(2)                                                --------->HSFB2a(1)                <------ -ATERF1(2)                                            ----------->GT1                        ------- >ATERF1(2)  --------->At5g28300             --------->ALFIN1                                 ------- -------->ANAC55(2)                        --------->CCA1(2)                     <---------ALFIN1  <- -------->ANAC46                 <---------ANAC58   -------->P              <---------GLK1(1) ------- ------DOF2 ----------->GT1      <---------ANAC58   ------>MYB83          <-------GAMYB      -------- ---------ANAC55(2)            --------->ARR11(3)   ------>MYB46(1)      <---------MYB46(3)  <-------   atacgtgagaagcatggtgaatatatgttgagagagcttgttaagagatgggccaaccagaaaattcttgttagatggttatcccacttcttcgaatatc  678400  Previous    Next  AGI:  At1g02980.1    Description:  CUL2 (cullin 2); ubiquitin protein ligase binding. similar to ATCUL1 (CULLIN 1) [Arabidopsis thaliana] (TAIR:AT4G02570.3); similar to ATCUL1 (CULLIN 1) [Arabidopsis thaliana] (TAIR:AT4G02570.2); similar to ATCUL1 (CULLIN 1) [Arabidopsis thaliana] (TAIR:AT4G02570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70971.1); similar to cullin 1B [Nicotiana tabacum] (GB:CAC87836.1); similar to cullin 1-like protein G [Petunia inflata] (GB:ABB77429.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Cullin homology; (InterPro:IPR016158); contains InterPro domain Cullin repeat-l Range:  from: 677869    to: 681310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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