Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             <---------HSFB2a(2)                                                                    <-----------GT1                                            --------->TOE2(3)------>ZmHOX2a(1)                                          <---------ATHB12  --------->TOE2(3)                <-------                 <---------CCA1(2)  --------->WOX13(1)      --------->TOE1(3)        <-----------GT1         <---------TOE1(2)         --------->AHL20(2)   --------->GLK1(1)  --------->HSFB2a(2)         <---------TOE2(2)         <---------AHL20(2)------------>CBF      <---------------AtSPL8   ggcccaattcccatgttttatatcccacattttagaattaatcaaacattaatctggcaattccttaatttcacattctagtacaaattactggtcttta  672900                                                                                           --------->AHL20(1)                                                                                           <---------AHL20(2)               ----------->GT1                                                   <------------CBF               <---------ZAT6                                           --------->AHL20(2) --------->AHL20(2)            <------ZmHOX2a(1)                                          --------->YAB1     <---------AHL20(2)     <------ZmHOX2a(1)                                                 --------->AHL20(2) --------->AHL20(2)    --------->ICU4        --------->ATHB12                            <---------ATHB12 <---------AHL20(2)   <---------TOE2(3)     <---------YAB1--------->AHL20(2)       <---------WRKY18(1)    --------->AHL20(2) ---DOF2  <---------TOE2(3)   ----------->GT1      <----------DOF2------------>CBF ----------->GT1   gttataaggattaaggagagttaattcatgtttggaaaaaaaaaaatgagaaactttttagttgtttgaccaataaaaatacaaattgttaaattaatta  673000                                                  <---------YAB1                                 --------->YAB1  <---------AHL20(2)                                 ----------->GT1 --------->AHL20(1)                          ----------->GT1        <---------AHL20(1)                     --------->AHL20(2)        <---------YAB1---------->DOF2           ----------->GT1                     <---------YAB1           --------->AHL20(1)                       --------->YAB1                     <---------AHL20(2)       --------->AHL20(2)                ----------->GT1                    <---------AHL20(2)      <---------AHL20(1)            --------->AHL20(2)                    --------->AHL20(2)      --------->AHL20(1)            <---------AHL20(2)     ----   acaaaaaatactaattcaaaattttaattagtgaatcgtaacaaaaaatattatatttcttaagaaagttgaatatttaaattagtgaatcgtaacaaaa  673100                                                                                       <----------DOF2                                                                                      <---------DAG2                                                                                    ------->TEIL                                                                                   <---------ALFIN1                                                                                  --------->ZAT14                                                                            --------->CCA1(2)                                                                            <------ZmHOX2a(2)                                                                            --------->ARR14(1)                                                                           --------->ARR14(3)                                                                           <---------ARR14(3)                                                                           --------->ARR11(3)                                                                           <---------ARR14(2)                                    ---------->DOF2                        --------->ARR14(2)                                  <---------YAB1                           <---------ARR11(3)                                <---------AHL20(2)                         --------->ARR11(1)                               --------->AHL20(2)           --------->CCA1(2)     <---------ZAT14                               <---------AHL20(2)           --------->ARR14(1) --------->At4g35610                            --------->AHL20(2)             --------->ARR11(1)------>ZmHOX2a(2)                        <---------AHL20(1)            <-------TEIL        <---------HSFB2a(1)             --------->YAB1<---------AHL20(2)      <---------ANAC58       <---------GLK1(1) <--------            <---------YAB1 <---------YAB1          <---------ANAC58      ----------->ARR10  <--------       <---------ZAT6   --------->AHL20(1)     ---------->DOF2--------->ANAC58 <---------At4g35610 ----->AHL20(2)      --------->AHL20(2)     <-----------HVH21 --------->ANAC58 --------->LBD16   aaaatgctagtgctattatagaaaaaaatattatttattaaagacccatcaaagcgtacatgatacgctctacagaagatccgctgcacctttactttat  673200                        <------------CBF                 <---------ZAT14                      <---------YAB1                <------ZmHOX2a(1) --------->WRKY18(1)                   ------>ZmHOX2a(1)         --------->AHL20(2)     --------->WOX13(1)            ------------>CBF                 <-----------TBP  --------->ZAT14           <-----------GT1               --------->ICU4  <---------ABI4(2)          --------->KAN4(2)       --------->AHL20(1)              <------------CBF  --------->ZAT18     <---------At4g35610 -DAG2 <---------AHL20(1)          <---------HSFB2a(2)   <---------ZAT18     --------->At4g35610 --DOF2<---------ARR11(3)          --------->HSFB2a(2)   --------->ZAT14 --------->AtLEC2           <   ctgtagcaaaatatttcaatcctgaagattgaacggtccagaattgattatataggaagtgcaccgtagtcagtcatgcagatgactattcccaaatttt  673300                                                          <---------YAB1                                                        <--------HAHB4                                                        --------->YAB1                                                        <---------ICU4                                                       --------->ICU4                      --------->AHL20(2)                                                       <---------ATHB51          <---------MYB55(2)                                                       <---------ATHB12         --------->ANAC58                                               <---------AHL20(2)               ------>MYB83                                              --------->AHL20(1)                ------>MYB46(1)                                              <---------AHL20(2)                --------->ANAC58                                              --------->AHL20(2)                --------->ANAC46                                              <---------AHL20(1)   --------->MYB52(2)   --------->YAB1                                           <---------AHL20(2)    ------>ZmHOX2a(1)   ----------->GT1                        --------->ANAC46   --------->AHL20(2)    <---------MYB52(1)---------->DOF2                        --------->ANAC58  <---------AHL20(2)    --------->TOE2(3)--------->MYB46(3)                        --------->ANAC58  --------->AHL20(2) <-----------GT1  --------->AtMYB61      *TSS ---------->DOF2            <---------AHL20(1)-------->ATHB1        --------->DEAR3(1) --------->ANAC58      --------->ZAT18--------->AHL20(1)<---------AHL20(2)    <---------ALFIN1 --------->ANAC58      <---------ZAT18--------->AHL20(2)--------->ATHB51     --------->MYB46(3) <---- ---------------------WRI1            <---------AHL20(2)--------->AHL20(2) <-----------GT1 --------->YAB1   agctcgaaactctaaaagacgagagcgcgcaaattttgaatttattaatttatttcaattatttttccttagttgaatcaccacccaaagtaataatatt  673400                                                                                    <-------TEIL                                                                                   --------->GLK1(2)                                                                                   --------->CCA1(2)                                                                                   --------->ARR14(1)                                                                                  <---------ARR14(2)                         --------->ZAT14                                          --------->ARR14(2)                         <---------ZAT14                                          <---------GLK1(2)                  --------->ANAC58                                                --------->ARR11(1)                --------->MYB52(1)                                               <---------HSFC1(2)          <---------HSFB2a(2)                               --------->YAB1       <---------HSFB2a(1)          <---------HSFC1(1)              <------ZmHOX2a(1)<<<<<<<<<ARR2         --------->HSFC1(2)          --------->HSFC1(1)       <---------ANAC46        <---------ATHB12      --------->HSFB2a(1) <-----------TGA1 --------->ANAC58<------NtERF2          --------->WOX13(1)     ----------->ARR10 ---TEIL  --------->HSFB2a(2)<-----------RAV1(1)  --------->MYB52(1)     <------NtERF2             <<   catcgtcatgttcgagaagaacggaagaacactgttggcgaagaggaaaacccaagggacaatcaaaaccagggcatcgaagaagattcggaagatggaa  673500                                              <---------GLK1(1)                                 <---------WRKY12                               <----------DOF2                                 <---------WRKY38(1)                           <---------ANAC58                                --------->WRKY18(1)                       <-----------RAV1(1)                               <-----------HVH21  <----------DOF2         --------->HSFB2a(1)     <--                               <--------ZAP1  --------->GLK1(1)      <------NtERF2           <-------                      <----------DOF2        --------->ARR11(3)    <---------DEAR3(1)<---------DEAR3(1)          <-----------HVH21  --------->MYB59 <---------ARR11(3)  <-----------HVH21  <---------At4g35610 <<<<<<<<<<<<<<<LFY --------->At4g35610     --------->HSFB2a(1)--------->SPL7  <---------ANAC58   ---   gggacattggagcgtcactctctgcttcaattcggtcaattgtcgaagatttctttcgaaaatcgtccgtcgtcgaatgttgcttcatcggcgtttcagg  673600              <---------HSFB2a(1)              <---------HSFC1(2)            --------->ARR14(2)            <---------GLK1(2)         <---------ANAC58      <---------GLK1(2)               <------MYB83 <-----------RAV1(2)      <---------ARR14(2)              <------MYB46(1)    ----------------->AG      --------->ARR14(2)              <---------ANAC58   ----------------->AGL1   --------->LBD16         --------->LBD16  <---------At4g35610  --------->LBD16   ------>ZmHOX2a(1)  <---------GLK1(1)     --------->LBD16     <---------ANAC58  <---------LBD16     --------->GLK1(1)     --------->At4g35610 <---------ANAC58 ----------->RAV1(2) <---------ARR14(2) --------->ARR14(2)      <---------ANAC46   --------->TOE2(3) -------GLK1(1)      --------->ARR14(2) <---------ARR14(2)     <---------LBD16   <---------YAB1 --LBD16    <---------ARR14(2)       --------->MYB59 <---------At4g35610     <----------DOF2 ------>GLK1(1)  <---------LBD16   <---------MYB52(1)--------->At4g35610  <------ZmHOX2a(1)   gtctcctggattcggattcttcggaactccgaaatcagttgggttccgctgattcagatgccaattgcggagagaaggactttattcttagccaagactt  673700                <---------DOF5.7(2)                             <---------ARR11(3)              --------->DOF5.7(2)                             --------->DOF5.7(2)              <---------MYB52(1)          <---------ARR11(3)  <---------MYB52(1)             --------->TOE2(3)            --------->ARR11(3) --------->TOE2(3)       --------->ARR14(2)                <---------CCA1(2)  --------->YAB1       <---------ARR14(2)            <---------ANAC46   ------>ZmHOX2a(2)   <-------GAMYB       <---------ARR11(3)        --------->At4g35610   <------ZmHOX2a(2)   <---------MYB46(3)       --------->ARR11(3)        <---------ZAT2       --------->ARR11(3)   --------->MYB46(2)  ----------->GT1 --------->ZAT6 --------->ZAT2       <---------ARR11(3)   --------->MYB111(2) --------->HSFB2a(2)             <---------At4g35610  --------->AGP1  --------->HSFB2a(2) <---------HSFB2a(2)       <-----------ARR10       <---------HSFB2a(2)<---------HSFB2a(2)         <--   cttctggtaaatcttcgttaactctggcatttcttagctgtgtatatctaattcgagatctatcgttatcttctaggtagttgaattttgggattagtta  673800  Previous    Next  AGI:  At1g02965.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02960.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02960.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02960.2) Range:  from: 671661    to: 672814    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02970.1    Description:  WEE1 (ARABIDOPSIS WEE1 KINASE HOMOLOG); kinase/ protein kinase. Identical to Wee1-like protein kinase (WEE1) [Arabidopsis Thaliana] (GB:Q8L4H0;GB:Q9SRY9); similar to CPK29 (calcium-dependent protein kinase 29), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT1G76040.2); similar to wee1 [Glycine max] (GB:AAS13373.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 673306    to: 676378    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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