Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ATHB12                                            --------->WOX13(1)                                           --------->MYB46(3)                                        --------->MYB46(3)         ---------->DOF2              ----------->RAV1(1)                          ---------->DOF2 ------->YAB1                     --------->ANAC46                           <----------DOF2       <- ------->AHL20(2)                 --------->ANAC58          --------->YAB1--------->ARR11(3)    <---- ->TOE2(3)       ------>ZmHOX2a(1)--------->ANAC58 --------->RAP2.6(3)    <---------ARR11(3)    <----   atcaaattccctatagctcctcaaaaaaaactactcaagccaacaacaatcaattcggcaaatcagaagttgccaagttctttctcaaagacaacttctc  669400              <---------DAG2   --------->ZAT14                  ---------->DOF2   --------->ZAT18         --------->MYB52(1)   <---------ZAT14      --------->TOE2(3)                                                  <---------YAB1 <---------GLK1(1)      --------->TOE1(3)          <---------ICU4                         --------->ARR11(3) -----ZmHOX2a(1)      --------->ANAC58           <-----------GT1                          <---------ARR11(3) -------RAV1(2)       --------->ANAC58     <---------TOE2(3)                     <---------DEAR3(1) -----LBD16   <----------DOF2   ------->TEIL   --------->AHL20(2)              ------>ZmHOX2a(1)    <   aggagttcacagagagctttatgcaagcttaacgaatcgaaagttgagattaaacattacctcttgttccttcgcattctccttcggcgaaatatcattt  669500                                                                  ------>ZmHOX2a(2)                        --------->MYB52(1)                       --------->CCA1(2)                     ------>MYB46(1)                             <------ZmHOX2a(2)                  -                     ------>MYB83                               --------->AGP1                   ----                   --------->AtMYB61                            <---------AGP1                   ----         ------>ZmHOX2a(1)                                      --------->ARR11(3)          ---------   <<<<<<<<<TBF1   <---------MYB59                              <---------ARR11(3) <---------At4g35610 <<<<<<<<TBF1---------->DOF2        --------->GLK1(2)       ---------->DOF2        --------->At4g35610   tcttcttcttcctctaaaagaccaaacaacagcttgagaatcactcgatagacaatgaaacacaaagatctaaaatcgaaatttcagatgaagaaaaaga  669600                                   --------->ARR14(2)                                   --------->GLK1(2)                                   <---------ARR14(2)            ------>ZmHOX2a(1)     <---------GLK1(2)      <---------ICU4           ------>ZmHOX2a(2)   <---------ICU4          ----------->HVH21        --------->YAB1     --------->ANAC58            --   --------->YAB1   <---------GLK1(1)         ----------->RAV1(2)      --------->ANAC58            <-  --------->ICU4    --------->CCA1(2)         <---------LBD16         ------------------------>ANAC81  <---------ATHB12  --------->GLK1(1)     <---------GLK1(1)           --------->DAG2               -- -------->WOX13(1) --------->ARR14(2)    <---------ARR14(2)     --------->ANAC58                   -- ----->ANAC58      <---------ARR14(2)    <---------GLK1(2)      ----------->GT1----------->GT1    <-- ----->ANAC58      <---------ARR11(3)    --------->ARR14(2)     --------->ANAC58                 <--- ->DOF2     ==========================HOX2a_HOX2a  <---------YAB1    ---------->DOF2      <---------ATHB12   agcaatcatcagtcctcaccagatatgctctgatcggaatctggattcccctgatgataatccaacaagaaaaaagcaaaacagaaaatcaaatcaatgt  669700                                                                            ----------->HVH21                                                                            --------->ATERF1(1)                                                                           <---------ATERF1(1)                                                                           ------>NtERF2                                                                           <-----------HVH21                                                                          <---------ATERF1(2)                                                                          --------->RAP2.6(2)                                                                          --------->RAP2.3(3)                                                                 ----------->RAV1(1)                                                                 <---------ALFIN1                                                                <------NtERF2                                                               --------->ABI4(1)                                                               ------>NtERF2<------NtERF2                                                               <---------ATERF1(1)                                                              --------->ATERF1(2)                                                              <---------ATERF1(2)                                                              --------->DEAR3(1)                                                              --------->RAP2.6(2)                                                              --------->RRTF1(3)                                                              --------->ANAC46            --------->DAG2                                    --------->RRTF1(2)           ---------->DOF2                                    --------->DREB2C(2)      <----------ID1                                         --------->ERF1<-----------TGA1      ----------->GT1                                        --------->ATERF1(1)    ----------->GT1                                          --------->ORA47(2)  ---------->DOF2                                <--------P  --------->RAP2.3(1)                    < ---->ZmHOX2a(1) --------->ANAC58           --------->MYB52(1)--------->RAP2.3(2)                  -- --------HSFB2a(2)                         <---------WRKY38(1)--------->RAP2.3(3)                 <-- ------->LBD16   --------->ANAC58        <-----------HVH21  <---------RAP2.3(1)                   <-- ------->HSFB2a(2)                      ------->GAMYB <-----------GT1     --------->DEAR3(1) ------>ZmHOX2a(2) -------LBD16--------->ANAC58        --------->MYB52(1)     <---------ATERF1(1)            <---------ARR11(3) ------ANAC46--------->ANAC58    <-------TEIL   <---------MYB52(1)        --------->ANAC46 --------->ARR11(3)   cctggaaagagaaaaaagcaaacaattctcagcgatgcataacagtcaccggtaagttacttcgccgccacattcgccgtcaccgttcaaatcgatcttg  669800                                           <---------GLK1(1)               --------->DEAR3(2)    *TSS  --------->CCA1(2)             <-----------GT1         <---------AtLEC2         <----------DOF2             <---------ANAC58 --------->ALFIN1            <---------MYB52(1) <---------PCF2 ---------MYB52(1)          <-------GAMYB --------->ARR14(2)               <----------DOF2 ------->LBD16<---------At5g28300  <---------YAB1                 <-----------GT1                <--- -------DREB2C(2)    <---------MYB52(1)   <---------ARR14(2) <---------ARR11(3)           <---------- -------DEAR3(1)  <---------MYB52(1) <---------ANAC58        --------->ARR11(3)      <-----------GT1   ccggtgttcgcctttgtaccgtcgtttgcccgttagtatgcttggatatgggcccttgtctgagatattcacttcttcttttttgtataactaattgggc  669900                                                                                                  ---                 --------->AHL20(2)                                                               <--                 --------->YAB1                                                   <---------GLK1(2)            --------->AHL20(2)      <---------YAB1                       --------------->AGL15    --- -------DOF2------------>CBF        <---------AHL20(2)                   <---------------AGL15   ---- --CBF ------------>CBF           --------->YAB1  <---------CCA1(2) <---------AHL20(2)   <----------ID1   tttaacaggcccaattcaataaaactcttccatgttttataatttgttttttatatcccacattttagaattaatctacatatagaattttgggccaaaa  670000                                                                        <---------AHL20(2)                                                                 --------->ANAC46                                                                 --------->ANAC58                                                    --------->HSFB2a(2)--------->AHL20(2)                                           <---------AHL20(1)    --------->ZAT6                                           --------->AHL20(1)    --------->ANAC58        <---------AHL20(2)                 --------->ARR11(3)   <---------TOE1(3) <-----------GT1                   <---------AHL20(2)           <---------TOE2(3) ------>AHL20(1)                   --------->AHL20(2)  <---------ARR11(3) -------ARR11(3)            <---------ARR11(3)      >>>>>>>ZML2<-----------GT1               -------- ------>ARR11(3)            --------->ARR11(3)      <---------HSFB2a(2)<---------AHL20(2)   >>>>>>>>> ----->AHL20(2)       ------>ZmHOX2a(1) --------->AHL20(2)<----------DOF2          <---------MYB52(1)   tatatactatttagtttttatttcctacaatatctatttaaaaaaaatattgttctaggtctttttaacgctattaatttcattcgttatatagaaccaa  670100                                                             --------->AHL20(1)                                                             <---------AHL20(2)                                                             <---------AHL20(1)                                                            --------->AHL20(2)                                                          --------->TOE2(3)                                                         --------->ATHB12                                                         <--------HAHB4               --------->AHL20(2)                                                         <---------ICU4       <---------WOX13(1)    <                                                        --------->ICU4     --------->AHL20(1)     <--                                                        <---------YAB1     --------->AHL20(2) <------         --------->ZAT18                              --------->YAB1       <---------AHL20(1) -------         <---------ZAT18                             <---------YAB1        <---------AHL20(2) <------         <---------ZAT14                       --------->ICU4--------->AHL20(2)       <---------AHL20(2)   --------->YAB1               <---------AHL20(2) --------->YAB1      --------->AHL20(2)     ------- ->MYB46(3)                     --------->AHL20(2)<---------YAB1       <---------AHL20(2) --------->AHL20(2) >>>>>>>>LFY --------->KAN4(2)--------->AHL20(2)<---------ICU4        --------->AHL20(2)  <---------AHL20(2)   tgtaatcagagtgaacatccctattgttctaaatttatattctgaactaaatattatcatcattaaattacatttaattaattgctaattttttaattaa  670200                                                                           --------->AHL20(2)     <---------YAB1            <-------TEIL                              --------->AHL20(2) ---------TOE2(3)             --------->CCA1(2)                     <---------YAB1 -------AHL20(2)         ---------->DOF2                        <---------YAB1 ---AHL20(1)           <---------AHL20(2)                      <---------AHL20(1)            -------- -->AHL20(2)      <---------AHL20(1)                           --------->AHL20(1)            <------- ---AHL20(2)      --------->AHL20(1)                           <---------ARR11(3)           <-------- -->AHL20(1)   --------->AHL20(2)                              --------->ARR11(3)       ----------->GT1   ttaagtttttatagcataaaaatattaaaaagatacaaaatcgtcttggaagtatatcatacaaatatttttgataaaaatataggtctatggtatatct  670300  Previous    Next  AGI:  At1g02960.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G02965.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN80011.1) Range:  from: 666872    to: 669837    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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