Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------ARR11(3)                                                   --------->ARR11(3)                                                   --------->ARR14(2)                                                   <---------ARR14(2)                                                 --------->LBD16              <---------ANAC58                                               ----------------->AGL3 <---------ARR14(2)                                            --------->GLK1(1)         --------->ARR14(2)                                           --------->ARR14(2)      --------->ANAC46               ---                                           <---------ARR14(2)     ------>ZmHOX2a(2)             -----                                         --------->LBD16         <------ZmHOX2a(2)              <----                       <------ZmHOX2a(2)<---------ANAC55(1)     --------->ARR14(2)              -----                      <---------ARR14(2)<---------ANAC58        <---------ARR14(2)              -----     --------->LBD16  --------->ARR14(2)<---------ANAC46        <---------ARR11(3)      --------->WOX13(1)    --------->ANAC46--------->LBD16     <---------ANAC58       <------ZmHOX2a(1)      <---------YAB1   <---------LBD16<---------At4g35610  <---------LBD16       --------->LBD16  <---------ANAC58  ----- ------AtMYB77    <---------LBD16    <---------ARR14(2)     <---------LBD16<---------MYB52(1) <------ ---GT1    <---------MYB52(1)        --------->ARR14(2)    ------>ZmHOX2a(2) <---------MYB46(3)------   gcctctccgcatcgttactctgcggatcagaagttctaagttccgggtctccagatattgatccaggatccgaaaccggtgcttgattatcaatcggcac  651500                                   <------NtERF2                                  ------>NtERF2                                 --------->RRTF1(3)                                 --------->DREB2C(2)                                 --------->RRTF1(2)                                 --------->RAP2.6(2)                                 --------->DEAR3(1)                                 --------->RAP2.3(3)                                 --------->RAP2.3(2)                                 <---------ATERF1(2)                                 --------->ATERF1(2)                                --------->ORA47(2)                                --------->ERF1                                --------->RAP2.3(1)                                --------->DEAR4(2)                                --------->RAP2.6(1)                                --------->ATERF1(1)                                <------NtERF2                               <---------DREB2C(1)                               --------->ABI4(1)                               <---------RAP2.3(1)                               <---------DEAR4(2)                               <---------At4g35610                               <---------ATERF1(1)                               --------->At4g35610                               ------>NtERF2                              --------->DEAR3(1)                              --------->RAP2.3(3)                              <---------DEAR3(1)                              --------->RRTF1(2)                              --------->ANAC46                              --------->ATERF1(2)                              --------->RAP2.6(2)                              --------->RAP2.3(2)                              <---------ATERF1(2)                              <---------ALFIN1                              --------->RRTF1(3)                             --------->ORA47(2)                             --------->RAP2.3(1)                             --------->RAP2.6(1)                             --------->ATERF1(1)                             --------->ERF1       ------>NtERF2         --------->DEAR4(2)      ----------->HVH21      --------->RRTF1(1)      --------->At1g77200   <---------ATERF1(1)      --------->DEAR3(1)    --------->LBD16      ------>MYB46(1)     --------->DEAR3(2)     <---------RAP2.3(1)  ------>MYB83 ------>ZAT14               ------>NtERF2      <---------MYB59 ---->bZIP60(2)             <---------At4g35610------->GAMYB                   --------->YAB1       < -----At4g35610             --------->At4g35610--------->AtMYB61              <-------TEIL          < ---->At4g35610          <---------ATERF1(1)  --------->MYB46(3)    --------->GLK1(1)            ---- ---->ANAC58            <---------ARR14(2)   --------->ANAC58   --------->ANAC55(1)              <--- ---->ANAC58            --------->ARR14(2)   --------->ANAC58   --------->ANAC58             <-------TEIL ---ALFIN1         ------>NtERF2--------->RRTF1(1)              --------->ANAC58           <---------ARR14(2) >NtERF2<------NtERF2 <---------DEAR3(2) --------->ANAC46       --------->ANAC46           --------->ARR14(2)   ctcactcgccgacgaagacgatgccggttccgccgccgcctaaacacaaccaaactcaaaatcaacacgaaattccaaaattcataaaacccagattcaa  651600                                                                                                <----                                                                                            <------MYB83                                                                                            <------MYB46(1)                                                                                           <---------TOE2(2)                                                                                           <---------TOE1(2)                                                                                         --------->TOE1(2)                                                                                    --------->MYB46(3)                                                                                    --------->ANAC58      <------ZmHOX2a(1)                                                             --------->ANAC58   <------ZmHOX2a(1)                                   --------->WOX13(1)           <---------MYB52(2) -----------RAV1(2)                              --------->LBD16               --------->ARR14(2) ---------LBD16                             <---------GLK1(1)              <---------At4g35610------- ----->ARR14(2)                      ---------->DOF2--------->GLK1(2)   ---------->DOF2------->TEIL<- ------ARR14(2)            <----------DOF2  --------->GLK1(1) --------->CCA1(2)<---------ARR14(2)  --   atccaggaggaagagaattgatcaaactcctttctccctaaaatcgaaatccagaatcaagcagagatgagaattgaagcagagccacgaacgtaggtgt  651700                            --------->ALFIN1                          <---------ANAC58                          <---------ANAC46                          --------->TGA1a                       <------MYB46(1)                       <------MYB83                     <--------P                     ===============MYC_MYB                   <------MYB46(1)                   <------MYB83                  --------->MYB46(2)                  --------->MYB111(2)                  <---------MYB46(3)                                                          <------                  --------->MYB55(2)                                                          -------                  --------->MYB111(1)                                                         <------              ------>ZmHOX2a(2) <------ZmHOX2a(1)                                             -------       --------->TOE1(2)  <---------O2                                            <---------ANAC55(2)       --------->TOE1(3)  <---------TGA1a                                         --------->ANAC55(2)       --------->TOE2(2)  <---------ANAC58                                   --------->ANAC55(2)       --------->TOE2(3)<------ZmHOX2a(1)                                    <---------ANAC55(2) ==============================HOX2a_HOX2a                                   <---------O2    <------- ------>ZmHOX2a(2)<---------AtMYB61                                          --------->REM1(1)<------ --------->YAB1 <---------MYB52(1)             <---------At4g35610           --------->O2  --------->YAB1 --NtERF2     =================HOX2a_HOX2a     --------->At4g35610          <-------TEIL -------->P -->ALFIN1    =========================HOX2a_HOX2a                  --------->At4g35610 <-----------GT1 --------ARR11(3) --------->MYB59       <-----------RAV1(1)      <---------At4g35610    --------->WOX13(1) ------->ARR11(3)<---------MYB55(1)  ------->TEIL                --------->At4g35610<---------CCA1(2)   cgatcttaaccttggatcgtttggtaggacgtgaggatgaacttgttgcagcacaaaaacgcttggaagcagaagagctacgtctcgtatcaaccatatc  651800                                     --------->DEAR3(1)                                   <---------ATERF1(1)                                   ------>NtERF2                                   --------->LBD16                                  --------->ANAC46                                  --------->DEAR3(1)                                 <---------LBD16                                 --------->ATERF1(1)                                <---------ATERF1(1)                               <---------ARR14(2)                               --------->ARR14(2)                              --------->ATERF1(1)                             <---------ATERF1(1)                             <-----------HVH21                             ------>NtERF2                            --------->DEAR3(1)                            --------->RAP2.3(2)                           --------->ATERF1(1)                           --------->RAP2.3(1)                           --------->DEAR4(2)                           --------->ORA47(2)                           <------NtERF2                          --------->ABI4(1)                          ------>NtERF2                          <---------ATERF1(1)                         --------->ATERF1(2)                         <---------DEAR3(1)                         --------->DEAR3(1)                         --------->RRTF1(3)                         --------->DREB2C(2)                         --------->RRTF1(2)                         --------->RAP2.6(2)                         --------->RAP2.3(3)                        --------->ATERF1(1)                        --------->DEAR4(2)                        --------->RAP2.3(1)                        --------->ORA47(2)                        --------->RRTF1(1)                        --------->ERF1                        --------->RAP2.6(1)                       <---------ATERF1(1)                       --------->ABI4(1)                       ------>NtERF2--------->RAP2.3(1)      <-----------GT1      --------->TOE2(3) ---ARR14(2)          --------->DEAR3(1)                <---------ARR11(3)        --------->YAB1 -->ARR11(3)          --------->ANAC46------>NtERF2     --------->ARR11(3)        --------->TOE1(3) ---ARR11(3)         --------->MYB46(3)                 <---------GLK1(2) <---------DEAR3(2)--------- -->ARR14(2)        <---------At5g28300                <---------RVE1(1)  <------MYB46(1)   --------- --CCA1(2)     <<<<<<<<<TBF1--------->RAP2.3(3)       ----------->ARR10   <------MYB83   --------->YAB1 ---ARR11(1)<<<<<<<<<TBF1--------->RAP2.3(2)   ---------->DOF2      ---------->DOF2     <---------AHL20(2)   tctctctctaattcttcttcttcaccgccgccgtctccgccgcttgattcaaagaagagattttcactgcaaaagtcggttttatcttaaataataatat  651900                                            --------->GLK1(1)                                           <---------ARR11(1)                                           --------->ARR14(2)                                           ------->TEIL                                           <---------ARR14(2)                                           <-----------ARR10                       ---------->ID1                                          <---------CCA1(2)                    <----------DOF2                                          <---------ARR14(1)             <---------DAG2                                        <---------ANAC58                 <----------DOF2                                        <---------ANAC58              <-----------GT1       --------->At4g35610             <-------TEIL       <------------------------ANAC81      --------->ALFIN1            ---------->DOF2        <------------------------ANAC81 >AHL20(2)                      <---------AHL20(2)   <----------DOF2  ---------->ID1        <-------- >YAB1*TSS     <----------DOF2----------->TBP   <---------ALFIN1     <-----------GT1        ---------   tcagacaagtgctgcaactttctcttcttcttatataaaagttcgtatctccactcttttttttttttttttttcctttttctttgtcatatttctaaaa  652000                                                                      <---------AHL20(1)                                                                      --------->AHL20(1)                                                                      <---------AHL20(2)                                                                  --------->AHL20(2)                                                                  <---------AHL20(2)                       <----------DOF2                            --------->AHL20(1)         <-----------GT1                                         --------->AHL20(2)             -----  <-----------GT1   <-----------GT1                     --------->ANAC58             <---------ALFIN1 -HSFB2a(2)     <---------AHL20(2)                      --------->ANAC58  <-----------GT1      ------ >HSFB2a(2)     --------->AHL20(2)     <-----------GT1  <----------ID1--------->AHL20(2)<----------DOF2   catttaacaagtttccatttttttactttaagaaacaaatttcaccctcgtattagaaacgacaaaaattaattaattacaaaatcagcacttttgacca  652100                       <---------ARR11(3)            --------->GLK1(2)                       <---------GLK1(2)            <---------GLK1(2)           --------->YAB1            <---------AHL20(1)          --------->ICU4             <---------AHL20(2)       <---------AHL20(2)            --------->AHL20(1)      --------->AHL20(2)            --------->AHL20(2)            <----------DOF2  <---------YAB1       --------->ARR11(3)           --------->ARR14(2)                              - ----->DOF2<---------ICU4           --------->YAB1  <---------ARR14(2)<---------------AtSPL8      --- --->AtMYB61         ----------->ARR10            ----------->ARR10--------->ATHB12             -----   aagcattataaaatgatcacaagtagattttgagggaattatattgaagaagtagattctctcattcgcttattggtacagatttaaaaccaaaaacatc  652200                                       <----------ID1                                     <---------ICU4                                     ---------->DOF2                                  --------->YAB1           <---------AHL20(2)   --------->AHL20(2)           --------->AHL20(2)<---------AHL20(2)                                   <---------AHL20(1)   --------->WRKY18(1)       --------->AHL20(2)                                   --------->ARR11(3)  --------->At5g28300      --------->AHL20(2)                                     --------->AHL20(1) ----------->GT1          <---------AHL20(1)                            <---------ATHB12 ------->GAMYB            --------->AHL20(1)                           --------->ANAC58 -------->MYB46(3)       --------->AHL20(2)                            --------->ANAC58            -- ------>MYB52(1)     --------------->AGL15                         --------->ANAC58    --------->At4g35610 ---->MYB46(3)    <-----------GT1<---------AHL20(2)                --------->ANAC58    <---------At4g35610   caacggtcaatatttaaattttgccaaatatatatataataaagacgaattacagaacttaacatagagacccaagcattggaatattttgctgcatgct  652300                        <-----------GT1                       <---------AHL20(2)<------MYB83                               --------->ANAC58                   <---------AHL20(2)    <------MYB46(1)               <---------AHL20(2)          <-             <---------ANAC46            <---------ANAC46             <----------DOF2  <-----------GT1            <---------At4g35610     <-----------RAV1(1)            <---------ANAC58 --------->ANAC55(2)        <-----------RAV1(1)    <---------AHL20(2)                  <---------ANAC58 --------->ANAC46 ------>P <---------RAP2.6(2)  --------->AHL20(2)                 <-------TEIL      --------->ANAC58   ctacctgtttttgtggctgatttttttaatcgtttaatttgttgggtttacatgttgacaacttgacatgcgttttattgcatttcaagtaacattctta  652400  Previous    Next  AGI:  At1g02890.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT1G62130.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G24860.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G02480.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68283.1); similar to hypothetical protein OsJ_033404 [Oryza sativa (japonica cultivar-group)] (GB:EAZ19195.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39989.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (Inte Range:  from: 645092    to: 651906    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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