Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        --------->HSFB2a(2)                      <---------HSFB2a(2)                    <------ZmHOX2a(2)                   --------->GLK1(2)                   <---------ARR11(3)                      <---------ZAT2                   --------->ARR11(3)                      --------->ZAT2       --------->MYB52(1)                                  <---------At4g35610         --------->ANAC58      <-----------GT1------>ZmHOX2a(2)                     --------->At4g35610         --------->ANAC58   --------->YAB1  --------->ARR14(2)                    <---------ALFIN1    <---------At4g35610 ---------->GT1    <---------AGP1                       --------->LBD16      ------>NtERF2 ------MYB52(1)    <---------ARR14(2)             --------->HSFC1(2)         --------->At4g35610 ---LBD16         <------ZmHOX2a(1)               <---------HSFC1(2)         --------->LBD16      --- -ARR14(2)      <---------TOE2(3)                 --------->HSFB2a(1)      <---------LBD16       ---- >ARR14(2)  <----------DOF2        ------>NtERF2  <---------At4g35610   <---------At4g35610     <----   gtctgtaataaccggttttaggatctggaacccatggtgccttctcgcttgaagcttccccagctctcttcttcatctccgcggtcgaaacgcttccatc  624100                   <------NtERF2                  ------>NtERF2                  --------->RAP2.6(2)                 <---------ATERF1(2)                 <---------ANAC46                 --------->ATERF1(2)                 <---------DEAR3(1)                --------->ATERF1(1)                --------->RAP2.3(1)                ------>NtERF2               <---------RAP2.6(1)               ------>NtERF2               <---------ATERF1(1)               <---------RRTF1(1)               <---------RAP2.3(1)              <---------DEAR3(1)             <---------ABI4(1)             --------->At4g35610             <---------At4g35610             <------NtERF2             <---------LBD16             --------->ATERF1(1)            <---------RAP2.3(1)            <---------ERF1  --------->TGA1a                           ---------->DOF2            <---------ATERF1(1)                         <-----------TGA1           <---------DEAR3(1)                           <-----------HVH21           <---------RAP2.3(3)                          --------->TOE2(3)     <---------MYB52(1)     --------->O2               --------->ANAC46--------->DAG2 ------>MYB52(1)<------NtERF2           <---------ARR14(2)  <------NtERF2                         --- ------->HVH21<---------RAP2.3(2)       --------->GLK1(2)--------->TGA2(2)                     <----- -----MYB52(2)<---------RRTF1(2)        --------->ARR14(2)<---------WRKY12<----------ID1       ------   taacgccgttttggctgcggcggcaaaccctcgtctgaagagaatccaaaatccaaaacgtcagcgttttgttaaagcgacgagaaaacagagcaataca  624200                                                                                 --------->DOF5.7(2)                                                                        <---------ARR11(3)                                                          --------->DEAR3(1)     <---------MYB52(1)                                                         <------NtERF2  <---------ARR14(2)                                                         --------->ATERF1(1)   <---------ANAC58                                      <---------SPL7    ------>NtERF2   <-----------ARR10                                     <---------ANAC58   --------->At4g35610    <---------ANAC58                           --------->TOE2(3)           --------->ARR14(2)      <---------ZAT6                           --------->TOE1(3)    <---------DAG2          --------->ARR14(2)                          --------->At4g35610   <----------DOF2         --------->ARR11(3)           --------->HSFB2a(2)       <---------ANAC58  <---------ARR14(2) ------>ZmHOX2a(2)           <---------HSFB2a(2)  --------->MYB52(1) <---------LBD16      <---------AGP1          >>>>> ------>MYB52(1)          <---------ANAC46<---------HSFB2a(2)          <---------CCA1(2)       ------ ----ANAC55(2)            <---------ANAC55(2)<---------ARR11(3)    --------->ARR14(2)          ------ --->ANAC55(2)          <-----------GT1   --------->HSFB2a(2)      <---------ARR14(2)          ------   taacgtttttgtttcagaaacagatgttacctgaaaacggcgttcgagagcttttcggagccgaagacggattggatcttagcgttagcgagagaacgag  624300                                                                          <---------At4g35610                                                                         <---------AGP1                                                                    <-------TEIL                                                                   <---------ARR14(2)                                                                   --------->ARR14(2)                                                                  <---------GLK1(2)      <-----------GT1                                                                <---------TOE2(2)       <---------MYB52(1)                                                         --------->HSFC1(2)            <-------GAMYB-      <---------ANAC46                                   --------->HSFB2a(1)   <---------YAB1<-------   <---------TOE2(3)                                     <---------HSFB2a(1) --------->At4g35610  <-- >>>>>>>>>>>>LFY                            --------->At4g35610<-----------RAV1(2)  <---------At4g35610 --->ANAC58                              ---------->DOF2 <---------HSFC1(2)------>ZmHOX2a(2) <------- --->ANAC46                        ----------->GT1      ----------->ARR10<---------ARR11(3) <-------- --->ANAC58      <-----------GT1  >>>>>>>>>TBF1  ---------->DOF2<---------TOE1(2)   <---------ZAT14<-   ccattgtggtttataggttttacgagttttggagaagaagaaaaacagcgcaaaagagaagtttctcaggttcttgatctgatgactgctgttacctttt  624400 <------NtERF2 -------->LBD16                               --------->GLK1(1) ---DOF2                        <---------CCA1(2) -------LBD16  --------->MYB46(3)      ----------->HVH21                                           <- --DAG2   <------ZmHOX2a(2)   ------>ZmHOX2a(1)                 <------ZmHOX2a(1)              ------ -DAG2    ===========================HOX2a_HOX2a             <---------AtLEC2               <------ZmHOX2a(1) --------RAP2.6(2)            <---------CCA1(2)          <----------DOF2   *TSS     --------->CCA1(2)   tgcggcaacgagatcgaacaaacttggtcgtcctatctctcttgacagatttcaaaatgctttgcaggatagatgagaaggaagagagatgagaggaggg  624500                            <---------ANAC46         --------->ARR11(3)                           <------NtERF2         ---------->DOF2                    <---------ARR14(2)         --------->MYB46(3)                    --------->ARR14(2)        --------->ANAC58           <---------At4g35610           <----------DOF2        <------ZmHOX2a(1)<---------DEAR3(1)   --------->ANAC46                <---------AHL20(2) ----------TBP  <---------At4g35610  <---------TOE2(3) <------------CBF  <---------YAB1       <------ ----->GT1 --------->At4g35610------------>CBF--------->ANAC58        <----------DOF2         <------   tttatatagaggaagcagagcagataggctgcgtcaatttaggctttcacccaaagttattgttttctgtttcttttgatttttttttttgggtttaggg  624600                        --------->AHL20(2)          <---------REM1(1)        <-------GAMYB   <---------AHL20(2)       --------->MYB52(2)<---------YAB1                                                  <---------AHL20(2)    ------------>MYB.PH3(2)                                                              --------->AHL20(1)  <---------TOE2(3)    --------->AHL20(2)                                                --------->AHL20(2)  <---------TOE1(3)    <---------AHL20(2)                                          <---------AHL20(2) ---------->DOF2       --------->YAB1                    <-----------GT1    <---------LBD16   <------ ---TOE1(3)         --------->YAB1         <---------MYB52(1)        <-----------GT1    --------->AHL20(2) ---TOE2(3)        <---------YAB1   ---------->DOF2 <---------AHL20(2) --------->ANAC55(2)   --------   ttttaaagttagttgtaacttataattaaaattgttttcaaagtcgttttgtatgtaattaacaacttgttttacttatctggatttaaaattaattaac  624700                                                                          <---------YAB1                                                              <---------WRKY12                                                 --------------->AGL15    <---------AHL20(2)              --------->ZAT18                    <---------------AGL15    --------->AHL20(2)       --------->CCA1(2)  <---------WRKY18(1)    <----------DOF2  ------->GAMYB -----GT1     <---------ZAT14              <-----------GT1    <---------WRKY38(1) ->AHL20(2)   --------->ZAT14             <-----------GT1    --------->WRKY18(1) <-------TEIL <------   tcatctaatatacaagtatactatagtttgaccaaaaccaatttttatcttcttttttttgtagtcaaccgaaaatataaatgttcatatatgaaattac  624800                                              <---------RVE1(1)                                              <---------CCA1(1)                                             <---------ARR11(3)           <---------WOX13(1)                                             --------->ARR11(3)   --------->ATHB51                                            <<<<<<<<<RAP2.2       -------->HAHB4                    -                                      <---------AHL20(2)          <---------ICU4                  ---                                     --------->AHL20(1)           <--------ATHB1             <-------                                     <---------ARR11(3)          <---------AHL20(2)      <---------RVE1(1)              <---------ICU4         <---------AHL20(1)          <---------ATHB51<---------AHL20(2)<-     <---------ANAC55(2)          --------->YAB1                 --------->AHL20(2)      <---------CCA1(1)     --------->ANAC55(2)        <---------TOE2(3)     <-----------GT1   --------->ATHB12<---------ARR11(3)    ------->TEIL              <---------AHL20(2)  <---------AHL20(2)   <---------YAB1   --------->ARR11(3)    <-------TEIL      ---------->DOF2--------->ARR11(3)      ------>ZmHOX2a(1) <---------CCA1(2)  <-- -----GT1  --------->YAB1     --------->AHL20(2)  --------->AHL20(2) --------->YAB1    <<<<<<<<<RAP2.2   catatgtacgtattcataatgctcaaaagaaattaatgatatatttagatatttttttatctcctaaataattgtgattgcatatatttagatatttttt  624900                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC46                                              <---------ALFIN1                                       <---------SPL7<------NtERF2                                    --------->At4g35610                                    <---------At4g35610                            <---------ATHB12 ------>MYB46(1)    ------>ZmHOX2a(1)      --------->ANAC58  ------>MYB83                               --------->HSFB2a(2) ----->ZmHOX2a(2)          --------->ANAC58  -------->P  ---------->DOF2                --------->YAB1 ------>ARR11(3)           --------->ANAC46--------->AtMYB61                         <----------DOF2 --AHL20(2)             --------->MYB46(3)<---------MYB55(2)                     <----------DOF2 --------GLK1(1)      <---------ARR14(2)  --------->DEAR3(2)                <-----------GT1<---------GLK1(2) -------ARR11(3)      --------->ARR14(2)  --------->MYB46(3)      <------NtERF2<---------DAG2   gatctcctaaactaaattgagtcggaaccactcaattctgccgaaccaacacggcctcaaaaagagtcggccatttagtcactctttctttcagaatttt  625000  Previous    Next  AGI:  At1g02820.1    Description:  late embryogenesis abundant 3 family protein / LEA3 family protein. similar to SAG21 (SENESCENCE-ASSOCIATED GENE 21) [Arabidopsis thaliana] (TAIR:AT4G02380.1); similar to late embryogenis abundant protein 5 [Nicotiana tabacum] (GB:AAC06242.1); contains InterPro domain Late embryogenesis abundant protein 3; (InterPro:IPR004926) Range:  from: 623765    to: 624475    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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