Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                               ------                                                                                               ------                                                                                              <------                                                                                             <-------                                                                                             --------                                                                                             <-------                                                                                             --------           --------->YAB1                                                                    <-------      ------>NtERF2                                                                          --------      --------->LBD16                                                                        <-------     --------->ANAC46                 --------->ATHB12            <----------DOF2       --------->ALFIN1    <---------LBD16                  <-------TEIL         --------->ARR11(3)        --------->LBD16-- ----->LBD16                        <--------P            <---------ARR11(3)       <---------TOE1(1)- ---->ANAC58                      ----------->GT1     =============================================== ---->ANAC58                     <---------TOE1(3)    ---------->DOF2         <---------ARR11(3)  <-- ---->ANAC46                     <---------TOE2(3) <-----------HVH21     <------ZmHOX2a(2)   <------- -----ANAC55(2)                  --------->DAG2   <----------ID1  =================================== ---->ANAC55(1)            <-----------HVH21<---------ANAC58 <----------DOF2  --------->ARR11(3) ---- ---->ANAC55(2)       <------ZmHOX2a(1)     <---------ANAC58 ========================================   gtaatctccggcatcataacaagaggacgggtcataaggttgataggcgtaagcgtcaaagttcttttcttttggatcaacatctccgaggtgtctcgtg  621100       --------->O2    --------->DEAR3(1)    ----------->HVH21   <------NtERF2   --------->ATERF1(1)  <---------ATERF1(1)  ------>NtERF2 <---------DEAR3(1) --------->DEAR3(1) -------->RAP2.3(1) ------NtERF2 --------ATERF1(1) --------RAP2.3(1) ------>ATERF1(2) -------ANAC46 -------DEAR3(1) -------RAP2.6(2) ----->TGA1 ----->HVH21 -----HVH21 --TGA1a ->TGA1a --O2  <---------O2 ->O2------>NtERF2 --ANAC58                                                    --------->ETT(2) ->ANAC55(2)                 <---------At4g35610          <---------ANAC58        <---------ANAC46 --ANAC58                 <---------At4g35610      --------->ANAC58             <---------MYB46(3) ---->NtERF2           <------MYB83                --------->ANAC58           <-------GAMYB -------->ATERF1(1)    <------MYB46(1)         --------->ANAC58              <---------MYB46(3) ==bZIP_DOF           <---------TOE1(2)     --------->HSFB2a(2)             --------->ALFIN1 -------RAP2.3(3)     <---------AtMYB61     <---------HSFB2a(2)       ---------->DOF2 --ANAC55(2)          <---------DEAR3(1)--------->GLK1(1) <---------ANAC58  <---------AtMYB61 ==bZIP_DOF   --------->ARR11(3)      <------ZmHOX2a(1)   <---------ANAC46--------->ALFIN1 ----->RAP2.6(3)     <---------MYB52(1) <---------GLK1(1)<-----------------------TaNAC69(2)   <------ ==bZIP_DOF   <---------ARR11(3)<---------LBD16--------->ANAC58   --------->At4g35610   <---------AHL20(2)   acggcgacgacgtcgagttcttcgttggtgctgcttcggaggagttctcgagcaagtatttcgtggacagcccaaagtgtggttgtgggtttaattgtta  621200                                                     <---------AHL20(1)                                                     --------->AHL20(1)                                                  --------->AHL20(2)                                                  --------->YAB1                                                 <---------YAB1                                                --------->AHL20(2)           <---------ZAT2     -----                                               --------->YAB1           <------NtERF2         -------                                            --------->YAB1              <---------HSFB2a(2)<---------YAB1                                           <---------YAB1          --------->ANAC58  --------->ATHB12                 ---------->DOF2           --------->ICU4--------->AHL20(2)  <---------At4g35610<----     <---------CCA1(2)                  <---------MYB52(1)         --------->ANAC46 --------->ICU4   <---------CCA1(2)             ---------->DOF2<---------AHL20(2) --------->ANAC58 <---------YAB1 ---YAB1     ------>ZmHOX2a(1)<----------DOF2 <---------YAB1 --------->AHL20(2)  <---------MYB52(1)<-   taggcctatctcttcctcttaaagcccatgggccttaaagctgttatgattataatatataaaataaacacggcctcgaagctgttatgatttatgaata  621300                    <<<<<<<<<<MYB80                   <------MYB83         --------->ZAT6     --------->AHL20(2)   --------->YAB1 <---------AtMYB61 <---------AHL20(2)<---------MYB46(3)                                                 --------->bZIP60(2) --------->AHL20(2)<------MYB46(1)                                                    --------->ANAC58 ---->AHL20(1) <-----------RAV1(1)                                                    --------->ANAC58 >TEIL <-----------GT1                                                         ---------->DOF2 -----ARR11(3) <---------ZAT6                                                  ====================== --------AHL20(2)<---------MYB52(1)                   <---------YAB1     <----------ID1   tataaaaataaacactactgttggtttaagcccaaaattagcccatgtgaagaattttgtttgttttgaaacaaaatgacaaaaagacacctcatgggct  621400             <---------ANAC46           --------->REM1(2)          --------->ALFIN1         <-------MYC3         ------->MYC3         -------->ABF1         ------->MYC4         <-------MYC4         ------->MYC2         <-------MYC2        <--------ABF1                                                                       ---------        --------->ANAC55(2)                                                                 ---------        <---------O2                                            --------->At4g35610         <--------        --------->O2                                         *TSS                           ---------        <---------TGA1a <-------GAMYB                    ------>ZmHOX2a(2)                  <--------        --------->TGA1a<------MYB83                 =================================================        <---------ANAC55(2)                         <----------DOF2                         ---------        ========================MYC_MYB            <---------ANAC58              ====================   --------->bZIP60(1) ----------->GT1             <---------ANAC58      <---------At4g35610---------   <---------bZIP60(1) <------MYB46(1)             <---------ANAC46      <---------ZAT2     <--------   ----------->HVH21  --------->MYB59<---------ANAC58   <---------At4g35610      ---------->DOF2 <---------ICU4   <---------MYB46(3) <---------ANAC58  <---------ARR11(3)--------->At4g35610--------- =================bZIP_DOF           <---------ANAC46  <---------AGP1   ------>NtERF2       =========   tactgatgacacgtgtcgagttgttcggttaaaacgatgtcgtgtttatggtcgcttgatctgatcagatgtgccagctatacaaaagtctctcacgtct  621500  --------->LBD16 --------->HSFB2a(2) <---------HSFB2a(2) >O2 >TGA1a                           <---------ANAC46 -O2                            --------->MYB52(1) >ANAC58                       ----------->TGA1 -TGA1a                        ----------->HVH21 =bZIP_DOF                  --------->DAG2 >ANAC46                   ---------->DOF2                              <---------------AGL15 =bZIP_DOF              --------->LBD16     --------->GLK1(1)    --------->TOE1(3) >ANAC58                ------>NtERF2    --------->ANAC58        --------->TOE2(3) -ANAC55(2)            --------->DEAR3(1)--------->ANAC58 --------->YAB1--------->TOE1(3)           - >ANAC55(2)     <---------AHL20(2)<---------ANAC55(2) ----------->GT1   <---------MYB59 <---------At4g35610 =====================================bZIP_DOF    --------->MYB52(1)    --------->TOE2(3)          --   ctcccagaaaactcttattttatcgccgagaaagtgacggaaaacgaaatccaaacgggataataaacctaaaacctaaattagtgatttagctacgact  621600                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                  ---                                  <---------YAB1                                                 ----                                <---------ICU4                                                   ----                                --------->YAB1                                                   ----      <-------TEIL             <---------ATHB12                                                  ----     --------->CCA1(2)  <---------SPL7                                <---------AHL20(2)         ---- --------->DOF2        --------->TOE2(1) --------->At4g35610      <----------DOF2    --------->ANAC46 ---->ZmHOX2a(1)       --------->TOE1(1) <---------At4g35610 <<<<<<<<<TBF1 <-----------GT1      <----   cctaaagattcaaatttgggttacatcggacgaatcatgactctgcttccgatttcaatcttcttcttctttttattttgcattccttcgccattaatcg  621700          ----------->TGA1      <---------TOE2(3)     <---------DOF5.7(2)     --------->MYB52(1)   <---------MYB52(2)   --------->DOF5.7(2)  ------>NtERF2  <---------At4g35610  --------->At4g35610 --------->RAP2.3(2) --------->RRTF1(3) --------->DEAR3(1) --------->RAP2.6(2) -------->RRTF1(1) -------->RAP2.3(1) -------->ATERF1(1) ------NtERF2 --------ATERF1(1) ------->ABI4(1) ---->NtERF2                  --------->ZAT14 --------RAP2.3(1)            --------->ZAT18 -------DEAR3(1)              <---------ZAT14 ------>RAP2.3(2)             <---------ZAT18                             ---------->DOF2 ------>ATERF1(2)             --------->SPL7                       --------->HSFB2a(1) ------>DEAR3(1)            <---------SPL7                         <---------HSFB2a(1) -------ATERF1(2)          <---------ANAC46                        --------->HSFC1(2) ------>RAP2.3(3)          <---------ANAC58                      --------->ARR14(2)      <---------At4g35610 ------>ANAC46             <---------ANAC58                      <---------ARR14(2) <---------bZIP60(1) ----->ORA47(2)           --------------->AtSPL8                 <---------GLK1(2)  --------->bZIP60(1) ----->ATERF1(1)          <------NtERF2                        <------NtERF2     <---------AtMYB61 ----->DEAR4(2)          ------>NtERF2               <----------DOF2     ------>ZmHOX2a(1) <---------YAB1 ----->ERF1             <---------DEAR3(1)       --------->REM1(1) <---------HSFC1(2)<-----------HVH21 ----->RAP2.3(1)      --------->MYB52(1)  ---------->DOF2  <-----------HVH21     --------->ALFIN1 -----ATERF1(1)     --------->DEAR3(2) ------>ZmHOX2a(1)  --------->ANAC46--------->MYB52(1)   ccgccgctaacgatgacgatataccgacggcgtacactctcctccaaagctacaactttcccgtcgggattcttcctaaaggagtggtgtcatatgattt  621800                       --------->ANAC55(2)                      <-------MYC3           --------->ARR14(2)                                    --                      ------->MYC3           <---------ARR14(2)                                    <-                     --------->ANAC46    --------->ZAT14                                          <--                    <---------LBD16      <---------ZAT14                                        -----             <---------WRKY38(1)         <---------ZAT18                                    <--------           <-----------HVH21     --------->MYB46(3)                                     --------->GLK1(2)   agataaatctactggtcaattccacgcgtatttcaacaaatcgtgcagtttcgctcttcaaggctcttaccaattggattacaaatcgacaatctctgga  621900                                <---------ANAC46                                <---------ANAC58                                <---------ANAC58                            --------->DEAR3(2)                           -------->P                           --------->MYB52(1)                       --------->At4g35610  --------->MYB52(1)   <---------HSFC1(2)  --------->ARR14(2)   --------->HSFC1(2)  <---------ARR14(2)   <---------At4g35610                                          --------->MYB52(1) ------->ANAC55(2)    ------->TEIL            --------->ARR11(3)                   <------ZmHOX2a(1) --------ANAC55(2) --------->ANAC46           <---------ARR11(3)                 --------->MYB59 -----TEIL      <------ZmHOX2a(2)         ---------->DOF2                <---------TOE1(3) ---->ARR14(2) --------->ARR11(3) ----------->HVH21                      <---------TOE2(3) -LBD16        <---------ARR11(3) --------->ALFIN1     <-----------RAV1(1)----------->GT1   tacatatcggagaacaagatcacgaagcttaccggcgtgaaggtgaaagttctcttcttgtggctcaacatcgttgaggttattaggaacggagacgaac  622000  Previous    Next  AGI:  At1g02813.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02360.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74021.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) Range:  from: 620678    to: 621289    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g02816.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G02370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40037.1); contains InterPro domain Protein of unknown function DUF538 (InterPro:IPR007493) Range:  from: 621461    to: 622469    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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