Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------YAB1                                                               --------->LBD16                                                              <---------ANAC55(1)                                                     --------->HSFB2a(2) <---------ZAT18                                             --------->ATHB12 --------->ANAC55(2)                                            <---------ATHB12  <---------ANAC46                     --                                         <---------AHL20(2)   <---------ANAC55(2)               -----            --------->AHL20(2)          --------->AHL20(2)    <---------ANAC58         --------->YAB1   ------>MYB83                     --------->ARR11(3)        <---------ANAC58        <---------ATHB12   ------>MYB46(1)                  <---------ARR11(3)     --------->GLK1(2)        --------->WOX13(1) ---------GT1                   --------->ANAC55(2)  <---------HSFB2a(2) --------->ZAT18      <------   ttacctagcaaagttttaatacttcaacaagcttacatgatattaaatcatttgtctcgaaattccgtgttatgatgcactaatgtcaatcaaactatta  617900                                                          --------->ANAC58                     --------->MYB52(1)                   --------->ANAC58                     <---------DOF5.7(2)                 <-------TEIL                    ----------->HVH21                   --------->CCA1(2)                  --------->ANAC55(1)                   --------->ARR14(1)                  --------->ANAC55(2)                  --------->ARR14(2)                  --------->ANAC58                     <---------ARR14(2)                  <---------ANAC55(2)        <---------ICU4                                <---------ARR11(3)                  --------->ANAC46           --------->YAB1                                --------->ARR11(3)           --------->YAB1                   <---------ATHB12                               <---------ICU4         <---------ARR11(3)                 --------->ICU4<---------ANAC55(2)              <---------AHL20(1)         --------->ARR11(3)          <-----------GT1   --------->ARR11(1)                  --------->AHL20(1) ------->YAB1     --------->ANAC58--------->YAB1     ----------->ARR10          --------->AHL20(2) ---->YAB1<---------YAB1        <---------YAB1  --------->YAB1            <---------ANAC55(2) ---YAB1--------->YAB1 <------------MYB.PH3(1) <---------YAB1             --------->ANAC55(2) <------   ataaaaacaaatatcataacaggtaacggctactattaataactcaattatcatcgagatacgcatatagatagacacataatcaaatactaatattttc  618000                                                                             <---------AHL20(2)                                                                      --------->ATHB12                                                                     <---------YAB1               <---------AHL20(2)                                    <---------ATHB12              --------->AHL20(2)                                     --------->ICU4              --------->AHL20(1)           <----------DOF2         <---------At4g35610              <---------AHL20(1)   --------->CCA1(2)           --------->ARR14(2)   <----------DOF2--      --------->TOE1(2)           --------->ARR14(2)           <---------ARR14(2)<-----------GT1   --      --------->TOE2(2)           <---------ARR14(2)--------->At4g35610   ----------->GT1          -- -----GT1   ------->TEIL     --------->MYB52(1)     <---------At4g35610 <---------YAB1        <------   tctataaacgtatgaatataatgttctgcaataacagataggcatctttgaataagcagacagagtttccgatgattagtaaattactttctgcaaacaa  618100                                                                                                  ---                                                                                                  ---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----       <----------DOF2                                                                        ------- -------->P                                                                            --------->AHL20(2) ------>MYB83                            <---------YAB1   --------->YAB1               <---------AHL20(2) ------>MYB46(1)                    <------ZmHOX2a(1)    <---------YAB1               --------->AHL20(2) ------->AtMYB61                    ================HOX2a_HOX2a    --------->YAB1 <---------AHL20(2) ------->TOE1(2)                 <-----------RAV1(2)    <---------ARR11(3)     <---------AHL20(2) --- ------->TOE2(2)            --------->WRKY38(1)         --------->ARR11(3)     --------->AHL20(2)---- ---MYB52(2)<---------YAB1  --------->WRKY12 ------>ZmHOX2a(2)    <---------YAB1  --------->AHL20(2)-   acctacgcgtttttatgactcccaaacgagttgactcaggattatgatcgcattacaatatcatagttatcatacacatattaaaaaattaaaatggacc  618200       ------>ZmHOX2a(1)       <---------YAB1 ----->P --->MYB83 -----MYB111(1)       --------->ZAT14 -----MYB59 --------->YAB1 -----MYB111(2)      <---------ALFIN1         ---------->DOF2 -----MYB46(2) --------->YAB1    <-----------GT1 >TEIL--------->TOE2(3)<---------ALFIN1     --------->TOE2(3) --->MYB46(1) <---------ATHB12   --------->ANAC46                       --------->HSFB2a(2)     <---- ----->MYB55(1)<---------ICU4----------->TBP--------->TOE1(3)       <----------DOF2 <---------GLK1(2) -------->TOE2(3)   --------->ANAC46  --------->ANAC46           *TSS   <---------HSFB2a(2)   -------   tacctcatcctcattaatcatcaccacacttatataaaccacttaacctaaagtttgtattcacataaaactttccagtaccaatggaatctccaatatt  618300                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         --------->ARR14(2)                                      <---------ANAC58                               <---------LBD16                                      <---------ANAC58                               <------NtERF2                                  <---------ANAC58                                  ------>NtERF2                                  <---------ANAC58                                 --------->ANAC46                                --------->ARR11(3)                                 --------->DEAR3(1)              --------->YAB1 <---------ICU4                                        <---------DEAR3(1) ---TEIL     <---------YAB1 <---------ATHB12            --------->YAB1--------->GLK1(2)--------->LBD16 -->YAB1--------->ZAT6    --------->WOX13(1) --------->HSFB2a(2)    --------->MYB46(3) <---------ATERF1(1)   cattctcatcacactatcattctttcttcaatcagttcttgcttcttctcaaactctatcaaactcttcaacaatctgcaaaacgacgccggatccaaag  618400                                                             --------->LBD16                                                            --------->ANAC58                                                            --------->ANAC46                  --------->ANAC46                          --------->ANAC58                      ---             <-----------GT1                               <---------LBD16                       ----          <---------MYB52(1)                             <---------ARR14(2)              <---------AHL20(2)     --------->ARR14(2)                                  --------->ARR14(2)             <---------AHL20(2)     --------->GLK1(2)          --------->ICU4  <---------MYB46(3)                      --------->AHL20(1)     <---------ARR14(2)   --------->ANAC58  <---------RAP2.6(2)          --------->YAB1 --------->AHL20(2)    <---------GLK1(1)     --------->ANAC58 --------->RAP2.6(3) ---------->DOF2          <---------AHL20(1)   tattgcaaatccgtttttccacatagccaaggcaatgttcaacaatacggctgtttctctatccgcaaatcgctatcgcaatcgcgaaaatttattcgca  618500                                                 --------->YAB1                                                <---------YAB1        --------->CCA1(2)                    <---------MYB52(1)       --------->ARR11(3)                   <-------GAMYB       <---------ARR11(3)                   <---------RAP2.6(3) --------->ETT(2)      ------->GAMYB     ------>MYB83<---------ZAT18 <---------ETT(2)--------->ANAC58        ------>MYB46(1) ------>DEAR3(1) --------->ANAC58     ----------->RAV1(2)             <---------MYB52(1) ----->DEAR3(2)  --------->ANAC46--------->TOE2(3)   --------->ZAT14 <---------RAP2.6(3)   ccgtcgatagatatatcaaacgcaacgctcatttatctcaacctgccgttatcagagctctccaagattgccgttttctcgccggtctaacaatggatta  618600                                  <---------At4g35610                                  --------->At4g35610                               --------->TGA2(2)                              <-----------HVH21                              <-----------TGA1                             <---------ANAC55(2)                             --------->ANAC58                                                       -                             --------->ANAC55(2)                                                    -                             --------->ANAC46                                                       <                             --------->ANAC55(1)                                                    -                             <---------O2                                                          <-                             ===========================bZIP_DOF                --------->AtLEC2   <-                             ===========================bZIP_DOF            ------>NtERF2          <-                             --------->ANAC58                              <---------ETT(2)        --                             --------->O2                                  --------->ANAC58       <--                             <---------TGA1a                             <---------ATERF1(1)      ---                             --------->TGA1a                            --------->DEAR3(1)       <---                             --------->bZIP60(2)           <---------ANAC58--------->ANAC46      ----                           <---------ALFIN1                <---------ANAC58--------->ANAC58      ----                      <---------DOF5.7(2)                <-----------HVH21<------NtERF2          <---                    <---------MYB52(1)                --------->At4g35610------>NtERF2         <-----                    --------->DOF5.7(2)             --------->MYB46(3) --------->DEAR3(2)   =========         <---------SPL7 --------->ANAC46     <----------DOF2       ---------->DOF2          <--------   cctcttaacgtcgttcgaaaccgttaacgacacgtcagcaaaaacctctttcaaaccgctgtcgtttcccaaagccgacgacatccaaacgcttctttcc  618700     ------>NtERF2    ----------->HVH21    --------->WRKY12                                                ----------->GT1    --------->WRKY45                                          ------->PIF5    --------->WRKY38(1)                                       <-------MYC4   --------->ATERF1(1)                                        <-------PIF5   <------NtERF2                                              <-------MYC3  ------>NtERF2                                               <-------MYC2  <---------At4g35610                                         ------->MYC4  <---------ATERF1(1)                                         ------->MYC3  --------->At4g35610                                         ------->MYC2 <---------DEAR3(1)                                          <---------ANAC46 <---------ANAC46                                            <---------O2 -------->RAP2.3(1)                                          --------->O2 -------->ATERF1(1)                                          <<<<<<<<<<HY5        --------->ATERF1(1) ------NtERF2           <---------ANAC58                     --------->PIF3(3)   <---------ATERF1(1) ----->NtERF2           <---------ANAC46                     --------->TGA1a     ------>NtERF2 --------ATERF1(1)      <---------ANAC58                     <---------PIF3(3)  <---------O2 --------DEAR4(2)  --------->O2                              <---------TGA1a    --------->O2 --------RAP2.3(1) ==========================MYC_MYB         ====================================bZIP_DOF ---->NtERF2       <---------ANAC58          <---------At4g35610  <---------ANAC46<------NtERF2 -------DEAR3(1)   --------->TGA1a           <------NtERF2  ------>NtERF2       --------->DEAR3(1) ------>ANAC46     <---------O2<------ZmHOX2a(1)       <---------LBD16       --------->DEAR3(1) ------At4g35610   --------->ANAC55(2)      --------->RAP2.6(2) --------->WRKY38(1)   <----------DOF2 ----->At4g35610   <---------ANAC58      --------->DEAR3(1)<---------ALFIN1 --------->DEAR3(2) ----->LBD16       <---------bZIP60(2)  --------->ANAC46 ------>NtERF2     --------->MYB52(1) ------LBD16       <---------TGA1a      --------->ANAC58 --------->LBD16  --------->ARR14(2) ----LBD16    --------->At4g35610   -------->P    <---------YAB1--------->ZAT18 <---------DEAR3(1) ============================bZIP_DOF   --------->ANAC58--------->ANAC46  <---------ARR14(2) --DOF2       <---------At4g35610   ===================================MYC_MYB --------->RAP2.3(1)<<<   gcggcgctgactaatgagcagacgtgtcttgaaggacttaccacggccgcttcttattccgccacgtggactgtaagaaccggcgtcgctttgcctctcg  618800  Previous    Next  AGI:  At1g02810.1    Description:  pectinesterase family protein. similar to ATPMEPCRB, pectinesterase [Arabidopsis thaliana] (TAIR:AT4G02330.1); similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G47550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40042.1); similar to papillar cell-specific pectin methylesterase-like protein [Brassica napus] (GB:AAK84428.1); similar to pectin methylesterase 3 [Pyrus communis] (GB:BAF42040.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR01 Range:  from: 618265    to: 620480    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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