Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ANAC46             --------------->AGL15             <---------------AGL15    ------>ZmHOX2a(1)                                  --------->ANAC46            <-----------------AGL1   --------->TOE2(3)                          <----------DOF2        --------->YAB1            <---------ARR14(2)                      ------>ZmHOX2a(1)        <- ------>AHL20(1)                  --------->ARR14(2)            --------->GLK1(1)      <-----------GT1 -------AHL20(1)            --------->WOX13(1)      --------->ANAC58  <---------ARR14(2) --------->O2 ----->AHL20(2)           <---------YAB1            --------->ANAC58  --------->ARR14(2) <---------O2   tatataacaacaatactcgaaatggaacatcattcaaatcctcagtctattaagaagcaatatcagaaatcaaatcctctagctttgattcacgagacaa  609100                                                    --------->ANAC58                                                  ---------->DOF2                                                 ------>MYB46(1)                                                 ------>MYB83                                                 -------->P                         --------->At5g28300        <---------REM1(2)                   <---------ALFIN1          ------>ZmHOX2a(2)       --------->HSFB2a(2)           --------->At5g28300             <------ZmHOX2a(2)       <---------HSFB2a(2)          --------->TOE2(3)               --------->ARR14(2)    --------->AGP1                  --------->TOE1(3) <---------ARR11(3)    <---------MYB52(2)  ----- ----------GT1                      ----------->GT1 --------->ANAC58<---------ARR14(2)       <-------   atcacagttctacaaggcctataactagagaaatgaaaccgtaacaacacctacaagctctaaattttcagatcggaaacaaacacagtgattcaacacc  609200                                                                          --------->MYB52(1)                                                                  ----------->RAV1(1)              <-----------HVH21                                --------->ANAC46          --------->AtMYB61                    ---------->DOF2 --------->ANAC58          <---------ALFIN1               ---------->DOF2       --------->ANAC58                    <-         --------->MYB46(3)             --------->YAB1        --------->DAG2                     ----      <---------ETT(2)               --------->YAB1          ---------->DOF2--------->LBD16    <----- ---->TOE1(2)--------->DEAR3(1)   ----------->RAV1(1)   ----------->GT1   <---------LBD16   <-------- --ALFIN1<---------MYB55(2)    <------ZmHOX2a(1)   <------ZmHOX2a(1) ----------->RAV1(1)--------->AtLEC2   taagaccgtctaccaccgtcgcagacaaacacaggacaacaataaaagtaaaaggatgaagaaaaaagcaacaacatacgggaattggccatggagatgt  609300                                                                    --------->HSFB2a(2)                                                            <---------ZAT2        <---------MYB52(1)                       ----------->HVH21----------->RAV1(2)       <-------GAMYB                  <---------ALFIN1   --------->DEAR3(1)      <---------ANAC58               --------->LBD16     <---------ANAC58      <---------ANAC58              --------->ANAC46     <---------ANAC58   <----------DOF2                  --------->ANAC58    ------>NtERF2  <---------HSFB2a(1)               --------->LBD16     <------NtERF2   <---------At4g35610 -----NtERF2                        --------->ANAC58   <---------RAP2.3(1) ----->ETT(1)                      --------->HSFB2a(2)<---------DEAR3(1)--------->At4g35610  <------- ------HVH21                       <---------HSFB2a(2)<---------RAP2.6(2)                    <------- -At4g35610    ------>ZmHOX2a(2)   <---------LBD16   <---------LBD16<---------HSFB2a(2)    <---------   cggagctttcgttgggatcgagccaaactttgcccttcccgcacttcatcactgatgcggcgagccgcttctggagcttcagagaaaccatttttgcttc  609400                        <------NtERF2                      <---------ANAC58                      <---------ANAC58                      <---------ANAC46                   <---------DEAR3(1)                   ----------->HVH21                   <---------AtMYB61                   --------->ALFIN1                 <---------ANAC46                 <---------ANAC58                 <-----------RAV1(1)        --------->LBD16--------->LBD16                                                       --------       --------->HSFB2a(2)                                                                   <-------       <---------HSFB2a(2)                                                              <----------DOF2  <----------DOF2--------->ALFIN1                            <-----------GT1            <---------DAG2  <---------DAG2 <---------REM1(1)                       <---------AHL20(2)          ------>ZmHOX2a(1) <---------DAG2  <---------ANAC58                        --------->AHL20(2)      <---------ARR14(2) --ANAC58      <------MYB83    --------->ATHB12  ---------->DOF2                --------->GLK1(1) --ANAC58      <------MYB46(1)--------->ICU4  --------->ANAC58   *TSS           <---------GLK1(1)---- --GT1<---------LBD16<---------LBD16          --------->ANAC58   ------------>CBF--------->ARR14(2)   tccccttttctggagattggtgtggcggagaactgattagcgaacgagacgaaaagaatttatataccacaatgtttctagggtttcctccttttcgagc  609500                                                                          <---------ICU4                                                                          --------->ATHB51           --------->AHL20(2)               <---------YAB1                <--------ATHB1            -         <----------DOF2                 <---------ATHB51                 <---------AHL20(2)      ---  <------------CBF                       <---------ATHB12                 --------->AHL20(2) -------- ->HSFB2a(2)               <----------DOF2--------->YAB1    <---------ATHB12        <---------TOE2(3) --HSFB2a(2)     <---------AHL20(2)  ------------>CBF  <---------TOE2(3) <---------ATHB51    -------- ------->GT1    --------->AHL20(2)  --------->ANAC46  <-----------GT1    --------->ICU4    ----------   agtatattgggctttaaatttaaaatgggcttttctaaacccaattataagtcttttaacgaatgattctatgtaataatttcatcaaggttgaaaagct  609600                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                           ---------->DOF2                                                                   --------->ANAC58      <---------AHL20(2)                           ------------------------>ANAC81     --------->AHL20(2)                           xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ------>MYB46(1)                               xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   ------>MYB83                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            <----- -------->ANAC46<---------TOE1(3)  <---------AtMYB61               --------->ANAC58            <----- ------>REM1(1) <---------TOE2(3)<----------DOF2xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         --------- ->ANAC58 <---------AHL20(2) --------->ANAC58   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <-------- ->ANAC58 --------->AHL20(2) --------->ANAC58  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         <---------ICU4 >DOF2--------->AHL20(2)     --------->ANAC46  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <----------DOF2   acaccaaatttataaattgaggtttagaaacacggctttggtttacaaaaaaaaaaaaaaaaaaaaaaaacgcattggaaagcatgctttaaaaattatg  609700                                              <---------AHL20(1)                                              --------->ARR11(3)       --------->AHL20(2)                     --------->AHL20(1)                             <------- <---------ANAC46                       <---------YAB1                                      --------- ----YAB1      ------->GAMYB     --------->AHL20(2)                                    <----------DOF2 ----TOE2(3)  <------------AtMYB77   <---------AHL20(2)                              <---------YAB1 >ICU4 <---------AHL20(2)        <---------AHL20(2)            ------->TEIL        <---------CCA1(2) -ATHB51    <-----------GT1     --------->AHL20(2)           <<<<<<<<<EIN3    <---------CCA1(2)   gttctgtatatatataactgtcgattagagaaaaaaaaatttatgaaaaatattgtataccaatgtatatatacagatgtttatcttatctttataatgt  609800                                                           --------->ANAC55(2)                                                           <---------ANAC46                                                           <---------ANAC55(2)                                                           --------->bZIP60(1)                                                           --------->TGA2(1)                                                           <---------TGA2(1)                                                           <---------bZIP60(1)                                                          ----------->STF1                                                         <---------TGA2(2)                                                --------->AHL20(1)                                                <---------AHL20(1)                      ---------->DOF2        --------->YAB1                         <---------AHL20(2)  ------->TEIL      <----------DOF2   ------->GAMYB                        ----------->GT1 ----------->HVH21            --------->TOE2(3) --TOE2(3)    ----------->GT1       --------->ICU4      ----------->TGA1         <---------CCA1(2) <- >YAB1 <---------ATHB12             <---------YAB1   <---------AHL20(2)       --------->TOE2(3) <----   ttcaacccaatgagaattgtatatatgtttgtattgtcttaattgttatatatattatatgacgtaatgtatatgaacaacgtttatctttaaagactct  609900         --------->ANAC55(2)       <-----------GT1     <-----------GT1  <---------YAB1 <---------AHL20(1)             <---------AHL20(2) <---------AHL20(2) --------->ANAC58  <---------ANAC58       ----------->GT1                 -------- --------YAB1       --------->ANAC58  <---------ANAC46      --------->DAG2 <---------At4g35610   ---- -----YAB1          --------->ANAC46  <---------ANAC58     ---------->DOF2 --------->At4g35610   <---   tattatttttcacgttttattcaaggaagtttgtttatttgcttgcaaaaaaaaaaaaaaaaaaagtatatcagttttgctgaaatgtttttaaaaaata  610000  Previous    Next  AGI:  At1g02780.1    Description:  EMB2386 (EMBRYO DEFECTIVE 2386); structural constituent of ribosome. Identical to 60S ribosomal protein L19-1 (RPL19A) [Arabidopsis Thaliana] (GB:Q9SRX2); similar to 60S ribosomal protein L19 (RPL19C) [Arabidopsis thaliana] (TAIR:AT4G02230.1); similar to unknown [Populus trichocarpa] (GB:ABK93587.1); contains InterPro domain Ribosomal protein L19/L19e; (InterPro:IPR000196); contains InterPro domain Ribosomal protein L19/L19e, domain 1; (InterPro:IPR015972); contains InterPro domain Ribosomal protein L19/L19e, domain 3; (InterPro:IPR015974) Range:  from: 607808    to: 609465    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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