Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        ------>MYB46(1)                ----------->GT1             <----------DOF2    ---------->DOF2                     -- ---ICU4    --------->ANAC46               <---------DAG2  ------>NtERF2                           -- -->ATHB12  --------->ANAC58        <-----------ARR10 ------>MYB83    --------->ICU4           ------ --ATHB12   --------->ANAC58      ------->TEIL        -------->P      <---------ATHB12    ---------->DOF2   ttcaaaccgattagaagccagtaactatattggatgaagctctaaccttttgttccaaccctgccaaaagaaatcatttacatcttcaaaactaaagata  601600                                                                           --------->YAB1                                                                    <-----------GT1                          <-----------GT1                       <---------ARR11(3)  --------->AHL20(2)        --------->At4g35610            --------->ARR14(2)       <---------AHL20(1)  <---------AHL20(2) ------->ANAC58     --------->ATHB12   <-----------ARR10        --------->AHL20(1)<----------DOF2 ------->ANAC58    --------->ICU4      <---------ARR11(3)--------->ZAT18   --------->ATHB12         - --->CCA1(2) ---------->DOF2           <---------ARR14(2)<---------ZAT18  <---------ATHB12    <------   gaagcaaaatagctcaaaagaatgattttaaacatatacagtatctacttacaatgtaatgcacaaaatatttccattcattgtctttaaattcaacttt  601700                --------->YAB1            <---------YAB1   --------->TOE1(2)   --------->TOE2(2)  ----------->RAV1(2)                                --------->YAB1 ------->TEIL  <---------YAB1                     --------->DAG2 --------->GLK1(2)          ---------->DOF2      ---------->DOF2 -------->ARR11(3)<---------YAB1       <------ZmHOX2a(2)            --------->ZAT14 ----DOF2   <---------AHL20(2)        <-----------HVH21   --------->At4g35610   aagaacctgagaatattattataaaaaaaaaaaaggaaacgatcagagacataaagcataagcagagaagaacactctaattcaagaatacagagagtgt  601800                                                                               <-----------RAV1(2)                             <---------At5g28300                            <------ZmHOX2a(1)                           <---------ATHB12                             <------NtERF2                      --------->ANAC46                                 <------NtERF2                      --------->ANAC58                                 --------->LBD16        --------->TOE2(3)  --------->MYB46(3)                         <---------LBD16   --------->At4g35610        --------->TOE1(3)--------->WOX13(1)                          <---------LBD16 <---------At4g35610      -------->P    ---------->DOF2                                  <---------ANAC46--------->At4g35610   <---------MYB52(2) --------->ANAC58                            --------->ALFIN1 <--------P <-----------GT1<---------ANAC46                        ------>ZmHOX2a(1) --------->ALFIN1          <   atttcactaaccttggcttcgtagaagcaatcactgtgtttggctaaaactctctctccttcttcgaagtggccgggaggagcaggtagcagaagaagag  601900                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               ------                                                                                       ------>ZmHOX2a(2)                                                                                      <------ZmHOX2a(2)                                                                                     --------->AGP1--                                                                --------->At4g35610  --------->ARR14(2)          <-----------HVH21                            <---------ANAC46              <---------ARR14(2)          <-----------TGA1                           <---------ANAC58              ----------->ARR10<         --------->ANAC46                            <---------TGA1a            <-------GAMYB<------- --------->ARR14(2)      <------MYB83                --------->TGA1a           <---------MYB46(3)<--- <---------ARR14(2)      <------MYB46(1)             <---------ANAC46          --------->MYB55(2)<--- <---------ARR11(1)     <---------AtMYB61            ===================================MYC_MYB<----- <---------ARR11(3)    <--------P   --------->YAB1   <---------ANAC58          --------->MYB111(2)--- --------->ARR11(3)    ========================================MYC_MYB      <---------MYB46(3) <----- <-----------ARR10   --------->ALFIN1                <---------O2       --------->ATHB12 <-----------HVH21 ---------CCA1(2)    <-----------RAV1(1)           <-----------HVH21   <---------ATHB12<-------TEIL<-   gcaaatcttctccgtcacaatcggtgttggtctctgtatcagaaccagagtcccgtcgtgtgtctccgatgaaatcatcggttgttagatccgtctcggc  602000    <---------MYB52(1)   <----------DOF2   <-----------HVH21  <---------ANAC46 <------NtERF2 ---------DEAR4(2) ----->NtERF2 ---------ORA47(2) ---------RAP2.3(1) ---------ERF1 ---------ATERF1(1) --------RAP2.3(3) --------ANAC46 --------DEAR3(1) -------ABI4(1) ----NtERF2 ------>ATERF1(1) ------>DEAR4(2) ------>RAP2.3(1) ------>At4g35610 -------At4g35610 ------ATERF1(1) ------ERF1 -->NtERF2<---------ANAC58 ------RAP2.3(1) ------RAP2.6(1) ------DEAR4(2) -----RRTF1(3) -----ATERF1(2) ---->DEAR3(1) ---->ATERF1(2) -----DEAR3(1) -----RRTF1(2) -----RAP2.3(3)                                                                             --------- -----RAP2.3(2)                                                                             --------- -----RAP2.6(2)                                                                             <-------- --->ATERF1(1)                                                                              ========= ------->DEAR3(1)                                                               --------->ANAC58 ---------RRTF1(1)                                                              --------->ANAC46 --DEAR3(1)                                   ---------->DOF2                  <---------LBD16 ------RRTF1(1)                 <------ZmHOX2a(1)    --------->At4g35610      <---------ALFIN1<------ ------ORA47(2)              <------ZmHOX2a(1)<---------ZAT14         ---------->ID1        --------- ----ABI4(1)            --------->DAG2 ---------->DOF2              <---------ANAC58        <-------- ------>DREB2C(1)       ------------------------>ANAC81             <---------ANAC58     ----------->HVH21 -NtERF2  <---------ANAC58 ------------------------>ANAC81       <----------DOF2--------->ANAC58    < --------RAP2.3(2)     ---------->DOF2*TSS ----------->GT1       ====================================   ggcggcgttagggcttcccatctcaaaaagaggaggagaagaaaagagtaaagagagcttaagagccctttcgtcttcttccacggctcgtctcacgtcg  602100                                                                                         <----------TaMYB80 ----------->RAV1(1)                                                                     <---------HSFB2a(1) >ANAC46                                                                     --------->LBD16 >TGA1a                                                                     --------->LBD16 -O2  <---------TOE2(3)                                                     <---------HSFB2a(2) ==============bZIP_DOF                                                     --------->HSFB2a(2) ---------------WRI1                          ------->TEIL                 <---------ANAC46       --- >O2---------->DOF2                     <---------MYB46(3)                 --------->HSFB2a(2) ------ -TGA1a----------->GT1             ---------->DOF2                         <---------HSFB2a(2)<------ ----------ID1                  --------->ANAC58                           <---------LBD16 <--------- =bZIP_DOF   <----------ID1     --------->ANAC58     --------->ANAC46     <---------LBD16--------->HSFB2a(1)   aagcgacaaaggtaaatgacaaaaaaaaaaactcactcaaagttgttgaatctcaacgcgattttgtctgaaaatttccgggaaaattgggattttccgt  602200                                                                              <---------ICU4                                                                            <---------ARR14(3)                                                                   --------->AHL20(2)                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)     --------->GLK1(2)                                        <---------AHL20(2)        --------->ANAC58    <---------GLK1(2)                                         --------->AHL20(2)        --------->ANAC58 --------->YAB1                                       --------->ANAC58      --------->ARR14(3) ------>WOX13(1)                                      --------->ANAC46      <---------ARR11(3) --->LBD16                                          ---------->DOF2<---------ICU4     ---------->DOF2 ---ANAC46           <---------GLK1(2)  <---------YAB1--------->ANAC58      --------->GLK1(2)   ----- --GT1       <---------GLK1(2)     <----------DOF2 <---------REM1(2)        --------->ARR11(3)  <----   ctatcagaatctaaaaattctcagattttaacatgggcttttattattaggcctacaagcccatttaaataatttcaaaatcttgacttcaagcccattt  602300            <---------ICU4          --------->GLK1(2)                                    --------->AHL20(2)                ----          <---------ARR14(3)               <-----------HVH21<---------ICU4                      -----          --------->ARR14(3)      <---------AHL20(2)       --------->ICU4               --------->At5g28300          --------->ARR11(3)  --------->AHL20(2)         --------->YAB1                ----------->GT1          <---------ARR11(3)  <---------AHL20(2)   <----------DOF2                    --------->ZAT6 ---->AHL20(2)      ---------->DOF2       --------->ANAC46 <---------YAB1           --------->MYB52(1) -----AHL20(2)    <----------DOF2 --------->AHL20(2)    <---------ZAT6              --------->YAB1   atatcatttcaaaatcttgactttaagcccatttatataatttcaagtcaggcctttactgataattaacttggggagcaatgcaataacagtaacatcc  602400                                                                                       --------->ANAC46         <------ZmHOX2a(1)                                               <---------ZAT18        <----------ID1                                                   --------->ZAT14     ---------->DOF2          <---------At4g35610                        <---------ZAT14      <------  --------->ANAC46            <---------ZAT2                   <---------YAB1        ------>MYB46(1)  --------->ANAC58            --------->At4g35610<---------ZAT14         --------->ZAT18--------->LBD16  --------->ANAC58            --------->ZAT2     --------->ZAT14--------->YAB1       ------>MYB83*TSS -->ZmHOX2a(1)         --------->LBD16---------->DOF2      ----------->GT1         <---------ALFIN1 ---->TOE2(3)        ----------->RAV1(2)         ------------>CBF  --------->YAB1 --------->MYB46(3)   ttacaagaaaaggacaaaaacacccctgagttagctgagaaaaaggctcagtgcaatgtaagggtataatagtagttcactcttaccacccgaagtattc  602500  Previous    Next  AGI:  At1g02740.1    Description:  chromatin binding. similar to MRG family protein [Arabidopsis thaliana] (TAIR:AT4G37280.1); similar to MRG family protein, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA94215.2); contains InterPro domain Tudor-like, plant (InterPro:IPR014002); contains InterPro domain Histone H4 acetyltransferase, NuA4 complex, Eaf3/MRG15 subunit (InterPro:IPR017398); contains InterPro domain MRG; (InterPro:IPR008676); contains InterPro domain Chromo domain; (InterPro:IPR000953) Range:  from: 599416    to: 602038    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02750.1    Description:  zinc ion binding. Identical to Protein DEHYDRATION-INDUCED 19 homolog 2 (DI19-2) [Arabidopsis Thaliana] (GB:Q8GWK1); similar to drought-responsive family protein [Arabidopsis thaliana] (TAIR:AT4G02200.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 602497    to: 604292    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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