Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          --------->ZAT14                                                                                        --------->ZAT18                    ------->MYC3                                            <---------ALFIN1                    <-------MYC3                                         <-----------GT1<---------ZAT18         <---------DAG2     ---------->DOF2                          <----------DOF2    <-------TEIL         <----------DOF2<---------TOE2(3)          --------->ANAC46  <---------DAG2     <---------ZAT14 --------->AtLEC2<---------ALFIN1      ---------->DOF2            <-----------GT1  ---------->DOF2   gcgatgcaaaactttttgcacacgttgagataaagaagactaaatgcgaacacacataagaattcttttaactttttcccactctcaaagtacacttgga  556700                                                                          <-----------GT1                                                                         <-----------GT1                                                                        <---------YAB1                                                                     <---------YAB1                                                                     --------->ICU4                                                                   <---------ICU4                                                                  <---------YAB1                                                                  --------->ICU4                  ---                --------->TOE2(3)                            <---------At4g35610                -----             <---------CCA1(2)  ------>ZmHOX2a(2)            --------->At4g35610           ----------           <---------ANAC58   --------->ARR11(3)           <---------RAP2.6(2)           --------->YAB1           <---------ANAC58   <---------ARR11(3)           <---------DEAR3(1)          --------------   cgcagacatttgggcttatcttattctgttctgatcttatctactacgttggagttttggttcggctgattattattaacatccacaaaaatcaaaagaa  556800                                 ------>ZmHOX2a(1)                                                  <                             <---------ARR14(2)                                                 <----                             <---------ARR11(3)    --------->ARR14(2)                        --------                       ----------->GT1       <---------HSFB2a(2)                  ----------->TBP   <                       <---------DEAR3(2)    --------->HSFB2a(2)                --------------->AGL15                      <---------DEAR3(1)  <-----------GT1                       <---------------AGL15                      --------->ETT(1) --------->ATHB51                --------->AHL20(2)    <-------                     --------->RAP2.6(3) <---------YAB1            <---------AHL20(2)        <-------                     <---------ORA47(1)<--------HAHB4              --------->AHL20(2)       --------- -------->GT1      <---------MYB46(3)  <---------ICU4    --------->WRKY12      <----------ID1-------- ----->DOF2  --------->YAB1  --------->ARR14(2)    <---------ARR14(2)  --------->YAB1       --------- >DOF2  ------------>CBF<------NtERF2 --------->ICU4     --------->WRKY38(1)   ----------------->AGL2 ---------->ANAC81<---------AtMYB61   <---------YAB1 <-------TEIL --------->AHL20(2)   ----------->GT1   aagaaaaaaaaacaatattgatggtcggcaaaatcctcccattattactagaaaatacgttgacaaaaattaataaaaaatgctacaaatagaaatatct  556900                                                                 <---------MYB52(1)          --------->AHL20(2)                                    <-------GAMYB ---------ANAC58                                               <------MYB83 ------DOF2                                                    ----------->GT1 ->ARR11(3)                                                    <------MYB46(1) ---------ANAC58        <---------------------WRI1            --------->MYB59 --ARR11(3)           <------MYB83                     --------->LBD16           <---------YAB1 --AHL20(1)           <------MYB46(1)           --------->AHL20(2)              --------->AHL20(2) >CCA1(1) <---------AHL20(2)                    <---------AHL20(2)    <---------ICU4<-----------GT1 ->AHL20(1)          <---------TOE1(2)  ------------>CBF--------->LBD16 <---------ATHB12 >RVE1(1)--------->AHL20(2)        ---------->DOF2    <---------HSFB2a(2)    --------->YAB1   tttcgtctgaatttaaaaatttgtaggttgaagtaaacaaagaacaatttttaaatcccgaagttcggttactaatcactaatattataccattcgattt  557000                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                       --------->AHL20(2)                                            ------------>CBF                 --------->HSFB2a(2)                                               ------>ZmHOX2a(1)                 <---------HSFB2a(2)                                         <-----------ARR10               <---------ANAC46                                              <---------ARR11(3)               <---------REM1(1)           <---------ARR14(2)                --------->ARR11(3)               ----------->GT1             --------->ARR14(2)               --------->CCA1(1)             <-------GAMYB   ---------->DOF2                          --------->ANAC58      ---------            <-----------RAV1(1)   --------->CCA1(2)     --------->AtMYB61   --------->RVE1(1)        <---------ANAC46    --------->AHL20(2)  ---------->DOF2       --------->ANAC58      <--------   tgaactacttatgtgtgttgtagaaaaaaataaaagataagagagtatttgaaagagaccattccacttgctaagcaaatatctcctctcaatgggccct  557100                                                       <--------HAHB4                                                 <---------MYB52(1)                                              --------->ATERF1(1)                                              --------->DEAR4(2)                                              <------NtERF2                                              --------->RAP2.3(1)                                             ------>NtERF2                                             <---------RAP2.3(1)                                             <---------ATERF1(1)                                             --------->ABI4(2)                                            --------->DEAR3(1)                                           --------->RAP2.3(1)                                           --------->ATERF1(1)                                           <---------ABI4(2)                                           <------NtERF2                                          <---------RRTF1(1)                                          <---------DEAR4(2)                                          ------>NtERF2<---------ICU4                                          <---------RAP2.6(1)                                          <---------ERF1                                         <---------DEAR3(1)                                         <---------RAP2.3(3)                                         <---------RRTF1(3)                                         <---------RAP2.3(2)                                        --------->RAP2.6(3)                                       --------->MYB52(1)<---------YAB1                                      --------->ANAC46--------->ICU4                <---------MYB52(1) >PCF2                       --------->ZAT18<---------DEAR3(1)                    <---------ANAC46 -PCF5                    <---------ANAC46<---------ATERF1(1)         <---------ALFIN1 >PCF5                    <---------ANAC58<---------RAP2.3(1)    --------->GLK1(2)<---------ANAC58 -ZAT18       <---------ANAC58        ----------->HVH21--------->ATHB51 <---------ALFIN1 >ZAT18       <---------ANAC58      --------->ZAT6    <---------YAB1 <---------REM1(2) -PCF2    ---------->DOF2 <---------ANAC58<---------ORA47(2)   <------ZmHOX2a(1)  <---------ANAC58<--   ctcactcggtccaaaagcttgcaatagtgcgtgggctaacacgacggcgccgtttcattattacaggaatctacacacttcttgccgtttgtacagacaa  557200                   <---------ANAC58                   <---------ANAC58                  <---------ZAT2              <---------ARR14(2)              --------->ANAC58                --------->ARR11(3)              --------->ANAC46                <---------ARR11(3)              --------->ANAC58               --------->GLK1(1)            <---------ALFIN1          <---------ANAC46           <---------REM1(2)          <---------ANAC58       --------->ARR14(2)         <---------ANAC58 --------->ANAC58                     <-----------GT1       --------->GLK1(2)          <---------ANAC58 --------->ANAC58                <-----------GT1       <---------ARR14(2)   --------->AHL20(2)--------->ARR14(2)           ---------->ID1       <-----------ARR10 <---------RAP2.6(3)<---------KAN4(2)          <----------DOF2 --------->ZAT14      <---------GLK1(2)---------->ID1 <---------ANAC58         <<<<<<<<<TBF1   <----------DOF2   <--- -------ARR11(3)  --------->ZAT2 <---------ICU4    --------->ANAC46  ------>ZmHOX2a(1)<----------DOF2   taacttcagaatctacacgctgcttgccgttttaatacttgcttagaatatccacacaagttttcttcttcctctttgtctcttttctctttactcgtcg  557300                                          <---------TOE1(2)                                          <XXXXXXXXXXXXXXXXXXXMIR3434*                                          <---------TOE2(2)                              --------->CCA1(2)         --------->MYB52(1)   <---------ANAC58                                     <------ZmHOX2a(1)         ---------->DOF2      <---------ANAC58                                  <-----------RAV1(2)      --------->At4g35610     <---------ANAC46<-------TEIL                  ----------->HVH21      -- --------->HSFB2a(2)         --------->ATHB12<--------P                 <---------ANAC58<---------ARR14(2) <---------HSFB2a(2)<---------GLK1(2)  <-----------GT1                  <---------ANAC58--------->ARR14(2) ------CCA1(2)    --------->ICU4 <---------MYB46(3)                <---------MYB46(3) ----------->ARR10   tctctcgaagctaaagggtattgattcttgttgagtggttttcacaggttgatgctctggtctacttagtggatgcttatgaccaggagagatttgcaga  557400                                                                                              -------                                                                                              <------                                                                                              -------                                     ------>ZmHOX2a(1)                                       ------->TEIL                                    --------->TOE1(3)                                   <---------At4g35610                                 --------->GLK1(2)                                      --------->At4g35610                                 <---------ARR14(2)                                    --------->ANAC46    --------->DAG2   --------->ZAT14--------->TOE2(3)   <---------------AGL15         --------->SPL7   ---------->DOF2------->TEIL   --------->ARR14(2)     ------>ZmHOX2a(1)           <---------SPL7 ------->YAB1   <---------ZAT18  ------->TEIL <-----------HVH21  <------ZmHOX2a(1) <---------DAG2   <   atcaaaaaaggagcttgatgcacttctctcagacgaatccttagccactgtcccattcctcatcttaggaaacaaaatcgacataccttacgctgcatct  557500     --------->ZAT2 -->At4g35610                                             ------->TEIL ---At4g35610                                        ----------->GT1 ---->RAV1(2)                                ---------->DOF2  --------->MYB52(1)           --------->ALFIN1 ------ZmHOX2a(1)                  <-----------GT1 ---------->DOF2                --------->ATHB12  -   gaggacgagcttcgattccatcttggcctctccaatttcacaactggtaaaggcaaagtgaatctaactgattcgaatgtgagaccattggaggtgttta  557600  Previous    Next  AGI:  At1g02620.1    Description:  GTP-binding protein (SAR1A). similar to ASAR1 (Arabidopsis thaliana secretion-associated RAS super family 2), GTP binding [Arabidopsis thaliana] (TAIR:AT4G02080.1); similar to GTP-binding protein SAR1A (GB:O04266); contains InterPro domain ARF/SAR superfamily; (InterPro:IPR006689); contains InterPro domain GTP-binding protein SAR1; (InterPro:IPR006687) Range:  from: 557092    to: 557986    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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