Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->TOE2(3)                                    --------->ANAC55(2)                                    <---------ANAC55(1)                                    <---------ANAC58                                    ----------->GT1                                    <---------ANAC58                                    <---------ANAC46                                          -------                                    <---------ANAC55(2)                              <---------YAB1                               --------->WOX13(1)                                   --------->AHL20(2)                  XXXXXXXXXXXXXXXXXXXX>MIR837-3P                 <------ZmHOX2a(1) --------->YAB1   -   acagattaaacttagaagaaacaaaaaaaaaaccaattacgtaaattcaaaaccaattcaaaatttaggagaagatgaaaacaaattataatctaacatc  555500                                             --------->ATHB12                                             --------->ATHB51       <---------ALFIN1                      -------->ATHB1  --------->ANAC58                          <---------YAB1  --------->ANAC58           --------->AHL20(2)  --------->YAB1 --------->DAG2            ----------->GT1  <---------ATHB51                      <-----------GT1 -->TOE2(3)              ---------->DOF2    <---------AHL20(2)      <---------LBD16               <-- --------->DOF2    ---------->DOF2          --------->ICU4         ----------->RAV1(2)        <------   aaaaaagcaaaaccccttaaaaaaagagaaagtaaatgttagagaaattattgataaactagaaatcaaacctggagacaaatttcacaaattgtgtttc  555600                                                   ------->GAMYB                                                  --------->ANAC58                                                  --------->ANAC58                                                  --------->ANAC46                                               --------->TOE1(2)        --------->ANAC58             --------->ZAT18             --------->YAB1        --------->ANAC58             <---------ZAT18            <---------ATHB12        --------->ANAC46           <---------At4g35610        --------->WOX13(1)                    < --------DOF2                      --------->At4g35610  --------->AtMYB61                          -- -----GT1                      <-----------HVH21--------->MYB52(1)                             ------   ctttctcatcacaccatcgttgtatgcaatctctgtgagcgaactaaatccaacgaaaccaaaacaatcaatatcggttttcaaaagaatcaaacaaaaa  555700                                                                                      <---------GLK1(2)                                  --------->LBD16                   --------->At4g35610                                ----------------->AGL1              <---------ZAT2    --------->ARR14(2)                            <---------MYB46(3)                      <---------At4g35610 ---------AHL20(2)    --------->TOE2(3)                      --------->At4g35610----------->HVH21 ------->AHL20(2)   <---------At5g28300           --------->At4g35610<---------GLK1(2)<---------ARR14(2) --->AHL20(2)      <-----------GT1------>ZmHOX2a(1)    ---------->DOF2    <<<<<<<<<TBF1--------->GLK1(2)   aataaatctagaattcgatatttaccttgatggttcctgaacaagaacaaggagcttcaaagtagctctcagcttcttcttcgtgacagattctacagcg  555800                                                                                      --------->ZAT18                                                                                 ---------->DOF2                                                                               --------->ANAC58     <                                                                          ----------->HVH21   <------                                                             <----------DOF2   --------->ANAC58     <                                           <---------At4g35610          --------->At4g35610  --------        >>>>>>>>>>GATA-1                 --------->REM1(1)------>NtERF2 <---------At4g35610  <-------   attaaaactcgatttcaaatatgtttcatctatgaacaaaactacatctcccatcgtctctgcctttgaattttagatgacaagaaagcgctccaagctc  555900 ----------DOF2                     <---------WRKY18(1) ---ARR11(3)               <---------ANAC58 ---------DAG2             <---------ANAC58                                          <---------ATHB12 ->ZAT2              <---------MYB52(1)                <---------MYB52(1)     <----------ID1      --- --ZAT2 ---------->DOF2  <-----------GT1    --------->AHL20(2)             ---------->DOF2--------->YAB1   tgctttttgcaaaagtatgctctgttttttcttgctcttgaccaaaaaaaatgctctgttttttgtttttctctgaagaaagaacaaatgaatgagaaga  556000                                                                                                    <                                                                                                  <--                                                                                                 ----                                                                                               ------                                                                                               <-----                                                                                               <-----                 ----------->GT1                                                              -------                --------->DAG2                                                                <------          --------->TOE1(3)                                                                   <------          --------->TOE2(3)                                 ------>ZmHOX2a(1)               ---------          --------------->AGL15                            --------->ANAC55(2)          --------->AHL20(1)          <----------DOF2 <-----------GT1                  --------->TOE2(3)            <---------AHL20(1)          <---------------AGL15                     <----------DOF2               ----------->GT1<--- ------->DOF2 ---------->DOF2          <----------DOF2  ---------->ID1 <---------AHL20(2)  <---------AHL20(2)   gaaagagttcaactttaaaaggtagaatttacaaggttaccctttattctgttcctttgttccttaatttgttttaattctcttcggtaatatataatca  556100   <-----------GT1 ---------YAB1 -------ICU4                                         >>>>>>>>>>WRKY40 ----->ICU4                                          <---------WRKY18(1) --->YAB1           <---------At4g35610              >>>>>>>>>>WRKY62 ---HAHB4           --------->At4g35610              >>>>>>>>>>WRKY18               <---------AtMYB61 ----ICU4     <---------TOE2(3)                     --------->WRKY45            <---------ZAT14 -->ICU4     <---------ICU4  ------------>CBF       --------->WRKY12            <---------At4g35610 ---YAB1  --------->YAB1    <-----------GT1         --------->WRKY38(1)         --------->ZAT14 ---ATHB12<---------ICU4 --------->YAB1           <----------DOF2  <-----------GT1<---------ANAC46<-- >YAB1 --------->YAB1 ----------->GT1  ----------->RAV1(1)------>MYB83<----------DOF2<---------MYB46(3) ------YAB1 --------->ICU4  --------->YAB1<------------CBF------>MYB46(1)  <----------DOF2--------->ATHB12   ttattttactaataataatgtaagctgtaataacaatttcccaacattgaagctttgaccaaatgtttttgacttttctttgtgctgtggtttgatttgg  556200                                                                                      <-------GAMYB                                                                                      --------->At4g35610                                                                                     <---------MYB46(3)                                                                                     --------->MYB46(2)                                                                                     --------->MYB52(2)                                                                                   <---------MYB52(1)                                                                           --------->TOE2(3)                                                                          <---------YAB1                                                                         --------->ARR11(3)                                   <-----------GT1  --------->AHL20(2)   <---------ARR11(3)            <---------YAB1        <---------YAB1<----------DOF2 --------->GLK1(1)  <--------P     --- -------MYB46(3)         <----------DOF2     <-----------GT1    <---------GLK1(1)<---------MYB46(3)   ctgttcagataaatactatagttgtcactttgaattttgactgtttattacttttaaaatacttggatttcgaattatcttagtggttagttgaacaacg  556300                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                 --------->MYB52(1)                               ---                                         --------->At4g35610        --------->DAG2       <------ZmHOX2a(2)                                         <---------ZAT2--------->GLK1(1)                <---------ARR11(3)                                    <---------YAB1    --------->ARR14(2)            --------->ANAC55(2)                      <-----------GT1 ---------->DOF2 <---------ARR14(2)    <---------AtLEC2     <--- ---->TEIL---------->DOF2     --------->ARR11(3)--------->MYB46(3) ---------->DOF2  <---------ANAC55(2)   tatttagaaacacaaagactgattttacttaagaaattgtgaaagctggaacaacggatatatacaaaaaaaagttttgtatggttacgagatcacacag  556400  Previous    Next  AGI:  At1g02610.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to PIT1 (PITCHOUN 1), protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G02075.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40102.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 553181    to: 555854    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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