Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <xxxxxxxxxxxxxxxxsmallRNA(i)                     --------->YAB1                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  xxxxxxxxxxxxxxxxxx>smallRNA(le3)                  <xxxxxxxxxxxxxxxxsmallRNA(s)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                  <xxxxxxxxxxxxxxxxsmallRNA(i)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                 --------->MYB46(3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                <------NtERF2               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------ZAT6        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------AHL20(2)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxx>smallRNA(i)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  xxxxxxxxxxxxxxxx>smallRNA(i)      xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ARR11(3)<xxxxxxxxxxxxxxxxsmallRNA(i)                    ----------->GT1     --------->GLK1(2)--------->TOE2(3)--------->MYB52(1)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->AHL20(2) ----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------->TEIL  <---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     <-- ---->ANAC58 xxxxxxxxxxxxxxxx>smallRNA(s)  <------ZmHOX2a(1) --------->RAP2.6(3)           <---------YAB1 ---->ANAC58 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <-----------GT1 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   gcattaaaatctagtggcagccatcgtaaataagtctcaactacaggatttatttcacaaaatgactgcaaaaatgtatatatagatactattttgaata  541000                                                                                                   --                                                                                                   <-                                    --------->ANAC46                                               <-                                    --------->ANAC58                                             ----                                    --------->ANAC58                                             ----                                  ---------->DOF2                                                <---                                <---------AHL20(2)                                               <---                            --------->ATHB51                                                   ------             ------>MYB46(1)--------->AHL20(2)                                                 <-----             -------->P    --------->ICU4                                                      ------        <-----------GT1    <---------YAB1                                                    --------     --------->YAB1        <---------MYB52(1)               <---------AHL20(1)             <---------     <---------ICU4     --------->MYB46(3)        --------->AHL20(2)                      --------->WOX13(1)    <---------YAB1      --------->ICU4 ----------->RAV1(1)  --------->ARR11(3)        <------MYB46(1)    --------->ICU4    <-----------GT1 <----------ID1   --------->AHL20(2)             <------MYB83--- ---------GT1------>MYB83<---------ICU4--------->RAP2.6(2)  --------->AHL20(1)     <------ZmHOX2a(1)<   taacttattattaccaacatgtagtaaccattatttaaaagccacaaaaaaaaaaaatcaaatattttgttttttaaaaaaacgaggatggtccatcagc  541100 ------->ZAT2 -----NtERF2 --------ZAT2                                                       <---------AHL20(2) ----->DEAR3(1)                                                     <---------YAB1 ----->ATERF1(2)                                                    --------->AHL20(2) ------DEAR3(1)                                                    --------->AHL20(2) ------ATERF1(2)                                                   <---------AHL20(2) --->ZAT2                                              --------->GLK1(2)--------->AHL20(2) ----At4g35610                       <------MYB83      <---------ARR14(2) --->At4g35610                       <------MYB46(1)   --------->ARR11(3)   --------->AHL20(2) ->MYB46(3)               --------->YAB1               --------->ARR14(2)<---------AHL20(2) --HVH21              <---------AHL20(2)              --------->RVE1(1) <---------AHL20(2)      ----- --->NtERF2          --------->AHL20(2)      --------->TOE2(3)    --------->YAB1              <------ ---------DEAR3(1)   <---------AHL20(2)   <-----------GT1    ------------>CBF        ----------->GT1   cggctgtgttcatcgatgagcaaataaatgaaaattagtgggttttacattagaaaaaatctggacaattttaattaaatatatgtatagtagattaaga  541200                                                <--------P                                               <-------GAMYB                                              <---------MYB46(3)                                             --------->ALFIN1                                           ========================================bZIP_DOF            =========================================bZIP_DOF             ----------->TBP         --------->YAB1                    =============================bZIP_DOF   <---------TOE2(3)                       ============MYC_MYB          <----------DOF2 --------->MYB52(1) --------->TOE2(3)      <---------O2            ---------->DOF2       <-----------GT1 ---------->DOF2   --------->HSFB2a(1)     <---------TGA1a      --------->TOE2(3)   <----------DOF2 ---->AHL20(2)     <---------HSFB2a(1)     --------->O2      <----------DOF2   <-------TEIL ---TOE2(3) ---------->DOF2               <-----------------------TaNAC69(2)  <-----------GT1   -----   aaataaaggaataagaaaggaacctttgtagctagacgaccatagacgtggttgccaaacacactttcttaaagctttatatacatctttcttacttcct  541300                    ------->GAMYB                 ----------->RAV1(1)                 --------->MYB52(1)              --------->ANAC58                                            <---------TOE2(3)              --------->ANAC46                                            <---------YAB1            ---------->DOF2                                             --------->YAB1       <---------YAB1  <-----------ARR10                             --------->WOX13(1)       --------------->AGL15               <<<<<<<<<TBF1           ------------>CBF       <---------------AGL15            <<<<<<<<<TBF1          <----------DOF2 ->ZmHOX2a(1) --------->ANAC58      <-----------GT1   <---------ALFIN1 <---------ATHB12   ctgtttcttctcattcaagcaacagtctcttcccattttttcttcttcttctccctctacctcttctttgccaattaagatggaacatgaagaaacacag  541400                                                                                                <----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                 <-----------HVH21                                                              -----             --------->At4g35610                                                                -----             --------->ZAT2                      <---------MYB52(1)                         <--------             <---------ZAT2                 ------>ZmHOX2a(2)                              ==========             <---------At4g35610           --------->GLK1(1)                               <---------             ----------->RAV1(2)          <---------ARR11(3)                    =====================           <-----------RAV1(2)            --------->ARR11(3)                    <----------DOF2 -----       <------ZmHOX2a(1)                <---------ATHB12              ---------->ID1 ------>ZmHOX2a(1)   aagaagacaggaatcagctggtcactggttcgaccatttcaaatgatctccattagccttcttagtcttcttgtccctctctctttcctcttcctttcac  541500       --------->ARR14(2)       <---------ARR14(2) -----TGA1a ---->TGA1a                           --------->LBD16 ---->O2                        <-----------HVH21 -----O2            --------->At4g35610       <-----------GT1 ---->ANAC46        --------->ZAT2  <---------LBD16 ---->ANAC58        <---------At4g35610    --------->ARR14(2) ---->ANAC58 <---------ALFIN1<---------At5g28300                                  --------->ANAC46 ---HVH21  ------>ZmHOX2a(1)<---------WRKY38(1)                           --------->GLK1(2) =====bZIP_DOF      <---------ZAT2<---------ARR14(2)                     <---------GLK1(2)          < -DOF2<---------MYB52(1)  <-----------HVH21<---------ARR14(2)         --------->ETT(1)             <- =====bZIP_DOF------>ZmHOX2a(1)--------->DEAR3(1)                --------->At4g35610        --------- ---->ANAC55(2)  ------>ZmHOX2a(1)--------->ARR14(2)             <---------At4g35610  --------->GLK1(2)   gtctctccgtttcctcctcctcagctccagtcaccgtctccggagtattctcccttcttcatcaggccgatgtcggaatcttatacacaatcttgtccct  541600                                            --------->ZAT14                                            <---------ZAT18                               --------->HSFB2a(2)                                              -----                               <---------HSFB2a(2)                                --------->KAN4(2)            <----------DOF2    --------->LBD16   --------->ZAT14                 ------>ZmHOX2a(2) ---------ICU4                <---------LBD16    <---------ZAT14                 <---------HSFB2a(1) --------YAB1         <---------GLK1(2)     --------->ZAT18                      --------->HSFB2a(1) ->ID1   <---------ALFIN1    <---------LBD16<---------ZAT14                    --------->ARR14(2)   catcatcgtctccactttaatccacattctctccgggaaaccagagtgctctgttctgcattcccatctatacatttgctggatcgttctcttcatcgtt  541700                                                                                            <------MYB83             <---------LBD16                                                                <------MYB46(1)          <------NtERF2                                                                   --------->ALFIN1         ------>NtERF2                                                                 --------->DAG2       ---------->ID1                                                                ---------->DOF2     <-----------RAV1(1)                                                           --------->ANAC58 <---------ANAC58                    --------->ANAC58                         <---------At4g35610 <---------ANAC58                    --------->ANAC58             <----------DOF2  --------->ANAC58 ---->WRKY18(1)        <---------TOE1(2)                     ---------->DOF2  --------->At4g35610 <--   caagcttgtgtcgccttcggaatcgaaggaaccatgagcacgaccatttctatcgatacagacaaaagcttttctcttgctgctcaagaaaggtgggttt  541800                                                                      --------->ATHB12                                                                      <---------MYB46(3)                                                                    <---------MYB52(1)                                                          <---------MYB46(3)--------->bZIP60(1)    --                            --------->ANAC58           <---------ANAC46     <---------bZIP60(1)  <---                            --------->ANAC58           <---------ANAC58     --------->ANAC46     <---              <----------DOF2    --------->ALFIN1      <---------ANAC58 <---------WOX13(1)       <---   <---------TOE2(3)        --------->ANAC46          <-----------------------TaNAC69(2)         <---   <---------TOE1(3)     -------->P         --------->ALFIN1       --------->LBD16           <------- -------MYB46(3)         <---------REM1(2)<-----------RAV1(1)     <---------DEAR3(1)         ========   tggttagggttatgttctttttgggcctacacgaagtgatgctaatgtggttcagagtcgtggttaagccggtgattgacgacactgtgtttggggttta  541900  Previous    Next  AGI:  At1g02570.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G47360.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40120.1) Range:  from: 541380    to: 543983    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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