Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------GLK1(1)                ----                                                                --------->GLK1(1)                <--- --->DOF2                                       <---------At4g35610     <-----------GT1         ----- -YAB1        <---------At4g35610      <---------AHL20(2)     <------ZmHOX2a(1)    <-----------GT1 <-   gtcagtaagttgattcagaagagaaatgtatagtttcttcttaaattttctgatgagaattgtaggaaatcaaattactactatttaaccattttagaat  537500                             --------->YAB1                            <------MYB83                   <-----------GT1                                   <--------P              <---------AHL20(2)                                   --------->ATHB12             <---------AHL20(2)                                    <---------MYB46(3)             --------->ARR11(3)                                   <---------YAB1   ------>ZmHOX2a(2)        <---------YAB1                        <---------TOE2(3) ----->YAB1  <---------ARR11(3)                                   <---------TOE1(3) ------ICU4  --------->AHL20(2)           ---------->DOF2      --------->ICU4    <---------CCA1(2) ---->ICU4   --------->AHL20(1)         <---------YAB1    ----------->GT1   ----------->GT1    ------ --------YAB1<---------AHL20(1)     <----------DOF2<---------HSFB2a(2) <------MYB46(1)      ---------   tatgatccatttgaatatatttttcaacatatcataaactttataaaagaattttggaagaggtatttatggttggcccagttatatctgtttcacacaa  537600                                                                                              <------                                                                                           <---------CCA1(1)                                                                                           <---------RVE1(1)                                                                                          --------->ARR11(3)                                                                                          <---------ARR11(3)                                                                                  --------->HSFB2a(2)         --------->ANAC55(1)                                                      <---------HSFC1(1)         --------->ANAC46<-------TEIL        <---------CCA1(2)                    <---------HSFB2a(2)         --------->ANAC55(2)      <---------YAB1                                 <---------LBD16 ---->DOF2              --------->AtLEC2---------->ID1       ---------->DOF2   --------->GLK1(2) >ANAC46 <---------ANAC55(2)     <---------TOE2(3)        --------->ANAC46    <---------GLK1(2)<-----   agcccataaacacataattttcgaacatgcatatttatgtttggcccatttctctgtttcacacaaagcccataaacacatattctggaacagatattta  537700                                          ------->MYC2                                          <-------MYC2                                          ------->MYC3                                          <-------MYC3                                         =======================================bZIP_DOF                                         --------->ANAC55(2)                                         --------->ANAC55(1)                                         <---------TGA1a                                         --------->TGA1a                         ----------->GT1                                         <---------ANAC55(2)                   <---------ANAC46                                         ======================================bZIP_DOF <---------YAB1                                         =======================bZIP_DOF       <---------ANAC58                                         --------->bZIP60(2)                   <---------ANAC58                                         --------->ANAC46                    <---------DOF5.7(2)                                         --------->ANAC58                  --------->DOF5.7(2)                                         <---------O2                      <---------MYB52(1)                                         --------->O2<----------DOF2     <---------ANAC58                                         --------->ANAC58                <---------ANAC58        <---                            =======================bZIP_DOF           --------->DAG2    <---------AHL20(2)                            <----------DOF2         <---------ANAC46 ---------->DOF2   <---------AHL20(2)        ===========================================bZIP_DOF         ---------->DOF2    --------->AHL20(2) ---YAB1<----------DOF2   ------>ZmHOX2a(1)----------->HVH21    --------->MYB52(1)     <---------AHL20(1) ----AHL20(2)         <-----------GT1  <---------ALFIN1     <---------------AtSPL3     --------->AHL20(1)   ttgtttaatgctttaattctaaaatttcctctttgaaaacaacacgtgacaatcgcgttttgtaagtaccgaaaggcgttagcgtgtaatataatcggac  537800                                                                           <---------MYB52(1)                                                                       ----------->RAV1(1)                          <-----------GT1                             <---------ALFIN1                          --------->MYB52(1)                         --------->MYB46(3)                   --------->TOE2(3)                               <-----------GT1                --------->ARR14(2)       --------->ANAC46       <---------GLK1(1)     <-----------GT1------>ZmHOX2a(1)    ----------->HVH21     --------->ARR11(3)            --------  <------------CBF--------->YAB1 <-------TEIL                  <---------ARR11(3)            -------- ------MYB59 ------------>CBF ----------->GT1               *TSS--------->GLK1(1)          ----------   ctaaaattgacccgtcccaatcctaaattaacgggttcaaaacccgacccgataacacacacacagatatcaccaccattagtctcacttcgaagaagca  537900                                                      --------->ANAC46                                                      --------->ANAC58                                                    --------->MYB52(1)                                                   <---------WRKY38(1)                                                   --------->ZAT14                                                   <---------ZAT14                                                   <---------WRKY12                                            --------->DEAR3(1)                                         ---------->CDC5                                      <---------At4g35610                                   <---------MYB52(1) --------->ANAC58    <---------ARR14(2)             <------NtERF2--------->LBD16                            --------->ANAC58    --------->ARR14(2)            --------->LBD16 ----------->HVH21                        --------->ANAC58 ->ANAC58                       <---------LBD16<---------DEAR3(1)            --------->LBD16xxxxxxxxx ->ANAC58                   ----------->ARR10 <---------LBD16             xxxxxxxxxxxxxxxxxxx>smallRNA(i2) >DOF2  --------->LBD16 --------->YAB1--------->At4g35610     <---------TOE2(3)     --------->YAB1   aaacaaaatccccaaattttcaacaaggataagagccggaagctcatcgccggtgaacggaactagggtttcattcatccccaaattgataacaagaaaa  538000                                                 --------->ARR14(2)                                                 <---------GLK1(2)                                                 <---------ARR14(2)                                            --------->At4g35610                                            <---------At4g35610          <---------ANAC58                  --------->ZAT2          <---------ANAC58                  <---------ZAT2            <---------ATHB12          <---------ANAC46               <---------At5g28300<---------MYB52(1)               --------      <---------ANAC58                 <-------TEIL<-------TEIL  >>>>>>>>>>>>>>>>>LFY        --------      <---------ANAC58               <---------GLK1(2)    --------->ANAC46          <---------GLK1(2)    <---------YAB1--------->REM1(1)  --------->ARR14(2)<---------ARR14(2)      <----------DOF2 xxxxxxxxxxxxxxxx>smallRNA(si3)      <---------ARR14(2)--------->ARR14(2)    ------>ZmHOX2a(1)  <----   tggctcatgcttgcgtctctacatcggcttcttctctcagattcacagctggattcgtctccgctagtcccaatggctcctctttcgattctcccaagct  538100      <----------DOF2                                      <---------HSFB2a(2) ->ANAC58<---------ANAC58         <-----------GT1    --------->ZAT14 ->ANAC58<---------ANAC58<---------TOE1(3)     <----------DOF2             <----------DOF2 ------DOF2              <---------TOE2(3)     <---------DAG2          <---------GLK1(2)        <----   ttctcttcctttcgagcctctccgttcaaggtttttttgccattttccacttttcttcactctcgaaactatggattctttagattaacttagggattgt  538200                                                                                                    -                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                        --------->LBD16       <------                                                                       <---------LBD16        -------                                                                       <---------ETT(1)      <-------                    --------->MYB111(1)                               <---------LBD16       <--------                    --------->MYB111(2)                               --------->RAP2.6(3)   ---------                    --------->MYB46(2)                             --------->KAN4(2)        ---------                    --------->MYB59                               <----------TaMYB80        <--------                    --------->MYB52(2)                        ----------->GT1            --------->LBD16     <------ZmHOX2a(1)                                      <---------At4g35610        <---------LBD16  <---------AtLEC2<---------MYB52(1)                        --------->At4g35610 <---------LBD16  <--- -----YAB1       ------------>MYB.PH3(2)                 ---------->DOF2------>NtERF2 --------->MYB52(1)   gtttgcaggaagacgaataagttagttagcgatagaaagaattggaagaattcaactccgaaagctgtatattccggcaatctctggacaccggagattc  538300    ------>ZmHOX2a(1) -------->ARR14(2) ----->ANAC55(2) ------ANAC58 ------ANAC58           <---------ANAC46 ---ARR14(2)            ----------->GT1 -->GLK1(2)             <------MYB83 --ARR14(2)             <---------ANAC55(2) -HSFB2a(1)             <------MYB46(1) >HSFC1(2)     <------MYB46(1) >HSFB2a(1)    <------MYB83                                                           <---------WRKY38(1) --TaMYB80    --------->MYB59         <----------DOF2                                --------->WRKY18(1) ------ANAC55(2)     <---------MYB52(1)   <-----------GT1                  <----------DOF2   --------   cgtctcctcaaggagtttggtccattaggtgaaacttgagcttttaaccatgttcttgaactgtgtgattttgaactctttttgatggtcaagtctggat  538400  Previous    Next  AGI:  At1g02560.1    Description:  CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1); endopeptidase Clp. Identical to ATP-dependent Clp protease proteolytic subunit 5, chloroplast precursor (CLPP5) [Arabidopsis Thaliana] (GB:Q9S834); similar to CLPP3 (Clp protease proteolytic subunit 3), endopeptidase Clp [Arabidopsis thaliana] (TAIR:AT1G66670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40122.1); contains InterPro domain Peptidase S14, ClpP; (InterPro:IPR001907) Range:  from: 537860    to: 540109    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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