Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       ---------->DOF2                    --------->ANAC58   --------->AHL20(2)           <---------ICU4   <---------AHL20(2)           --------->ATHB12 --------AHL20(2)       --------->GLK1(2) ------->AHL20(2)      <---------GLK1(2)--------->ANAC58  ----------->GT1 ----YAB1          ---------->DOF2     ------>NtERF2  ---------->DOF2                    <---------AHL20(2) -DOF2   ----------->GT1<-----------ARR10           <---------ATHB12                    --------->AHL20(2)   attaattaaaagtgtataaaaaaaagaatcttattcattgccgagcaactacaaatcaaagtgtaaaactataaaactttgttactaatataaaattgac  529400                                                                                  --------->ZAT6                                                                                  <-----------GT1                                                                           <---------AHL20(2)     <--                                                                           <---------AHL20(1)    ----                                                                           --------->AHL20(2)    ----          ----------->GT1              <---------AHL20(2)            --------->TOE2(3)         <-----      ---------->DOF2                  --------->AHL20(2)            --------->YAB1     --------->ARR11(3)    <---------ATHB12      <----------DOF2<---------AHL20(2)      <---------AHL20(2)     <---------ARR11(3)   ttacaaatcaaagtgtaaaactatacaactttgtaactaatataaatttgactaatttcatttttgtttaatcttattttattttcactaaatctttata  529500                                                <---------ICU4                                               --------->ICU4                              --------->ALFIN1                                    --------->AHL20(2)                                   <---------TGA1a                                    <---------AHL20(2)                                   <---------O2                                   <---------------AGL15                   <---------AHL20(2)                                <---------AHL20(2)                ----------->GT1        --------->TGA1a                                <---------YAB1 <---------YAB1    <---------TOE1(2)       --------->O2                               <---------AHL20(2)                <---------TOE2(2)<---------GLK1(1) -------MYB59                  --------->AHL20(2)        <---------ZAT18  <---------AHL20(2) ----->ANAC55(2)   --------->ANAC55(2)      <---------YAB1      <-----------RAV1(2)  --------->YAB1 ----->ANAC46      <---------ANAC55(2)    ----------->GT1--------->ZAT14  --------->AHL20(1) ------GT1       <-----------GT1--------->AHL20(2)       <---------ZAT14  --------->AHL20(2)  <------   cttaactactaatctaatattacatattagtattttaattaatatggtgataatttctgtgaactctcaggtaaaatttaatagaaatcacaagtggggg  529600                                                                                <---------LBD16  ----                                                                <---------TOE2(3)               -----                                                            <----------DOF2 <----------DOF2    ------                                                    ------>ZmHOX2a(1)      <---------DAG2     -------        --------->AHL20(2)                         --------->TOE2(3)  --------->HSFB2a(2)  <------ZmHOX2a(1) ---ANAC46                                         --------->TOE1(3)  <---------HSFB2a(2)<---------TOE2(3)   gttttgggatttatatcagtaaaactctcaactacgactggtctgaaatgtttccttaaattctttaatgttctcgaccttttctgggttttaggaaaaa  529700                                                           --------->AHL20(2)                                                          <---------YAB1                                                        --------->YAB1                         *TSS                                                        <--------HAHB4                        <------      --------->DAG2                                    <---------ICU4                        -------     ---------->DOF2                      <---------At4g35610  <-----------GT1         --------->YAB1 ------->GT1                           ---------->DOF2 <---------YAB1                 --------->ICU4 ------>GT1                         >>>>>>>>>TBF1  <----------DOF2             ------>ZmHOX2a(2) ---- --->DAG2     <---------DAG2    <------ZmHOX2a(1)  <---------DAG2              ====================== --->DOF2     <----------DOF2 <---------TOE2(3)------>ZmHOX2a(1)<---------At5g28300  <---------KAN4(2)   gttaaaaaaaagctctctttttgtctgggttttaggaagaagaaagctcctaactttatcattatataccgtcgagttcgatctgagaatgatcagattt  529800                                                   <------NtERF2                                                  --------->LBD16                                                 --------->DEAR3(1)                                                 <---------ANAC46                                                <---------LBD16                                                --------->ATERF1(1)                                                --------->RAP2.3(1)                                               <---------RRTF1(1)                                               <---------ATERF1(1)                                               ------>NtERF2                                               <---------ERF1                                               <---------RAP2.3(1)                                               <---------RAP2.6(1)                                              --------->DEAR3(1)                                              <---------RAP2.3(2)                                              <---------DEAR3(1)                                             --------->ATERF1(1)                                             <------NtERF2                                             --------->RAP2.3(1)                                            <---------ATERF1(1)                                            ------>NtERF2                                            <---------RRTF1(1)                                            <---------RAP2.3(1)                                            <---------DEAR4(2)                                            <---------ORA47(2)                                           <---------ATERF1(2)                                           <---------DEAR3(1)                                           --------->bZIP60(1)                                           <---------bZIP60(1)                                           <---------bZIP60(2)                                           <---------O2                            <------NtERF2  <---------RRTF1(3)                           --------->LBD16 --------->ATERF1(2)                          --------->RAP2.3(2)<---------ABI4(2)                          <---------ANAC46 <---------RAP2.3(2)                         --------->RAP2.3(1)<---------ERF1                       --------->DEAR3(1)  <---------RAP2.3(3)                      <---------At4g35610  <---------RRTF1(2)                      <------NtERF2       --------->RAP2.6(3)                --------->KAN4(1)          <---------YAB1 <---------LBD16----------->TGA1                    ------->TEIL       ------>ZmHOX2a(1)------>NtERF2   ----------->HVH21                   <---------KAN4(2) ---GLK1(1)           --------->At4g35610--------->REM1(2)               --------->ANAC58 -->GLK1(1)           --------->ATERF1(1)--------->MYB52(1)        <-----------HVH21 ----->TOE2(3)    <-----------HVH21 ------->TEIL<------NtERF2--------->GLK1(2)       <---------ARR11(3) =============HOX2a_HOX2a<------NtERF2 <-----------HVH21   ------>NtERF2 --------->ANAC58           -   cttaaaatccttctgatttgtgtcagcgccggaaaatgaaccgtgacggcgccggagaaggcgactctgtttcacacgaacattcaacatctaaaaccga  529900                                                --------->TOE1(2)                                             --------->GLK1(2)              --------->ARR14(2)   <---------ANAC46              <---------ARR14(2)   <---------ANAC58        --------->ANAC58  --------->ANAC46  <---------GLK1(2)        --------->ANAC58  --------->ANAC58  <---------ARR14(2)                                     <-   <----------ID1         --------->ANAC58  --------->ARR14(2)        <-----------RAV1(1)          <-  --------->DAG2       <---------REM1(2)   <---------At4g35610      --------->CCA1(2)              <- --------->DOF2   ------>ZmHOX2a(1)<---------ANAC58              <---------YAB1        <----------DOF2   tgaaaaggccaagacagttcctctctacaagctatttgcgtttgcagattccttcgatgtgtttttgatgatatgtggctcacttggagctattgggaat  530000                                    ------>ZmHOX2a(2)                                  --------->ARR11(3)       <-----------GT1            <---------ARR11(3)                     --------->ARR11(3) --------->ALFIN1             <------MYB46(1)                        ---------->DOF2           ------ --------ANAC46               <------MYB83                  --------->YAB1                    <------ --------ANAC58              --------->MYB46(2)    ----------->GT1----------->RAV1(1)       --------- --------ANAC58              <---------MYB46(3) <----------DOF2  <----------ID1   <---------TOE2(3)   ggagtgtgtttacctcttatgacattgttgtttggtgatctcatcgattcctttggaaaaaatcagaacaacaaagacattgttgatgttgtctcaaagg  530100                           >>>>>>>>>ARR2                     <----------DOF2 ----->GT1<---------DAG2  --------->ATHB12       <---------------AtSPL8                    <-------TEIL ---TOE2(3)          <---------DAG2              --------------->AtSPL8            ---------->ID1 ->DOF2   <----------DOF2<---------YAB1  <------ZmHOX2a(2)                  <---------TOE2(3)      --   taaaaatccaaactttttttgaactttttgattgtgttcttagatcacattttagtactaatactgtgtcttcttatataggtttgtcttaaattcgtct  530200                                               --------->LBD16                                              --------->ANAC46                                    --------->ANAC58   <---------ANAC58                                    --------->ANAC58   <---------ANAC58            --------->ICU4<---                     --------->ATERF1(1)     <---------LBD16      <-------GAMYB   <---------TOE2(3)                    --------->ZAT2 --------->SPL7 --------->ARR14(2)              <---------TOE1(3)<-                    <---------At4g35610      --------->TOE1(2)   <-----------RAV1(1)<------ZmHOX2a(1) ------->TOE2(3)    --------->At4g35610<---------ICU4  <---------ANAC46      ------->TEIL        XXXX   accttggacttggaagacttggagcagcctttcttcgtaagtcattacccgcgatttgcttgtttctctgttgcaattgcatctaaggattagagaattg  530300  Previous    Next  AGI:  At1g02530.1    Description:  PGP12 (P-GLYCOPROTEIN 12); ATPase, coupled to transmembrane movement of substances. Identical to Multidrug resistance protein 16 (MDR16) [Arabidopsis Thaliana] (GB:Q9FWX8); similar to PGP11 (P-GLYCOPROTEIN 11), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT1G02520.1); similar to PGP5 (P-GLYCOPROTEIN 5), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G01830.1); similar to MDR3/PGP3 (P-GLYCOPROTEIN 3), ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] (TAIR:AT4G01820.1); similar to CjMDR1 [Coptis japonica] (GB:BAB62040.1); similar to Range:  from: 529795    to: 534677    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version