Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ---------->DOF2                                                                    ------>ZmHOX2a(2)                                                                   <------ZmHOX2a(2)                                                                   --------->CCA1(2)   --------->MYB46(3)                                             --------->AGP1 ----->ANAC58                                                     --------->ARR11(3) ----->ANAC58         --------->YAB1                              <---------ARR11(3) >YAB1                --------->AHL20(2)  <---------WOX13(1)      <---------AGP1           <---------   cgctaacaaatgaaacatggacaattaaaaatagattaaaactaattgctactacaatgcaagattaagatctaaagccttgtcttcgtttcgctcttct  498100                                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                              --------->ANAC58                                                                              --------->ANAC58                                                                           <---------SPL7                                                                <------NtERF2 --------->ANAC46                                                                --------->At4g35610                                                                --------->ATERF1(1)                                                               <---------ATERF1(1)                                                               ------>NtERF2--------->SPL1(1)                                                               <---------ERF1--------->SPL7                                                               <---------RAP2.3(1)                                                              <---------ANAC46----------->HVH21     <                                                              <---------RAP2.3(2)                   -                                                 <---------MYB52(2)      <---------------AtSPL3    --                                             --------->LBD16  <---------DEAR3(1)                   --                                   <---------ANAC58           <---------RAP2.6(2)           ---------    ------>ZmHOX2a(2)        <-----------GT1--------->ANAC46  <---------RAP2.3(3)          --------->GLK1(1)  <---------ARR11(3) <----------DOF2       ------>ZmHOX2a(2) --------->RAP2.6(3)           <---------GLK1(1)  --------->ARR11(3)<---------DAG2 <---------ANAC58   --------->TOE2(3)  --------------->AtSPL3  <--- -DOF2           <---------ALFIN1  <---------ANAC46  --------->YAB1    ------------------>SPL14 -----   gtttgatcttcttcttgttccacctttgtattttcttccttgtgatccgaaacaaacatcaatggcggcttcaaacccgtacgacactgagagaaatcct  498200                                                             ------>NtERF2                                                            <---------bZIP60(1)                                                            --------->ANAC58                                                            --------->ANAC58                                                         <---------TGA1a           --------->LBD16                    --------->GLK1(1)         <---------LBD16             --------->LBD16     --------->TGA1a       --------->ANAC58              ------>NtERF2       --------->ANAC46       --------->ANAC58       <----------DOF2 <---------GLK1(1)   <---------GLK1(2) ---------At4g35610        ------->TEIL  <---------MYB52(1) --------->ANAC46                       -- -------->At4g35610    <---------LBD16  <-------GAMYB    <---------O2                             <-- ------->LBD16      <---------ZAT14 --------->ANAC46     --------->O2                             <-- ---->NtERF2 --------->ARR14(2)     --------->DEAR3(1)------>ZmHOX2a(1)                           --- >ARR14(2)--------->RAP2.6(2) =====================================bZIP_DOF    --------->ZAT6     <-- ------LBD16<------NtERF2--------->LBD16===========================MYC_MYB--------->At4g35610  ------ ->ZmHOX2a(1)<---------ARR14(2)    <---------LBD16 ------>ZmHOX2a(1)      <---------At4g35610  <-----   ccggctgaaacgccggaactactataccggacctttctccgccgttagatttcctcctcacgacgccagaattttcagctaactcttctcgtctacgttt  498300 ------->LBD16 -------ANAC58                         --------->WOX13(1) -------ANAC46                      ------->TEIL ------>ANAC55(2)       --------->TOE1(3) -------ANAC58          --------->TOE2(3) --->ARR14(2)          --------->At4g35610                                                      ----- ----ARR14(2)<---------ZAT6---------->DOF2                ------>ZmHOX2a(1)             -------->P<--   ccgtgcttcttgatagtgtttgataagcttaaagaacgtatcaatcttcttctcttcttcctcttcttcgtcttctcttactctcttatcaaccctgatc  498400                                              <--------ATHB1                        --------->DAG2                                              <---------ICU4                       ---------->DOF2           <---------ALFIN1                   --------->YAB1             <-------TEIL  <----------DOF2     <---------ICU4          --------->ATHB51        <------ZmHOX2a(1) ->ZmHOX2a(2) <---------GLK1(2)              --------->ICU4         <---------TOE2(3)     <---------WOX13(1) -------CCA1(2)      <---------YAB1          <---------ATHB51       <---------TOE1(3)   --------->ATHB12   gtctctttgctctccacattctcatccttgctcatggtctctagggaataattgtataaactaaattgtttaggatacatttagagaaagtgattgattt  498500                                                       --------->AHL20(1)                                                 <----------ID1                                                 ----------->GT1                                          <----------DOF2               <---------HSFB2a(1)                                          --------------->AGL15         --------->HSFC1(2)                                          <---------------AGL15         --------->HSFB2a(1)                                         <-----------------AGL3     --------->ANAC55(2)                                         <-----------------AG       <---------ANAC55(2)                                         ----------------->AGL3     --------->ANAC58                                         <-----------------AGL1     --------->ANAC58                                <---------At4g35610    <---------AHL20(2)                                --------->At4g35610    --------->AHL20(2)                           <---------ANAC58     <---------TOE2(3)   --------->ANAC46                *TSS   ------>ZmHOX2a(1) <-----------------AGL2--------->YAB1           ----------->GT1 <---------ANAC58   ---------->DOF2  <---------ICU4      ---------->DOF2  <     <---------ZAT14   <----------DOF2<----------DOF2 --------->AHL20(2)<---------HSFC1(2)       ----   tggagagtgaagaaggcaaataatccttttcgtctgatgactttcttttaaaggaaaaaaattagtcatcacgaaacttcttagaaaaagactaaaacac  498600                                                                                                  <--                                                                                          --------->MYB111(1)                                                                                          --------->MYB52(2)                                                                                          --------->MYB46(2)              <-----------GT1                                                             --------->MYB111(2)           <----------DOF2                                                                --------->MYB59      ------>NtERF2                                   --------->TOE2(3)     <---------CCA1(1)     <--     --------->ANAC46                              <-----------GT1          <---------RVE1(1)    ----     <---------ALFIN1      ------>ZmHOX2a(1)     <---------AHL20(2)        <---------ARR11(3)    <---  --------->PCF2           <----------DOF2      --------->AHL20(2)         --------->ARR11(3) ------- -----------HVH21       ---------->ID1    <-----------GT1      ----------->GT1         ------------>MYB.PH3(2) ------->RAV1(2)   <----------DOF2    ------>ZmHOX2a(1)      --------->MYB52(1)  <-----------GT1<----   cctgtccccacctcttttactctttagtccttttagtttcctagttacaatttaaaccacaaaaaacgaaaattggagatatttttccaagttagttagg  498700                                                                      <---------YAB1                                                                      <---------AHL20(2)                                                                    --------->YAB1                                                                  --------->AHL20(2)                                                                 <---------ICU4                                                                --------->ICU4  <---------AHL20(2)                                          <---------ICU4  --------->AHL20(2)                                         --------->ICU4 --------->AHL20(2)                                          <---------YAB1                   ------- -------CCA1(1)                                            --------->YAB1                    -------- -------RVE1(1)                                            <---------ICU4             <---------PCF5 ----->ARR11(3)                                           <---------YAB1             <----------ID1 ------ARR11(3)            <----------DOF2                --------->ICU4          --------->DAG2 -->MYB59         <---------YAB1                          <---------ATHB12----------->GT1<-----------RAV1(2) --ZmHOX2a(1) <----------DOF2        <---------ANAC46--------->YAB1<---------YAB1---------->DOF2 ----   atatttaatttcgaaactttataaatgggttttttggttccctgtaaattcaaaatagtaatcataatttttataattgttaaaaaagggaccaggggta  498800                                       <-----------RAV1(2)                                      --------->TGA2(2)                                     <-----------HVH21                                     --------->TOE2(3)                                     <-----------TGA1                                    <---------ANAC58                                    --------->ANAC46                          --------->TOE1(3)                          --------->TOE2(3)                         ----------->GT1 --------->At4g35610                   --------->GLK1(1)<---------ANAC55(2)                                     ---------                  <---------ARR11(3)--------->bZIP60(1)                                     <--------               <------NtERF2        --------->ANAC55(2)                             <---------ANAC55(2)            <<<<<<<<<<CAMTA3        --------->TGA2(1)                            <---------ARR14(2)            <<<<<<<<<<CAMTA5        <---------TGA2(1)                       ------------>MYB.PH3(1)            <---------LBD16         <---------bZIP60(1)                   ---------->DOF2   ---------     ---------->DOF2    <---------TOE2(3)<---------At4g35610        ----------->HVH21       <-------- ----------->GT1  --------->ARR11(3)<---------ANAC58               <-----------HVH21--------->ANAC55(2) -->At5g28300 --------->LBD16     <-----------GT1                 --------->O2   <---------MYB52(1) --->GT1    <<<<<<<<<<CAMTA1  <---------YAB1  <---------YAB1----------->HVH21    --------->ARR14(2) < ------>DOF2<<<<<<<<<<CAMTA2 --------->AHL20(2)  <---------ANAC46 <---------O2 <---------MYB46(3)   -   aaagagtaaaagaacgcggagatatcaacgttaaaattacgtcagatgatgatgtgtttgggatgacaacgtgacatgaagcggttacgagatgatgtca  498900      --------->TGA2(1)      --------->ANAC55(2)      --------->bZIP60(1)      <---------ANAC46      <---------ANAC55(2)      <---------bZIP60(1)      <---------TGA2(1)     ----------->STF1    <---------TGA2(2)   ----------->TGA1 <---------ICU4 --------->YAB1                                                                                ------ >TGA2(1)                                                         --------->YAB1              <------ -TGA2(1)                                                         <---------ICU4              <------ >bZIP60(1)                                       ---------->DOF2<---------ATHB12        --------->DOF5.7(2) -bZIP60(1)         --------->ZAT6  --------->CCA1(2)            --------->ICU4        <---------ANAC58 ---------ATHB12  ----------->RAV1(1)    <----------DOF2       --------->YAB1          <---------ANAC58 -------->ICU4   --------->ANAC46   <---------GLK1(1) ---------->DOF2                  <---------ANAC46   caatgatgacgtaatctatacaacactaatctacttggatatacttttgaaataaagaaagactctaatcatcaaaaacttgacttgatgcgtttacttt  499000  Previous    Next  AGI:  At1g02450.1    Description:  NIMIN-1/NIMIN1; protein binding Range:  from: 497976    to: 498516    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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