Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <-------TEIL                                                                 <------ZmHOX2a(2)                                                                --------->ARR14(2)                                                                --------->AGP1                                                                <---------ARR14(2)             --------->YAB1                                     --------->ARR11(3)             <---------ICU4                                     <---------ARR11(3)            --------->ICU4                                --------->RAP2.6(2)       <-------GAMYB                                      --------->ANAC58      <---------DEAR3(1)            <---------YAB1        --------->ANAC46      <---------ANAC46              --------->ANAC58      --------->ANAC58<---------DEAR3(1)   <---------DEAR3(1)            =======================HOX2a_HOX2a   --------->ETT(2) ------->HSFB2a(1)               <------ZmHOX2a(2)    <---------RAP2.6(2) ------>ZmHOX2a(2) --------HSFB2a(1)         <---------ANAC46         <-----------RAV1(1) <---------ARR14(2) ------->HSFC1(2)      <---------GLK1(1)         =======================HOX2a_HOX2a --------HSFC1(2)      --------->GLK1(1)         ========================HOX2a_HOX2a -------ARR14(2)       --------->At4g35610       <------ZmHOX2a(1)------>ZmHOX2a(2) ------>GLK1(2)        <---------At4g35610   --------->ICU4<------NtERF2--------->ARR14(2)         <- ---------ARR10    =====================================HOX2a_HOX2a   <---------ETT(2)          ----- -------ARR11(3)   ===================HOX2a_HOX2a================================HOX2a_HOX2a    <---- ------>ARR14(2)   ------>ZmHOX2a(2)--------->ANAC58--------->ALFIN1--------->LBD16       <------NtERF2 ------>ARR11(3)--------->ATHB12--------->ARR11(3)<---------ARR14(2)<-----------HVH21    ------>NtERF2 ------GLK1(2) <---------YAB1  <------ZmHOX2a(1)<---------YAB1----------->ARR10         ----------->HVH21   aatcttcggcgttgattatgatcggagatgcgaggatcacgatagccatgaggattgtggccgcaagatccgtcgatcggcgagttttaggcgacatgtt  490500                                                                                                   --                                                                                                <----                                                                                                -----                                                                                      <---------YAB1                                                                   ----------->GT1  <---------ICU4<--     *TSS                       ---------->DOF2                  <---------ZAT14   <---------YAB1<--- ----------GT1               ----------->TBP             ------->TEIL       --------->HSFB2a(2) ----- ------>GT1                  <---------AHL20(2)       ----------->GT1       <---------HSFB2a(2)------ -----REM1(1)          <---------ANAC46          --------->HSFB2a(2)       <---------LBD16     <-----   gtaacaatgttttgggcttagacttgtgtatataaaaagatgatcaaacttatggaatgtatattagtgaagttatttgtggaagattattacagagaga  490600                      <---------ANAC46                      --------->ANAC55(2)                      <---------ANAC55(2)             ----------->HVH21        --------->AHL20(2)                      --------->TOE2(3)        <---------AHL20(2)                      --------->TOE1(3)            --------->MYB59   ------------>CBF   ----------->GT1         --------->ARR11(3)      <---------------AGL15  --------->YAB1      <---------ANAC58        <---------ARR11(3)      --------------->AGL15 ------->WOX13(1)     <---------ANAC58       --------->GLK1(1)       <-----------------AGL3     ----- -----ARR11(3)   <---------ICU4              <---------GLK1(1)       ----------------->AGL3    ------ ---->ARR11(3)   --------->AHL20(2)    --------->CCA1(2)             ----------------->AGL2    ------ -----TEIL      <---------ATHB51      <---------ARR14(2)       <---------GLK1(2)               ------ ---ZmHOX2a(2)  --------->ICU4        --------->ARR11(3)       --------->ARR14(2)              ------ ---->AGP1      --------->AHL20(2)    <---------ARR11(3)       <---------ARR14(2)              ------ --->GLK1(1)    <---------AHL20(2)    --------->ARR14(2)   --------->At4g35610   <-------TEIL  <----- ----GLK1(1)--------->AHL20(2)        --------->ARR11(1)   <---------At4g35610  --------->CCA1(2)   tccatcacaataaatgaaataatttcgtaataacatcggagatatggaaatcttaaatgacagcagatttgtccaaaattagatacatgtaataaacacg  490700 ---->TOE2(3) ----->GT1 --->ANAC58               <---------ANAC58 --->ANAC55(1)            <---------ANAC46                                          --------->AHL20(2) --->ANAC46               <---------ANAC58             --------->ATHB12             --------->YAB1 --->ANAC58          <---------KAN4(1)     <---------YAB1   <----------ID1      <---------YAB1    --- ----ANAC55(2)  --------->YAB1 --------->ZAT14       <----------DOF2--------->AHL20(2)           <---   ttaaatttaagtatgaaatgacaatattccttgtatactctaattttcatttgggctttattgggccaaataatatgggcttacaattaaaaattcgact  490800                                          <---------YAB1                                     --------->YAB1                              --------->DEAR3(1)                             --------->DEAR3(2)               <---------AHL20(2)  <---------ARR11(3)              <---------AHL20(2)   --------->ARR11(3)                                 <----------DOF2              <---------AHL20(1)------>MYB46(1)                                       <---------DAG2    ----------->GT1    ---------->DOF2<----------DOF2                        <---------ANAC58 ------>MYB52(1)   --------------------->WRI1  -------->P---------->DOF2     <---------ANAC58 ------ZAT14  --------->AHL20(2)------>MYB83  <-----------GT1        <---------MYB52(1)   gaacggatgtgaataatttttttttgaaagaaccgactatctttattcttaccagaccacaaagacaagtcgttgtttgacttgttgactttttttttaa  490900                                                                            ----------->RAV1(1)                                                                            ------>NtERF2                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                           --------->ANAC46                                                                           <---------bZIP60(1)                                                                           --------->O2                                                                           --------->bZIP60(1)                                                             ------>ZmHOX2a(2)                                                            <---------GLK1(1)                                                           --------->ARR11(3)     --------->ANAC58                                                           <---------ARR11(3)     --------->ANAC58                                                       <----------DOF2   <---------ATERF1(1)                                                   --------->TGA1a       ------>NtERF2                                                   --------->TGA2(1)    --------->DREB2C(2)                                                   <---------O2         --------->At1g77200                                                   <---------ANAC58     --------->DEAR3(1)                                                   ===============bZIP_DOF<------NtERF2                                                   --------->O2         --------->RAP2.3(3)                                                   <---------bZIP60(2)  ----------->HVH21                                                   <---------ANAC46    --------->RAP2.3(1)                            <---------GLK1(2)      <---------TGA1a     --------->ERF1                            --------->ARR11(3)     <---------TGA2(1)   <------NtERF2                         *TSS<---------RVE1(1)     <---------ANAC58    --------->DEAR3(2)  <---------MYB52(1)                       <-----------HVH21           --------->ANAC55(2)<---------ATERF1(1) ------>NtERF2                      <---------ANAC58             <---------bZIP60(1)--------->LBD16     <---------SPL7                      <---------bZIP60(1)          --------->bZIP60(1)------>NtERF2      --------->DEAR3(1)                      <---------ANAC46            ----------->STF1   --------->ANAC46 --------->ANAC58                      <---------ANAC58          ----------->TGA1    --------->MYB46(3)--------->ANAC46                 <-----------RAV1(1)            ----------->HVH21   <---------MYB55(2)--------->ANAC58   tccacaagtttttttttttttgttgcgtcagattttttgtttgttttccagtgacgtctttgatctccctcccgccgacgacacaagcacgccgtctggt  491000                                           ------>ZmHOX2a(1)                                  <---------ANAC58                                  <---------ANAC46                                  <---------ANAC58                                <---------ANAC58                        --------->YAB1                                <---------ANAC46    <------MYB83<---------AHL20(2)                                <---------ANAC58    <------MYB46(1)     <---------ICU4                             <----------DOF2        ----------->GT1    <------ZmHOX2a(2)                       <----------DOF2     ===================================HOX2a_HOX2a  <---------At4g35610             <------------------------ANAC81 <----------DOF2  <----------DOF2  <------NtERF2   ttacctgtaagtcttctattctcttcttttcctttcgcgtgcttcctctttgataggttacattctttaatcgatcatggcatcgttcttggcctctgat  491100                                                         --------->LBD16                                                        <---------ANAC46                                                        <---------HSFB2a(2)                                                        <---------ANAC58                                                        --------->HSFB2a(2)                                                        <---------ANAC58                                                        <---------ANAC55(2)                                                       <---------LBD16                                                     --------->ALFIN1                                          ------>ZmHOX2a(2)                                  <---------YAB1    <-------GAMYB                                  <---------ATHB51<---------AtMYB61                               --------->LBD16  --------->LBD16                               ------------>ATHB5<------NtERF2                              --------->LBD16  --------->DEAR3(1)                               -----                             <---------LBD16  <---------LBD16           <---------ANAC58        -----                         <-----------GT1--------->ARR11(3)    ----------->GT1                   -----                 <---------AHL20(2)--------->ATHB12<---------MYB46(3)   <---------ANAC58        -----   tcgattacgctcgggtgattttttttttttcccccgattattgatctcgccggaggttgcggaagggagaaattgggtttcaaattttcgaaattttcaa  491200                                                <---------ANAC46                                              <---------ANAC58                   --------->AHL20(2)                                              <---------ANAC46                   <---------ICU4                                              <---------ANAC58                  <---------AHL20(2)                                             --------->ALFIN1                   --------->AHL20(2)                                             <---------AtMYB61                 <---------AHL20(1)   <              <---------ANAC58             <---------ANAC58                   --------->YAB1        < ---->ANAC46  <---------ANAC58             <-----------RAV1(1)              --------->AHL20(2)      < ---->ANAC55(2)    <---------YAB1          <---------ANAC46                 <---------AHL20(2)   ---- ---->ANAC58  <---------ANAC46   --------->ANAC55(2)               <---------ETT(2)          ------>NtERF2 ---->ANAC58 <-------TEIL <---------ZAT18  <---------ANAC58        --------->ETT(2) <-----------GT1 <   gtaatgtaatctgggttcgtgtttattgtgcagataagtgtttttgtgtggtgtctgtgtctcactgtgtcgatagattaaaataatttctcttcggcca  491300               --------->REM1(2)            <---------ANAC58            <---------ANAC58        ---------->DOF2                                      <---------ARR11(3)      --------->ETT(2)                                       --------->ARR11(3) ---------bZIP60(2)                               --------->TOE1(3) ---------ANAC58                                  --------->TOE2(3) ---------ANAC46                                 <---------HSFB2a(1)                  --------->AHL20(2) ----->bZIP60(2)      <---------ARR14(2)         --------->HSFC1(2)  --------->ARR14(2)   <---------YAB1 ---------ANAC58     <------ZmHOX2a(1)           <---------HSFC1(2)  <---------ARR14(2)<---------AHL20(2)   tgtcgtggtcgaaagcttgtagaggaactcgaatttcttcatatttagagaaccttcatcgaacatctcagtatccaaggtaattgaattttatgcatgc  491400  Previous    Next  AGI:  At1g02405.1    Description:  proline-rich family protein. similar to proline-rich family protein [Arabidopsis thaliana] (TAIR:AT1G70990.1); contains domain PRICHEXTENSN (PR01217) Range:  from: 489979    to: 490505    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02410.1    Description:  cytochrome c oxidase assembly protein CtaG / Cox11 family. similar to unnamed protein product [Vitis vinifera] (GB:CAO62202.1); contains InterPro domain Cytochrome c oxidase assembly protein CtaG/Cox11; (InterPro:IPR007533) Range:  from: 490925    to: 492926    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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