Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              <-----------GT1                                                                           <---------AHL20(2)                                                                    <---------MYB46(3)                                                                    ----------->GT1 --->PIF5                                                          <--------P --->MYC2                                                    --------->ARR14(2) ----PIF5                                                    <---------ARR14(2) ----MYC2                                              --------->YAB1  <---------AHL20(2) ----->TOE1(2)            ---------->DOF2             <-------TEIL<---------MYB52(1) --->MYC4               --------->YAB1       >>>>>>>>>ARR2   --------->ARR11(3) ----MYC3            <---------------AGL15   >>>>>>>>>ARR1   <---------ARR11(3)           --------->MYB52(1) --->MYC3            --------------->AGL15  --------->ATHB12--------->CCA1(1)      ----------->GT1 ->TEIL       --------->ZAT18              <---------YAB1   --------->RVE1(1)<-----------GT1        <   gtgctaaaactataagtctactactataaaaagacttgtatttgtatgattgtatattcataatatctggtagttaatttatcccttgtaaaaaacagat  480500                                                                                                -----                                                                                       <---------AHL20(2)                                                           --------------->AtSPL3     --------->AHL20(2)                                                           --------------->AtSPL8------>NtERF2  <----                                                        --------->ZAT14          <---------RAP2.6(3)                                 <------MYB46(1)        <---------ZAT14         --------->DEAR3(1)                                 <------MYB83         --------->ANAC46          --------->RAP2.6(2)                          <---------GLK1(2)         --------->ZAT6   ---------->DOF2<----------DOF2           <------------MYB.PH3(2)        --------->ARR11(3)   --------->SPL7  --------->DEAR3(2) ---------TOE2(3)       <---------TOE2(3) <---------ARR11(3) <---------SPL7   --------->At4g35610   ttaagttaacttaacaaactcttatttagattatttggtttcgatatctaattcacactaaaccgtaccaaaaaagaagaagccgactttaaattgaatt  480600                                                                                       <---------DAG2                                                                                       <----------DOF2                                                                                     ------->TEIL                                                                                 --------------->AtSPL8                                   --------->ANAC55(2)                          <---------ANAC58                                   --------->ANAC58                             <---------ANAC46                        <----------DOF2                                         <---------ANAC58  ------>ZmHOX2a(1)   <---------YAB1                                           ------->TEIL --------->TOE1(3)   <-----------GT1                       --------->RAP2.6(2) <-------TEIL --------->TOE2(3) <---------AHL20(2)   --------->ICU4---------->DOF2          --------->SPL7     <-- --->ATHB1<---------At4g35610      --------->ANAC58  <------ZmHOX2a(2)     ------>NtERF2         <--- -----ICU4--------->At4g35610      --------->ANAC46 --------->ARR11(3)     <---------------AtSPL3----   attccttaagtcttctcacattttatctttgctagagacgcaatatttggaatagatcaagccgaactaaatatcgacgcgtacgtgtacttttcagatt  480700                         --------->ANAC58                         --------->ANAC58                         --------->AtLEC2                       --------->YAB1                      <---------ATHB12              --------->YAB1              <---------ICU4             <---------AHL20(2)      <---------HSFB2a(2)           --------->TOE2(3)         --------->HSFB2a(2)         <------ZmHOX2a(2)         --------->SPL7        <---------YAB1                <-------MYC3        <---------ARR11(3)    <------------------SPL14   ------------>CBF              ------->MYC3        --------->ARR11(3)    --------->At4g35610       --------->TOE2(3)              <-------MYC2       <---------At4g35610    <---------ZAT2  --------->ALFIN1              --------->ICU4 ---------GT1--------->AHL20(2)   <---------SPL1(1) --------->YAB1     --------->TOE1(1)       ------ ------AHL20(2)  --------->YAB1<---------------AtSPL3  --------->YAB1 ------>ZmHOX2a(1)------->MYC2 ----->AHL20(2)  <-----------GT1 <---------SPL7    --------->MYB46(3) XXXXXXXXXXXXXXXXXXXX>MIR780.2   taaacattcagatcattaattacaatcatgcaagctgtacgggaagaagtggaaccatcatcaatggcattcctcgtaaatatcaaacacgttcgaaggg  480800     --------->TGA2(2)    <-----------TGA1                                  --------->AtLEC2   <---------ANAC55(2)        <---------At4g35610   *TSS                                 ----------->GT1   --------->ANAC46           --------->At4g35610<---------ETT(2)                 --------->AHL20(2)   --------->ANAC55(2)    <-----------HVH21      --------->ETT(2)            ------>NtERF2   --------->bZIP60(1)   ------->GAMYB    <---------MYB52(1)                --------->REM1(1) <-----------GT1      <-----------GT1   <---------ANAC58                  ----------->RAV1(1) <------ ----->GT1       --------->AHL20(2)     <---------ANAC58                 ----------->HVH21 --------->ICU4   tatttacgtcatggtctcattatataactgtcagagccccttccgtttctctcgacatgcagagtctagattccagcgacaccatataatatagttatta  480900                                  ------>ZmHOX2a(2)                                 <------ZmHOX2a(2)                                <---------ARR14(2)                                --------->ARR14(2)                                <---------ARR14(3)                                --------->ARR14(3)                                --------->ARR11(3)                                <---------AGP1                                <---------ARR11(3)                                        <------MYB46(1)                        <---------MYB52(1)                                             <-------GAMYB                       ----------->GT1                                                <---------MYB46(3)                     <---------LBD16                                                <-----------HVH21                   <---------ARR14(2)                                               --------->LBD16                   --------->ARR14(2)                 ---------->ID1      <-----------GT1 <------MYB83       ----------->GT1 --------->LBD16          --------->ARR11(3)     --------->ARR14(2)<---------AtMYB61 ---YAB1           <-----------HVH21            <---------ARR11(3)    <---------MYB52(1)<---------MYB52(1)   gaaaacgagaggtcaaaaccatgtccggtaataagatctcgactcttcaagctcttgtcttcttcttgtaccggtttttcattctccgtcgttggtgtca  481000                                         <---------ATERF1(1)                                    --------->ANAC58        --------->MYB52(1)                -------                                    --------->ANAC46        ------>MYB83<----------DOF2       -------                                    --------->ANAC58    <---------ARR11(3)           <-----------HVH21                       ---------->DOF2  --------->RAP2.6(2) ------>MYB46(1)--------->YAB1   <------ZmHOX2a(1)   tcgtagccctaaacaaaaataccaaaaatgcccttctcacggcctccaccaatatcaagacctatcgaatcacactttgatattcaacgtcgaaggagct  481100                                                               --------->DAG2                                                    <------NtERF2           ------>ZmHOX2a(1)      <---------ATHB12 <---------MYB52(1)          --------->LBD16    <---------DAG2 -->GLK1(1)        <-----------GT1 <---------MYB46(3)   ----------->GT1  ---------->ID1        ------ -->At4g35610 <----------DOF2  <---------YAB1    <---------LBD16      <----------DOF2<----------DOF2   ctactcaaatcaaactctttattcccttacttcatggttgtggcattcgaagccggaggggtgataaggtcacttttcctcttagttctttatccattta  481200                                                                                    <---------GLK1(1)                                                                         <-----------------AGL1                       <----------DOF2                               <---------HSFB2a(1)                      <---------ANAC58                               --------->HSFB2a(1)                      <---------ANAC58                               --------->HSFC1(2)             --------->ANAC46                          ----------->GT1   ----------------->AGL1             --------->ANAC58                     <----------DOF2    <---------HSFC1(2)             --------->ANAC58                <---------At4g35610  ---------->DOF2   --------->GLK1(1) --->YAB1--------->At4g35610            <---------At4g35610  ---------->DOF2  --------->ALFIN1   taagcttgatgagctacgaaatgggcttgaagacgatggtgatgctgagcttctttggagttaaaaaggaaagcttccgagtggggaaatcagttttgcc  481300                 --------->ALFIN1               <-----------RAV1(1)                                                             <-----               ===============================RAV                                         --------->ATHB12              <---------ARR11(3)            ---------->DOF2                              --------->ICU4              --------->ARR11(3)   <---------TOE1(2)                                     <---------YAB1        <---------HSFC1(1)         --------->LBD16                                  --------->ANAC58        <---------HSFB2a(2)       <-----------RAV1(2)                               --------->ANAC58        --------->HSFB2a(2) --------->ARR11(3)       <------NtERF2            <---------At5g28300        --------->HSFC1(1)  <---------ARR11(3)    <------ZmHOX2a(1)          <-----------GT1<--------   taagtattttctagaagatgttgggctcgagatgttccaggttttgaaaagaggaggcaagagagttgctgtgagtgatttaccacaagttatgattgat  481400  Previous    Next  AGI:  At1g02390.1    Description:  ATGPAT2/GPAT2 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 2); acyltransferase. Identical to Probable glycerol-3-phosphate acyltransferase 2 (GPAT2) [Arabidopsis Thaliana] (GB:Q9FZ22); similar to ATGPAT3/GPAT3 (GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE 3), acyltransferase [Arabidopsis thaliana] (TAIR:AT4G01950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40143.1); contains InterPro domain Phospholipid/glycerol acyltransferase; (InterPro:IPR002123) Range:  from: 480852    to: 483292    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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