Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->YAB1  <----------DOF2                                 <---------AHL20(2)  <---------DAG2                                 --------->AHL20(2) ----------GT1                       <---------AHL20(2) -->ATHB12                          <---------AHL20(2)                             --------->YAB1 <-- ->ICU4        <-----------GT1      --------->AHL20(2)                    ----------->GT1        ---- --YAB1        --------->YAB1------->TEIL     <----------DOF2       <---------------AtSPL8  ---------   taaacttttttaaaaaatcacaatctctatgaaactttttaaattcttctttttaataagttgtatcaacaatgtacagaaaaaatcagaaaattagtat  474100              --------------->AGL15                                               <---------ARR11(3)              <---------------AGL15                                               --------->ARR11(3)    <-----------GT1                                                           ---------->DOF2   <-----------GT1                                                     ----------->GT1 -------AHL20(2)             --------->YAB1                           <---------TOE2(3) ----->AHL20(2)              <-----------GT1                       --------->ARR11(3)       --------- -->GT1<---------DAG2   --------->AHL20(2)      <-----------ARR10  <---------ARR11(3)--------->AtLEC2   aaaatttaaccttttaccaaaaaaaaaaaaatcacaatctctatgaaacaaatctcatctttcgaagaagataatgttacaaaagacattcaaacagaaa  474200                                                                                              -------                                                                                              <------                           --------->ATHB12                   --------->GLK1(2)               -------                           --------->YAB1   <---------At5g28300                              --------            <---------HSFB2a(2)            <-----------GT1   <---------GLK1(2)             <---------ICU4            --------->HSFB2a(2)           <---------YAB1  --------->YAB1                --------->ANAC55(2) -->GT1  ------>ZmHOX2a(1)<-------TEIL <---------YAB1 <---------AHL20(2)          <---------ZAT6<----   tatttgtaatccttctaaaaaactgacattcattgtaatttcttattactgtggatttattcatattctgtcgattagtgactagtgtttacataattat  474300                                                    ----------->GT1   <---------ANAC58                                <---------TOE2(3)   <---------ANAC58                             --------->ANAC46                             --------   <---------ANAC55(1)                       --------->ZAT18                                 --------   --------->ANAC55(2)                       --------->ZAT14                                 --------   --------->ANAC46                          <---------ZAT14                               <---------ALFIN1   <---------ANAC55(2)                       <---------ZAT18  --------->ANAC46            --------->ZAT14  <-------TEIL                               <-------TEIL     --------->ANAC58            <---------ZAT14 ->HAHB4             ----------->GT1     <---------------AtSPL8                           <---------ZAT18 ---ICU4        --------->AHL20(2)      ---------->DOF2       --------->ANAC58       <---------ZAT14 -->YAB1      --------->AHL20(1)      --------->ANAC46      --------->MYB52(1)       --------->ZAT14 ->ICU4       --------->AHL20(2)   <---------ZAT14--------->ZAT14                 <---------ZAT6 -----YAB1   --------->YAB1        --------->ZAT14---------->DOF2 ------>NtERF2   ----------->GT1 <--   gaaatacgtgactaaaaataatatagttaagagagactacacaaaagtacactaaagtaaaaaaacgacaccaagtcttatgtactgtaaactgcacgcc  474400                      --------->DAG2                     ---------->DOF2           <-----------HVH21                                    *TSS               <----------ID1                  <-----------TGA1                                   <--    <---------At4g35610                   --------->MYB46(3)                                   ======    --------->At4g35610                  ------>MYB83                                          ------ ->ANAC58      --------->ANAC46          -------->P                                        <---------YAB1 ->ANAC58--------->TOE2(3)     --------->TOE1(3)                     <------MYB46(1)   <---------ARR11(3) ->ANAC46--------->YAB1        --------->TOE2(3)                     <------MYB83      <---------GLK1(2) -------MYB52(1)----------->RAV1(1)      ------>MYB46(1)       ------>ZmHOX2a(1)       --------->ARR11(3)   gttttcagctatcttaaacgacataaagttttgccttaaaccctaccatcgtcactcactctgtcctcgataggtttagagaagaaatagattttgatcg  474500                                                                                           ----------                                                                                           --------->DEAR3(1)                                                                                          --------->ATERF1(1)                                                                                          <------NtERF2                                                                                         <---------ATERF1(1)                                                                                         ------>NtERF2                                                                                         <---------RAP2.3(1)                                                                                         <---------DEAR3(2)                                                                                        <---------At1g77200                                                                                        <---------DEAR3(1)                                                                                        --------->DEAR3(1)                                                                                       <------NtERF2                                                                                       --------->ATERF1(1)                                                                                      <-----------HVH21                                                                                      ------>NtERF2                                  <---------ANAC58                                    <---------ATERF1(1)                               <---------WOX13(1)                                     <---------SPL7                             --------->ATHB12                                        <---------ANAC46                          <---------At4g35610                                        --------->DEAR3(1)                       <---------MYB52(1)<---------ARR14(2)                        ------>NtERF2                      --------->LBD16    --------->ARR14(2)               --------->ARR14(2)                     --------->ANAC55(2) <-----------ARR10                <---------ARR14(2)------>NtERF2                     --------->ANAC46  --------->LBD16         <---------ANAC46    <---------ATERF1(1) ------>ZmHOX2a(1)   <---------ANAC55(2)<---------MYB52(1)  --------->ARR14(2)     --------->LBD16 ----ZmHOX2a(2)  <---------GLK1(1)<---------ANAC58          --------->GLK1(2)     <---------DEAR3(1) =======HOX2a_HOX2a <---------LBD16  <---------LBD16        <---------ARR14(2)   <---------LBD16    < >ZmHOX2a(2)    ------->TEIL<---------YAB1          <------NtERF2      ------->GAMYB <---------DEAR3(1)   atccttacaacaaaaatgaatttccgtaatctgattgcttccggttctcgcctcggcaagaggttctgtgcaacggtatttgctccggcgtcggcgactg  474600                                                                                <-----------TGA1                                                                               <---------ANAC46                                                                               <---------ANAC58                                                                               <---------ANAC58                                                                       <------NtERF2                                                                      --------->LBD16                                                                     <---------ANAC46                                                                     <---------DEAR3(1)                                                                    <---------At4g35610                                                                    <---------ABI4(1)                                                                    --------->At4g35610                                        <---------ANAC46            <---------LBD16                                <------NtERF2                       --------->ATERF1(1)                                --------->ATERF1(1)                 <------NtERF2                                --------->RAP2.3(1)                <---------DEAR4(2)                               <---------ATERF1(1)                 <---------RAP2.6(1)                               <---------ORA47(2)                  <---------RRTF1(1)                               ------>NtERF2                       <---------ATERF1(1)                               <---------DEAR4(2)                  ------>NtERF2<-----------HVH21                               <---------ERF1                      <---------RAP2.3(1)                               <---------RAP2.3(1)                 <---------ORA47(2)                              <---------RAP2.3(3)                  <---------ERF1                              <---------RAP2.3(2)                 <---------RAP2.3(2)                              --------->ATERF1(2)                 <---------RRTF1(3)                              <---------ATERF1(2)                 <---------RAP2.3(3)                              --------->DEAR3(1)                  <---------ATERF1(2)                              <---------DEAR3(1)                  <---------RRTF1(2)                              <---------ANAC46                    --------->ATERF1(2)                             <---------ABI4(1)                    --------->DEAR3(1)              <--                             <------NtERF2<------NtERF2         <---------ATERF1(1)         <-------GAMYB                             --------->ATERF1(1)                <---------RAP2.3(1)        <---------                             --------->RAP2.3(1)                --------->LBD16<---------bZIP60(1)---                            <---------ATERF1(1)                 ------>NtERF2  --------->bZIP60(1)---                            <---------RAP2.3(1)                <---------DEAR3(1)<------NtERF2 <-----        <---------HSFC1(2)  <---------DEAR4(2)                <---------LBD16  --------->TGA2(1)  <--        --------->HSFB2a(1)<---------DEAR3(1)  --------->HSFC1(2)<---------ABI4(1)   --------->ARR14(2) ->HVH21--------->HSFC1(2)<---------At4g35610  <---------HSFC1(2)--------->ATERF1(1) <---------GLK1(2) ------NtERF2             --------->At4g35610  --------->HSFB2a(1)<---------DEAR3(1) <---------ARR14(2)   gcatcgtcgaagcctctgtttcttctccagcggcggcgaatgtcgtcgaagcctctgtttcttctccggcggcggagaatggcgtcagaacctctgttgc  474700           <---------ANAC58           <---------ANAC58           <---------ANAC46         ------>NtERF2         <---------MYB46(3)         --------->ABI4(2)      <---------MYB46(3)      <---------DEAR3(2)     <---------DEAR3(1)                                          <------ZmHOX2a(1)    <---------------------WRI1                             <---------ANAC46   ------>NtERF2--------->ANAC58                           --------->TGA1a  --------->DEAR3(1)                                       ====================================bZIP_DOF  ----------->HVH21                                        --------->O2 -------At4g35610    --------->At4g35610                   <---------O2 --RAV1(1)<------NtERF2                                    <---------TGA1a ------>ZAT2    --------->ANAC46   --------->ANAC58     ----------->HVH21           ---------->DOF2 ------>At4g35610    <------NtERF2 --------->ANAC46     ----------->TGA1          --------->DOF5.7(2) ----At4g35610  --------->ANAC58   --------->ANAC58    <-----------HVH21        ----------->GT1 <---- -------ZAT2<----------DOF2 <---------------AtSPL8    <---------ZAT6        <------NtERF2      <-----   tgctccgacggtggcttcaaggcagcgagagttgtacaagaaactttctatgcttagtgtgacgggaggaacagtggcagagacgttaaatcagttcatc  474800                                                                          --------->ANAC58                                                                        <---------ALFIN1                                                                       <---------REM1(2)                                                                   --------->TOE2(3)                                                                   --------->AtMYB61                                                               --------->ETT(2)                                                               --------->WRKY12                           ------>ZmHOX2a(2)                   --------->WRKY38(1)            <-----------HVH21                                  <---------ETT(2)        <-----------GT1   <------ZmHOX2a(2)                    --------->DEAR3(1)    --------->PCF5   ----------->GT1       --------->ARR11(3)                  --------->LBD16         --------->PCF2 <---------ANAC46 ---------->DOF2                           <---------ANAC46 <----------DOF2    ----- -----ICU4 <---------ZAT6<---------ARR11(3)             <---------ARR14(2)--------->ANAC58      <---- ----YAB1<---------At5g28300  <----------DOF2          <----------TaMYB80 --------->ANAC46     <-----   atggagggtattactgtcagaaaagacgatctctttcgctgtgctaaaacccttcgcaaattccgtcgacctcaacacgcttttgaggtccctcttcata  474900           --------->ARR14(2)           --------->GLK1(2)           <---------ARR14(2)                                                  <----------DOF2        --------->ANAC58                             ----------->GT1          <---------ANAC58        --------->ANAC58                       <---------ARR11(3)         --------->ATERF1(1)    --------->ANAC58                  <---------RVE1(1)                  --------->ZAT2    --------->ANAC58                  <---------CCA1(1)            ---------->DOF2 ---->ARR11(3)        <---------TOE2(3)   <---------AHL20(2)   --------------->AGL15     <---------TOE1(3) -----ARR11(3)        <---------YAB1 <---------ARR11(3)        <---------------AGL15     <---------TOE2(3) ----CCA1(2)         <-----------GT1 --------->ARR11(3)     <-----------GT1   <---------ANAC58   tctcttaagcaagtatctgattttaacattgaaattggagatatttcattatctatggaaaattactcttaaaggggctggctttagatttagggtttag  475000  Previous    Next  AGI:  At1g02370.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G01990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40131.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 474500    to: 476511    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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