Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <----------DOF2   --------->O2                         <---------DAG2 ---->HVH21                        <---------ANAC58 >ANAC46                           <---------ANAC58 >O2                           <---------O2                    <---------ANAC58 -O2                           ====================bZIP_DOF    <---------ANAC58 >TGA1a                        --------->O2          <------MYB46(1)             --------->AtMYB61 -TGA1a <---------WOX13(1)     --------->TGA1a       <------MYB83  ----------->HVH21 -ANAC55(2)               ----------->HVH21         <---------AtMYB61    --------->ANAC58 >ANAC55(2)   --------->ALFIN1 <---------TGA1a   <-----------RAV1(1)     --------->ANAC58      <-----   tgccctcgtgatggacatggtgctatgtctgacacttgggtactttatattttgttggtgtcttagcgagcgacgaagcaaaaccacagccactacatag  469400                                    <-------TEIL                                   <-----------GT1                                  <---------ARR14(2)                        --------->AtMYB61                     ------->GAMYB--------->ARR14(2)                    --------->MYB46(3)                                                           ----              --------->ANAC58   --------->KAN4(1)                                               ----              --------->ANAC46   <----------TaMYB80                                             <----          <-----------HVH21     ---------->TaMYB80       <---------ALFIN1         ----------->GT1----          ------>ZmHOX2a(1)<---------LBD16             >>>>>>>>>>>>>>>>>LFY      <---------TOE2(3) ----TOE2(2)  --------->ANAC58  <---------KAN4(2)--------->REM1(1)            <---------YAB1   <-----   gtttccaatctccttcacgacaacgacctctcggaatatacgttccaatctacaacttcccactgttcaatctatttgatattatggaaaaactttgcat  469500                                             <------MYB46(1)                               <---------WOX13(1)                                             <------MYB83                                --------->ATHB12      <---------YAB1                       <--------P                                  <--------P  <---------GLK1(2)                       <-------GAMYB                                <---------WOX13(1) ---->ATHB1                              <---------MYB46(3)                          <---------MYB46(3) ----->ATHB51   --------->AHL20(1)      <---------AtMYB61                     <---------ARR14(2) -----YAB1 --------->AHL20(2)   <---------ALFIN1             --------->ANAC46 --------->ARR14(2) ----->ATHB12   <---------AHL20(1)   <---------MYB52(1)  <---------------AGL15------->TEIL<---------- -----DOF2 <---------AHL20(2)  --------->MYB46(3) --------->YAB1             <---------CCA1(2)<------   tattgattcttattttaatatttttctcttgttcccaccgttttggttggaatcatatactatacgaagtactatttgtgtatctagtggttgattgacg  469600                   <---------AHL20(2)                                                  <----------DOF2          <---------------AtSPL8                                             <----------DOF2          --------------->AtSPL8                                           <---------YAB1    <---------YAB1--------->AHL20(2) ------>ZmHOX2a(2)                    <---------ARR11(3)  <---------AHL20(2)      <---------At4g35610                           <---------MYB52(1) <---------TOE1(3) <---------YAB1   XXXXXXXXXXXXXXXXXXXX>MIR397A      <----------DOF2     --------->DOF5.7(2)<---------TOE2(3) --CBF  <-----------RAV1(1)        --------->ARR11(3)                  --------->TOE2(3)   --------->MYB59 ---TOE2(3)     --------->TOE2(3)  <---------ARR11(3)     <-----------GT1<XXXXXXXXXXXXXXXXXXXXMIR390A/B   atttttatttttgttgtacattaaatgcagcatctatgatctatctatcttcttctttttttgccaaatagaacgttatctttactgggcttttaggtta  469700                                             --------->WOX13(1)                                           ------------>CBF                                      --------->PCF2<---------ANAC46                             --------->AHL20(1)     ----------->GT1                             --------->AHL20(2)    <------ZmHOX2a(1)                             <---------AHL20(1) --------->YAB1                    --------->ANAC58              <-----------GT1<---------AHL20(2)<---------ATHB12                   --------->ANAC58       ----------->GT1     ------->TEIL    <---------ATHB12            --------->MYB52(1)        <---   gcccatgtaatgttattaacccaaatatgaatttattaagggcccatcaatgaggagtgaaacatgttagacaaaactgagaacaggcctctacttcttc  469800                                                   <------NtERF2                                                  <-----------HVH21                                                 --------->ALFIN1                                                <------NtERF2                                                --------->ATERF1(1)                                               <---------DEAR3(2)                                              <---------DEAR3(1)                                <----                                             <---------ABI4(1)                                  <----                                            --------->LBD16                                     <----          ------>ZmHOX2a(2)                <---------DEAR3(1)                               <--------          --------->ANAC58                --------->SPL7                                    <--------          --------->ANAC58               <---------MYB52(1)                                --------->MYB52(2)         <------ZmHOX2a(2)               <---------SPL1(1)            <---------ICU4     <---------MYB52(1) <---------ANAC58                       <-----------HVH21            <---------YAB1     <-------GAMYB <---------ANAC58                       <---------SPL7  ------>NtERF2--------->ICU4  ------>ZmHOX2a(1) -------DOF2   --------->AtLEC2     ------------------>SPL14       --------->YAB1<-----------HVH21  <   ttttcgtagcgatcgccatggaaatatcaaatgtctcttctccgtccggcggtgtcgcagccatttctctcataattcttctccgtcctcggttacttgc  469900                                                                                         <---------WRKY18(1)                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                     <------NtERF2                                                                                 <---------RRTF1(1)                                                                                 ------>NtERF2                                                                                 <---------ERF1                                                                                <---------DEAR3(1)                                                                                <---------ATERF1(2)                                                                                --------->ATERF1(2)                                                                                <---------RRTF1(3)                                                                                <---------RRTF1(2)                                                                                <---------RAP2.3(3)                                                                                <---------RAP2.6(2)                                                                                <---------RAP2.3(2)                                                                                <---------ANAC46                                                                                <---------bZIP60(1)                                                                                <---------O2                                                                              --------->REM1(2)                                                                             ----------->HVH21                                                                             ----------->TGA1                                                                         <---------At5g28300       --                                                                        <-----------GT1<---------WOX13(1)                            <--------P      ------>ZmHOX2a(2)      ----------->GT1<---------LBD16  ==                           <---------MYB52(1)                    <------ZmHOX2a(1)<------NtERF2  ----                           <-------GAMYB    ============================HOX2a_HOX2a<---------ANAC46<- -----ANAC46              --------->LBD16 <---------ARR11(3)   --------->ALFIN1--------->RAP2.6(3)--- -----ANAC58            <---------LBD16   --------->ARR14(2)  --------->ATERF1(1)<---------RAP2.3(1) -----ANAC58          <-----------GT1     <---------ARR14(2)  <------NtERF2<---------ANAC58   ------- -ANAC58          <---------MYB52(1)      --------->ARR11(3)--------->ALFIN1<-----------HVH21 <------ -ANAC58         <-------GAMYB    --------->WOX13(1)        <---------DEAR3(1)--------->MYB52(1)----- ---------YAB1  <-----------RAV1(1) <---------ATHB12       <---------LBD16 <---------ANAC58<---------WOX13(1)   ttatgattctactaatctctgttgtttccggttgatcaatcgtcgatcttctaaactcgaaggcggaggaggtattaccgtgacggcggattgactgatc  470000                           <------ZmHOX2a(1)           ------>ZmHOX2a(1)           <---------CCA1(2)                          <---------------AGL15     <---------ANAC46=======================================bZIP_DOF --------->At4g35610 --------->ANAC46                 --------------->AGL15 <---------At4g35610 --------->O2                    ----------------->AGL1 <---------LBD16     <---------ANAC55(2)             <-----------------AGL1 -------->CDC5       --------->ANAC58                ----------------->AG ==============================MYC_MYB              ---------->ID1 ----->TOE2(3)       <---------TGA1a             <---------DAG2 ----------RAV1(2)   --------->ANAC58            <----------DOF2 --->ZmHOX2a(1)      --------->TGA1a            <---------DAG2 -->ARR14(2)--------->ARR11(3)               <-----------GT1             --------->ARR14(2) ---ARR14(2)------->TEIL  ----------->GT1    ---------->ID1              <---------ARR14(2) ->ZmHOX2a(2)        <---------O2           <-----------GT1 <---------TOE2(3)                   <----   ctcagcggagtatgtatcttgacacgcgaggaaaaatgtttttttttttcccttttcctattgtggtttcgatcgaattcgcttaattcgattttgttac  470100                                                                                  <---------ZAT14                                                                                  --------->ZAT14                                                                         <---------At4g35610                                                                        --------->ARR14(2)                                                                        ------->TEIL       <---------AHL20(2)                                               <---------ARR14(2)    --------->TOE2(3)              --------->ANAC58                <---------ANAC58    ----------->GT1      <---------YAB1 --------->ICU4             <---------ANAC58   ----------->GT1    ------->TEIL --------->ANAC58                <---------ANAC46    <---------MYB46(3) -----ANAC55(2)     <<<<<<<<<EIN3---------->DOF2      --------->ANAC46 <---------CCA1(2) <---------ANAC46   atgaagcgttaaattgagccaatgtatatgatttcgaaagcaaaaattagttatctacagaacaaattgtcttgtatctgatagtttagtggtttgaaat  470200                                                           <---------ANAC58                                                           <---------ANAC58                                                           <---------ANAC46                                    <---------ANAC46    <---------MYB52(1)         <---------AtMYB61                            <---------ANAC58           <-------GAMYB    <---------HSFB2a(2)   ---------->DOF2          <---------ANAC58         ---------->ID1     --------->HSFB2a(2)   tcactaaaagagttttagtagaatgctctgtcttggtttagtggatttaagccttgtcgttgtttgcaagtttactagaagagttttggtagaagctctg  470300  Previous    Next  AGI:  At1g02350.1    Description:  protoporphyrinogen oxidase-related Range:  from: 469818    to: 470693    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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