Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                             --------->At4g35610                                           --------->ZAT14                                        ---------->DOF2                     --------->ANAC58                                    --------->YAB1                    ----------->RAV1(1)                             ------>ZmHOX2a(2)                   <---------ANAC58              <---------ANAC58     <---------ATHB12              <---------ANAC58              <---------ANAC58   --------->WOX13(1)            <---------ARR11(3)          --------->CCA1(2) <------ZmHOX2a(2)                  --------->ARR14(2)         <---------ARR14(2)<---------ARR11(3)                  --------->ARR11(3)         --------->ARR14(2)<---------ARR14(2)                  <---------ARR14(2)   <----------DOF2       ----------->ARR10   --------->ARR11(3)                  --------->GLK1(2)  ------>ZmHOX2a(1) ---------->DOF2           --------->ARR14(2)             ---------->DOF2   --------->ANAC58 ------>ZmHOX2a(1)   ttgtaaagagagatttgcttacatgttgggatcttcaatcaaaacagcagtctcttgagcaaaagtatcttgcaacacaagctcctctttctctccttca  463200                                                                                          <---------HSFB2a(2)                                                                                          --------->HSFB2a(2)                                                                   <---------MYB59    <---------GLK1(2)                                                          --------->TOE1(2)          <---------ZAT2                                                      ---------->DOF2------>MYB83    --------->At4g35610                                             --------->LBD16       --------->TOE2(3) <---------At4g35610                                            <---------ANAC46      --------->ANAC55(2)--------->ZAT2                                            --------->DEAR3(1)    <---------ANAC55(2)--------->HSFC1(2)                       <----------DOF2     <------NtERF2 <---------ZAT2              <---------HSFC1(2)                       <---------DAG2     <---------RAP2.3(1)   --------->GLK1(1)    --------->HSFB2a(1)                    <-----------GT1       ------>NtERF2  --------->ZAT2     ------>ZmHOX2a(1)           <---------ALFIN1             --------->ZAT18--------->DAG2------>MYB46(1)<---------TOE1(2)          <---------ZAT14    <---------At4g35610    --------->ARR11(3)  <-----------GT1 --------->At4g35610   gtttcagttttctccactggtttcacttttccgatgctagattgcgccgtagaagataaagctgggatacctaatttcctctctcgcagcttctgcaaaa  463300                                                                 <---------AHL20(2)                  <---------ARR14(2)                             --------->AHL20(2)                  --------->ARR14(2)                             --------->AHL20(1)                  --------->GLK1(2)                   --------->ANAC58                 --------->WOX13(1)                   --------->ANAC58             --------->ANAC58                        ------->GAMYB                                <--             --------->ANAC58                       <---------MYB111(2)                          <---             --------->ANAC46                       <---------MYB55(2)                           <---        ------>ZmHOX2a(1)                  --------->HSFB2a(1)   <---------AHL20(1)         ---------        ==========================HOX2a_HOX2a       --------->MYB46(3)         --------->YAB1--------    <---------ALFIN1                      ------->TEIL-------->P<---------AHL20(2)          <--------   <---------At4g35610     <------ZmHOX2a(2)<---------DAG2      --------->AHL20(2)          <--------   acttcacctcctctaacgccaatctgtagatcaaacaaaaatcgaaccttttcaacaacccatcaaataaattgaagaaaatcaaaaccctacagatttg  463400                                                 --------------------->WRI1                     -----                                                 <----------DOF2                         --------->ANAC58                                             <---------RAP2.3(2)                         --------->ANAC58                                             <---------RAP2.6(2)                     --------->ZAT2                                             <---------ANAC58                        --------->HSFC1(2) --------DOF2                                <---------ANAC58                   ------>ZmHOX2a(1) ------ANAC58                                <---------ANAC46                   --------->HSFB2a(2) ------ANAC58--------->WRKY12               --------->RAP2.6(3)                 <---------HSFB2a(2) >ARR14(2)   ----------->HVH21              <---------LBD16            <<<<<<<<<TBF1 <---------HSFC1(2) ->GLK1(1) --------->At4g35610     --------->At4g35610          <---------ARR11(3)   <---------ZAT2 -GLK1(2)  <---------At4g35610     ------>ZmHOX2a(1)            --------->ARR11(3)  <-----------ARR10 -ARR14(2) --------->ZAT2          <---------At4g35610      <---------ICU4   ------>ZmHOX2a(1)  -----   cttttcaatttagagctgaccttcgcttctcttcttcctctgaaattgcggctttgtttacatcattatcttcttcttcctcctcgaagctacgcttcct  463500                      ------>NtERF2                 <------NtERF2              <------NtERF2              --------->ATERF1(1)             --------->RAP2.6(2)             <---------ATERF1(1)                                                              <------             ------>NtERF2                                                                    -------            <---------ATERF1(2)                                                              <-------            --------->ATERF1(2)                                                        --------->MYB59            <---------DEAR3(1)              ---------->DOF2                  --------->ARR14(2)          <---------ATERF1(1)        --------->ARR14(2)                      <---------ARR14(2)------          <---------RAP2.3(1)        <---------GLK1(2)                ------>NtERF2<----------DOF2         <---------DEAR3(1)          <---------ARR14(2)              --------->DEAR3(1)<---------TOE1(3) ->ZmHOX2a(1)<---------RAP2.3(1)--------->MYB52(1)         --------->O2  ------>NtERF2 <---------TOE2(3) ---->LBD16<---------LBD16    <---------MYB52(2)           <---------O2 --------->DEAR3(1) <-------TEIL   gaaatttctcttcggcggcatcgcagccagaaactatcggatttttgaaagagctaatgcgacttgagacgacgacgacgataggcttttaggttgatct  463600                                                                                   <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(1)                            --------->ANAC58                                      <---------AHL20(2)                <---------At4g35610                                               <---------ARR11(3)                <------NtERF2                                                     --------->ARR11(3)                --------->At4g35610                                              --------->AHL20(2)               ------>NtERF2--------->ANAC58                                   --------->AHL20(2)               <---------DEAR3(2)                                            <---------AHL20(2)     <---------GLK1(2)  --------->YAB1                                       --------->AHL20(2) ---At4g35610 <---------DEAR3(1)               --------->ZAT18            <---------AHL20(2) -->At4g35610<---------MYB52(1)        <---------AHL20(2)                 --------->AHL20(2)        - --AGP1     *TSS<---------------------WRI1     <---------PCF2       --------->ANAC55(2)--------->AHL20(2) >ZmHOX2a(2)<-----------HVH21         --------->AHL20(2)            <---------ANAC55(2)<---------AHL20(2)   gaaaacagactctccgtcggctaaaatcacaagcgaaacatttaatatgggccctattagtaagcccattatgtattaaaaaaatatatttaaatgagat  463700                                                                <---------At4g35610                                                             <---------MYB52(1)                                                             --------->DOF5.7(2)                                                           --------->O2                                                           --------->TGA1a                                                           <---------O2                                                           --------->bZIP60(2)                                                           <---------TGA1a                                                           --------->ANAC58                                                           --------->ANAC58           <---------AHL20(1)                              --------->ANAC46           --------->AHL20(2)                         --------->PCF2 <---------YAB1           <---------AHL20(2)                      --------->HSFB2a(2)                           <--- <-----------GT1                         <-----------GT1 <---------ALFIN1                       ----- -------->AHL20(2)   ----------------->AGL1     <-----------GT1--------->MYB52(2)     ----------->GT1   aatttactaacattttatttagggccatattagttagcccattatacatttttccaggcccacgttagcttcttattcaacttaagaagtgtattaatcc  463800                                                --------->YAB1                                                --------->AHL20(2)                                          --------->ANAC58                                          --------->ANAC46                                          --------->ANAC58                   <------ZmHOX2a(1)  --------->ANAC58                           <----------DOF2                   =====================HOX2a_HOX2a                             <---------DAG2             --------->ARR11(3)       --------->ANAC46                       <---------ALFIN1         ---------->DOF2         ------>ZmHOX2a(2)                       --------->At5g28300     <---------------------WRI1<---------ARR11(3)               --------->ARR11(3) --------HVH21  <---------HSFB2a(2)   --------->AtLEC2          <---------ARR11(3)                  - ---->WOX13(1)  --------->HSFB2a(2)   --------->ANAC58--------->YAB1 --------->YAB1                 <   atcactggtccaaaagctctaggacgaacacttgatctccaagcaagcaataaaaatcatcaacaagataatcacagtaacacctttttattcaatacag  463900                                   --------->AHL20(1)                                   --------->AHL20(2)                                   <---------AHL20(1)                         <------------MYB.PH3(1)                       ------------>MYB.PH3(1)                                                      =                       --------->MYB52(1)                                                           =                       ------------>AtMYB77                                     <---------AHL20(2)  -           --------->ARR11(3)      <---------AHL20(2)                       --------->AHL20(2)     --           <---------ARR11(3)     --------->AHL20(2)                        <---------AHL20(2)     --        --------->AHL20(2) --------->At5g28300                    <----------DOF2          --------->ANAC58        <---------AHL20(2)----------->GT1                     <-----------GT1 <---------YAB1       -- ---------->GT1        <---------DOF5.7(2)            <---------AHL20(2)    --------->ATHB51   <----- ---------ZAT6        ----------->HVH21           <---------AHL20(2)   <---------YAB1      --------->ANAC58   tagtgttaaataaaatctttctaggtaacggttacattatattttcatgtttttattttttttttaaacttttatgaattattttttagtggcaagcctt  464000                                                                    --------->ARR14(2)                                                                    <---------ARR14(2)                                                                   <------NtERF2                                                                  <---------ATERF1(1)                                                                  ------>NtERF2                                                                 --------->RAP2.6(2)                                                                 <---------ATERF1(2)                                                                 <---------DEAR3(1)                                                                 <---------RAP2.6(2)              ------->GAMYB                                      --------->ATERF1(2)             --------->MYB46(3)                                 --------->RAP2.6(3)       ------>NtERF2            -------->P                                          <---------LBD16          --------->ANAC46           <-----------GT1                                  ---------->DOF2              --------->RAP2.6(2)     --------->TOE2(3)  ------>ZmHOX2a(2)                --------->LBD16  --------->RAP2.3(2) ==============================HOX2a_HOX2a               ------>NtERF2    --------->RAP2.6(2) =============================HOX2a_HOX2a               <---------ETT(1)--------->At4g35610 --------- ----->ZmHOX2a(1)      <------ZmHOX2a(2)                --------->HSFB2a(2)         <-------GAMYB ------->TOE2(3)      --------->ARR11(3)                <---------HSFB2a(2)    <---------ARR14(2) ------->TOE1(3)      <---------ARR11(3)                --------->ATERF1(2)------>NtERF2<---------LBD16 ------------------->WRI1 <---------ALFIN1              <---------ATERF1(2)--------->LBD16--------->LBD16 -----DOF2 --------->WOX13(1)    ---------->DOF2       <---------LBD16  ------>NtERF2<--------P------   tccttaatcttatcaaccatcttagatcccacttgaaaagtcttagttaacacatcttccggcaaagccggctctgccgcaaatagggttgccgcaacag  464100  Previous    Next  AGI:  At1g02330.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO40200.1); contains InterPro domain Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756) Range:  from: 462075    to: 463612    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02335.1    Description:  GL22 (GERMIN-LIKE PROTEIN SUBFAMILY 2 MEMBER 2 PRECURSOR.); manganese ion binding / metal ion binding / nutrient reservoir. Identical to Germin-like protein subfamily 2 member 2 precursor [Arabidopsis Thaliana] (GB:Q9FZ27;GB:Q67YR3); similar to GLP10 (GERMIN-LIKE PROTEIN 10), manganese ion binding / metal ion binding / nutrient reservoir [Arabidopsis thaliana] (TAIR:AT3G62020.1); similar to unknown [Populus trichocarpa] (GB:ABK93204.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cupin 1; (InterPro:IPR006045); contains InterPro domain Germin; (InterPro:IPR001929); contains InterPro domain Range:  from: 463855    to: 464924    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version