Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------AHL20(2)                         --------->ICU4                       <--------HAHB4                       <---------ICU4                       --------->YAB1                      --------->ICU4                      <---------YAB1                <---------AHL20(2)                --------->AHL20(2)            <---------AHL20(2)          <---------------AGL15          --------->TOE2(3)  --------->AHL20(2)          <----------DOF2<---------YAB1     --------->YAB1          --------------->AGL15            <---------YAB1    --------->ATHB12<---------ICU4       --------->YAB1   --------->ICU4   --------->YAB1  <---------YAB1 <---------ANAC58  --------->ICU4 ----------->GT1                                         <---------ARR14(2) <---------ANAC58--------->YAB1 <------------CBF                                          --------->ARR14(2) ---MYB52(2)--------->AHL20(2)<---------AHL20(2)                                 <---------HSFB2a(2)   atgccttgattactttaattaataatcatttttaaattgtgatttataatcaagttagacattacttcacaaatagtttgggcctggaaacgtataggcc  452900                                                          <-----------GT1                                                          <---------AHL20(2)                                                      --------->AHL20(2)                                                  <---------YAB1                                             ------>ZmHOX2a(1)                    <-----------GT1      --------->ARR14(2)                                <---------             ---------->DOF2             <---------ARR11(3) <---------ANAC58            <---------GLK1(1)            <---------AHL20(2)           --------->ARR11(3) --------->ANAC55(2)    ---------->DOF2---            --------->AHL20(2)        --------->YAB1 <---------YAB1               <---------AHL20(2)         --------->YAB1            --------->YAB1 <---------AHL20(2)              --------->AHL20(2)      --------->TOE2(3)          ----------->GT1  --------->ICU4               --------->YAB1    ----      <----------DOF2          <--------P<---------ARR14(2) <---------ANAC58  <---------YAB1 <-------   catgtaaactttaataaaagaatcaccttgcaggtaagtataatatcctgatattattatttacttgatagaatgggcctataataaaagaaatcaccat  453000                                                                                                  ---                                                                                                 <---                                                 --------->ICU4                                 <----                                  --------->ANAC58-------->HAHB4                            <------ZmHOX2a(2)                                  --------->ANAC58--------->YAB1                            ---------                            --------->ICU4     --------->YAB1             <---------ARR11(3)=========     --------->ATHB12    --------->AHL20(2)  <---------YAB1           --------->ANAC55(2)   =========     --------->YAB1    --------->ANAC58    --------->ATHB12           <---------ANAC58    ===========    <---------YAB1     ----------->GT1    --------->ICU4              <---------ANAC55(2) =========== --GT1                 <---------ANAC55(2)<---------YAB1              <---------ANAC58    <------ZmHOX2a(1) ------->DOF2          --------->ANAC58 --------->YAB1          --------->ICU4      --------->MYB111(1) ----->AHL20(2)  <---------ARR11(3)    --------->ICU4           <---------YAB1     <--------P ------- --YAB1         --------->YAB1--------->ARR11(3)<---------TOE2(3)<---------ICU4 --------->MYB59 -----   taaagaattataggcccatgatatcaagtaaatatcaagaaatgatgattaatgatcaagttagacatcattacttgatattttggtaagtaggatcaat  453100          ------>ZmHOX2a(2)         <------ZmHOX2a(2)        --------->ARR11(3)        <---------ARR11(3)        --------->ARR14(2)       <------ZmHOX2a(1)  <-----------HVH21 ------->GAMYB ------>MYB52(1) ------WRKY38(1)      --------->ARR11(3) -----ATHB12------>ZmHOX2a(1) --->CBF<---------ARR14(2) =============HOX2a_HOX2a <---------ANAC55(2)                    <----------DOF2                   <- ==================HOX2a_HOX2a                         --------->ANAC58                         <---- ===============HOX2a_HOX2a                            --------->ANAC58                         <---- ================HOX2a_HOX2a                         --------->CCA1(2)                          ----- -->WOX13(1)<----------DOF2                     ---------->DOF2  <---------DAG2          ----------->GT1 ---->MYB46(3)  ----------->GT1         <---------MYB52(1) <----------DOF2             ---------->DOF2   caacggtcaggatccttttagtaaaatcatgtgtcattttcagtttgtctaaaagataagcctttcactttctctctctgtcttattagaaaagaaaatt  453200                         <------------CBF                        <--------ATHB1                        --------->ATHB12                        -------->ATHB1                        <---------ICU4                        --------->YAB1                       --------->ICU4         <----------DOF2                       <---------ATHB12   --------->GLK1(1)                             <---------ANAC46 ----------GT1         <---------YAB1 <---------HSFB2a(2)                          <---------ICU4 -----------AtSPL3   --------->WOX13(1)   <---------GLK1(1)                       <---------YAB1 -----------AtSPL8  ------------>ATHB5--------->HSFB2a(2)                       --------->YAB1 ---------->AtSPL8 ------------>CBF  <---------LBD16                           <-------TEIL     <----   tgtaccgtttccaaagtctgagccaatcattgtgttgattctggaattctttgtgggaacgagaaatttgtacaagggagattcatcatggctgatagtt  453300                                                                            <---------ANAC58                                                                            --------->ANAC55(2)                                                                <-------TEIL<---------ANAC58      <--                                                            --------------->AtSPL8                <--                                                            <---------TOE1(2)               <--------                                           <-----------GT1  <---------------AtSPL8      ----------->GT1          <---------ZAT14      <---------ANAC58   ------>ZmHOX2a(1)         --------->YAB1 --------->AHL20(2) -----MYB46(3)                 <---------ANAC58  --------->TOE2(3)<----------DOF2      ----------->GT1   gttgtatcagacttcacttattagcctctgttttcttgctcttattttcatccttcaacttgcaggtactttaaactttcgtaatctgtgtgttaaaatt  453400        <------ZmHOX2a(2)                                                              --------->WOX13(1)       --------->ARR11(3)   --------->At4g35610       --------->WOX13(1)            <---------ARR11(1)     <XXXXXXXXXXXXXXXXXXXXMIR169G*                   --------->AHL20(2)          <---------ANAC58 -------ANAC58<---------MYB46(3)            <----------ID1    <----------DOF2    <---------ANAC58 -------ANAC58<-----------RAV1(1) ----------->GT1    <---------AHL20(2)         <-------------------- -YAB1 <---------ARR11(3)   <---------At4g35610     --------->AHL20(2)    <-----------GT1           -   gcttactaagatcgatttgttggactcttgagctacaagttaaaaaaaaacaaaataaatcaaactttgtgatttttttctctgcgtatcaatctaagac  453500                                                                                                   <-                <---------ARR14(2)                                    ----------->GT1              --              ------->TEIL                              <-----------GT1                            <- -WRI1     ----------->GT1   <---------YAB1     --------->ZAT14    <---------ZAT2      <-----------RAV1(2) ---------->HVH21   ----------->GT1             ---------->DOF2    <---------At4g35610 <---------LBD16   atatgaaggggaaatgtatatatggttttttgtaattgtttctatatcagtaaagttttaaacttttgaagctggtttatctcttaatctcagggtattg  453600               --------->ANAC46      <---------ARR11(3)     <---------ZAT14                                                   <-----      --------->GLK1(2)     <---------MYB59                  --------->ANAC46                <<<<<<<<      <-----------ARR10    <---------bZIP60(1)      ------>ZmHOX2a(2)                       <--------      --------->ARR11(3)   --------->bZIP60(1)    <---------ARR11(3)                    <----------DOF2 --------->LBD16       <---------MYB52(2)         --------->ARR11(3)                <---------CCA1(2) --------LBD16 --------->AtLEC2    <---------GLK1(2)--------->YAB1  <-----------GT1 ---------->ID1 ------->At4g35610  --------->ARR14(2)    <---------TOE1(3)  --------->ANAC58     <---------ANAC58 --------At4g35610  <---------ARR14(2)   <-----------RAV1(2) --------->ANAC58     <---------ANAC58   cagcggaaaatctttccaagcagaaactgacctcactgattcttcaggttttgatcttaatccacacaattatctgtattgttttcgtctcttttagatt  453700                                                                          --------->At4g35610                                                                     <------MYB46(1)                                                                     <------MYB83                                                                   <--------P                                                      <---------ARR14(2)  <---------At4g35610                                                      --------->GLK1(2)---------->DOF2--------->ATHB12     --------->TOE2(3)                            --------->YAB1  <-------GAMYB<----------DOF2 ----WOX13(1)     <----------DOF2              --------->WOX13(1)--------->MYB55(2)   --------->YAB1 <RAP2.2          <---------DAG2       <---------TOE2(3)         <---------MYB46(3)  <---------ATHB12 -TOE2(3) <---------YAB1             ---------->DOF2  --------->ARR14(2)  <---------ZAT2 ------>ZmHOX2a(2)   gcctaaacgttgatgatcaacttttgcagaatgagattgtaaaggaagtcaatgagaatccaaacgctggttggaaagctgctttcaatgatcggtttgc  453800  Previous    Next  AGI:  At1g02300.1    Description:  cathepsin B-like cysteine protease, putative. similar to cathepsin B-like cysteine protease, putative [Arabidopsis thaliana] (TAIR:AT1G02305.1); similar to Peptidase C1A, papain; Somatotropin hormone; Peptidase C1, propeptide [Medicago truncatula] (GB:ABD32839.1); contains InterPro domain Peptidase C1A, papain; (InterPro:IPR013128); contains InterPro domain Peptidase C1A, papain C-terminal; (InterPro:IPR000668); contains InterPro domain Peptidase, cysteine peptidase active site; (InterPro:IPR000169); contains InterPro domain Peptidase C1A, propeptide; (InterPro:IPR012599); contains InterPro domain Peptidase C1A, cathepsin B; (InterPro:IPR0156 Range:  from: 453288    to: 455463    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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