Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <------NtERF2                                                         <---------ANAC58                 <-----------GT1                         <---------ANAC58             <---------CCA1(1)                          --------->At4g35610             <---------RVE1(1)                          ----------->RAV1(2)            <---------ARR11(3)                  ------->GAMYB            --------->ARR11(3)                 --------->MYB46(3)                <---------YAB1        ------>ZmHOX2a(2)                     --------->At4g35610     <-------MYC3       <------ZmHOX2a(2)                     =======================RAV      --------->ARR11(3)      --------->AGP1                     <------NtERF2  <---------ZAT2------->MYC3      <---------ARR11(3)               xxxxxxxxxxxxxxxx>smallRNA(i)   ------->MYC2      <---------AGP1  <----------DOF2  --------->ETT(1) --------->ZAT2<-------MYC2--------->ATHB12      --------->ARR11(3)             <-----------HVH21  --------->STY1(2)    <---------ARR11(3)  ------>ZmHOX2a(1)<-----------GT1  <-----------RAV1(1) <---------STY1(2)<---------AtLEC2 -----------  =============HOX2a_HOX2a <----------DOF2   ----------->RAV1(1)<----------DOF2------>ZmHOX2a(2) ---P<---------CCA1(2)<---------DAG2================================RAV <-------TEIL<---------WOX13(1)   agtccttagatctagatattttcacttttctttcatttatgtcggagcaacagacactagctggcgcttcaacgtgcatgatcttgattggctagtaaat  418400              ------>MYB83              --------->MYB52(1)              ------>MYB46(1)             --------->MYB55(1)            <---------MYB59            <---------MYB46(2)                                                          --------->AHL20(2)            <---------MYB111(1)                                                    --------->LBD16 --           --------->ANAC55(2)                                                    <---------HSFB2a(2)   --------->YAB1        <---------ALFIN1                                      --------->ARR11(3)  --  <---------ATHB12 ------->MYC3                                             --------->AHL20(2)------- --------->ANAC46  <-------MYC3                 --------->ATHB12            --------->YAB1   -------- --------->ANAC58  <-------MYC2              <---------------AGL15         <---------ATHB12 --------- --------->ANAC58  ------->MYC2   --------->ATHB12  ----------->GT1  <----------DOF2    <---------AHL20(2) >GT1      <---------ANAC55(2)   <-------TEIL<----------DOF2    <---------MYB52(1)--------->HSFB2a(2)   tccaagcatcaatacctaacacatgcccaacttggttcattagtattctttcattggtaaaatacccttacctttcaataatatccagaaataaatatat  418500                            --------->ANAC58                     <---------ARR14(2)                    <---------GLK1(1)                                                               <         --------->MYB46(3) --------->ANAC58 --------->YAB1                   --------->ZAT2        -      --------->WOX13(1) ------>ZmHOX2a(1)<---------bZIP60(1)                 <---------At4g35610  <-     --------->MYB46(3) --------->TOE2(3) <---------GLK1(1)            --------->At5g28300        <-- ------->ANAC58  <---------ZAT18          --------->bZIP60(1)         ----------->GT1             --- ------->ANAC58  --------->ABI4(2)   --------->CCA1(2)               ----------->GT1             <--- -->CCA1(2)      <-------TEIL       <---------ARR14(2)            --------->ALFIN1       <---------YAB1 ->AHL20(1)-------->P--------->ARR14(2)<---------YAB1          --------->MYB55(2)        --------->ICU4 >AHL20(2) --------->MYB52(1)       --------->ARR14(2)        --------->ALFIN1--------->At4g35610====   gaagccatccatcaaccggtgcatttcctcaaggcatggatatgatatcagaacatcgatgaaggtgggagggggtaattagctgagtgtcataaatgag  418600                                                                                              <------                                                                                             <-------                                                                                             <-------                                                           --------->ANAC46                  --------                                                       --------->AtMYB61                     --------                                                      --------->MYB46(3)                     --------                                                     ------>NtERF2                           --------                                                    <---------ALFIN1                         <-------                                                   <------NtERF2                             <-------                                                  --------->TCP15(2)                         <-------                                                 <---------TCP20                             --------           <------ZmHOX2a(2)                     --------->PCF2                             <--------          <---------ARR11(3)                =====================RAV                      <---------ARR14(2)          --------->ARR11(3)                --------->ZAT2 --------->ANAC58             <---------MYB46(3)         <---------GLK1(1)                  <---------At4g35610                         <------MYB83     --------->ALFIN1                       --------->At4g35610                         --------->MYB55(2)    ------->MYC3                            ----------->RAV1(2)                         <------MYB46(1)    <-------MYC3                            <---------ZAT2 --------->ANAC58            --------->ALFIN1 -------TEIL                         <------MYB46(1)--------->ANAC46             --------->CCA1(2) ----->ZmHOX2a(2)                    <------MYB83<---------TCP16(1)             <---------ARR14(2) -----ZmHOX2a(2)                    --------->MYB59--------->MYB46(3)           --------------------- -------ARR14(2)                    <---------AtMYB61----------->RAV1(1)        --------->ARR14(2) ------>ARR14(2)         --------------->AtSPL3  --------->PCF5               ----------->ARR10------ ---ZmHOX2a(1)           <---------------AtSPL8<---------ATERF1(1)       <---------ANAC46<-------GAMYB =================HOX2a_HOX2a    --------->ATHB12<---------TCP15(1)   --------->ALFIN1 <---------AtMYB61   gatccatgtggagatcatcgaatggtagtagtacatgtttggtcttagctggccccaccacaaggaattggactggtgggaagataggggtggttacgtc  418700      --------->ARR11(3)      <---------ARR14(2)      <---------ARR11(3)      --------->ARR14(2)     <---------CCA1(2) -----TGA1 --bZIP60(1) --TGA2(1) ->bZIP60(1) ->TGA2(1) ->ANAC58            ----------->GT1                                                          ------- ->ANAC58         <---------TOE2(3)                 <---------ANAC58                         -------- --ANAC58    --------->WOX13(1)                     <---------ANAC58                --------->bZIP60(1) --ANAC58  ------------>CBF                 <---------AHL20(2)                      --------->TGA2(1) --ANAC55(2)============================================MADS_MADS                   <---------bZIP60(1) ->ANAC55(2)<---------------AGL15       <---------------AGL15                       --------->ANAC58 ---STF1  -------->P<------ZmHOX2a(1)   --------------->AGL15                       --------->ANAC58 -->TaNAC69(2) <---------ATHB12 <-----------GT1   ------->TEIL                      <---------TGA2(1) --->TGA2(2)--------------->AGL15      ----------------->AGL3      *TSS          ----------->TGA1 <--   attccacatatctaccaattaaggagtttaatataaaccttgctatataatgtaccttggctcacaagagttgaagagacacagtgacgacacaaacata  418800                                                                            --------->ZAT18      ----                                    ------>ZmHOX2a(1)             <---------HSFC1(2)           ======         --------->At5g28300  <------ZmHOX2a(1)                   --------->HSFC1(2)    <---------ANAC58    ----------->HVH21      <---------LBD16              --------->ANAC58    <-------TEIL<---------ANAC58 -->AHL20(1)       ----------->RAV1(1)   --------->ATHB12   <---------LBD16 --------->ZAT14    <----- ->YAB1 ----------->GT1    <-----------RAV1(2)          --------->ANAC58    <---------ZAT18    ------ ---------GT1      ====================RAV            <---------ALFIN1      <---------ZAT14 ---------   ttacattcgacggtataatggccacaaaaccaggagtcctcaccgattggccttggacacccctcggaagtttcaaggtgcactctgttttcttgtcctt  418900                  --------->ICU4                 <---------ANAC58              <-------MYC3              ------->MYC3              ------->MYC2             <---------MYB52(1)              <-------MYC2           <---------ANAC58   <---------AHL20(2)       --------->ARR14(2)   --------->AHL20(2)    ------>ZmHOX2a(2)  --------->AHL20(2) <---------YAB1  <---------ANAC55(2) ----->AHL20(2)  <---------ANAC58    <---------ANAC58 ===============================HOX2a_HOX2a -----DOF2   <---------ANAC58        --------->ANAC55(2)                                    --------- >ZmHOX2a(1) <---------ANAC58     <---------MYB52(1)       <---------ANAC58         <-------TEIL ->ID1       >>>>>>>>CAMTA3 <---------ARR14(2)             <---------ANAC58    ---------->DOF2   taaatttaaaaaaacgcgtgcttatgatcgaatcccgttacgttactgatatatatgtttttcttgacattgaaacaatacaaaagtacatcgtaatagc  419000                                                                   <---------ANAC46                                                                   <---------ANAC58                                                                   <---------ANAC58                                                            <---------MYB52(1)                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                      <---------GLK1(1)                                                      --------->GLK1(1)                                          --------->LBD16<---------LBD16                            -                                        ------>ZmHOX2a(2)<---------ANAC46                          --                                      --------->ARR11(3)<---------LBD16                            <-                                  <---------At4g35610--------->ARR14(2)                            --                                  --------->At4g35610<---------ARR14(2)                            <-    --------->At4g35610      ----------->HVH21       <---------ARR11(3)                       ------- ->DOF2             <-------TEIL<-----------RAV1(2)  --------->ARR11(3)                       <------   accatgggctgtccatagcacatacaggtttgtgacagatgatccagagaagagggatctcgggtacttccttgtgttcccattcttgctcttcagaatt  419100                           ----------->GT1            --------->ANAC58                       <-----------HVH21    <---------HSFB2a(2)                 ------>ZmHOX2a(2)          --------->HSFB2a(2) -------->ANAC46 ================================HOX2a_HOX2a ------->ZAT14  --------->GLK1(1)          <---------LBD16      <---------REM1(2)        <---------ETT(2) --------ZAT18  <---------GLK1(1)         ------>ZmHOX2a(1)   --------->ETT(2)           --------->ETT(2) ------->ZAT18 <---------ARR11(3)         <---------LBD16------->TEIL                --------->MYB59 --------ZAT14 <---------AGP1<---------MYB52(1)     --------->CCA1(2)               --------->YAB1 -->GLK1(1)    --------->ARR11(3)    --------->ANAC46 --------->ANAC58             <---------ATHB12 ---GLK1(1)   <---------CCA1(2) <---------YAB1 ---------->DOF2<---------ETT(2)   --------->WOX13(1)   ctgcacaaccaggtttggatctctctgtcccgttactatacgtcctcgggaaagagacgcatcgtcgacaagggaatcgacttcaatcaggtcgacaggg  419200                                           --------->TGA1a                                           <---------O2                                    <---------ANAC58                                    <---------ANAC58             ========================================bZIP_DOF             <----------DOF2        <---------ANAC46         --------->ZAT18         --------->TOE2(2)         <---------ZAT18        ----------->RAV1(2)     <-----------RAV1(1)       --------->MYB52(1)    --------->ANAC55(2)  <---------GLK1(1)   -------->P<---------DAG2    ======================MYC_MYB       <---------MYB52(2)   ----------->RAV1(2)         -------->P  --------->O2       --------->ANAC58          --------->ANAC46   ==================================================MYC_MYB  --------->ANAC58      --------->CCA1(2)   ------>MYB46(1)           <---------MYB46(2)   <---------ARR14(2)      --------->GLK1(1)         <   ------>MYB83              <---------MYB111(2)  --------->ARR14(2)  <---------TOE2(3)<---------LBD16  --------->MYB52(1)       <-----------GT1 <---------TGA1a    --------->ANAC46 ------>ZmHOX2a(1) <---   agaccaactggtgcgcttttctaaatttttaactacctgcgtgcctcgtgagtatatgtaatcaacgtaactaatgaaatcctgatatatgcgcagggat  419300  Previous    Next  AGI:  At1g02205.1    Description:  CER1 (ECERIFERUM 1). similar to CER1 protein, putative [Arabidopsis thaliana] (TAIR:AT1G02190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17291.1); contains InterPro domain Sterol desaturase; (InterPro:IPR006088) Range:  from: 418767    to: 422437    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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