Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------TGA1a                                  <---------ANAC46                          ----------->RAV1(2)                         ------->TEIL                                                              <-         --------->ARR14(2)       ===================================bZIP_DOF                      <-         <---------ARR14(2)     <---------ZAT14                                                    <-      <---------ANAC58<---------ANAC55(2)                   --------->ANAC58                <--------      <---------ANAC58--------->ANAC58                      --------->ANAC58         <---------ARR11(3)  <---------GLK1(1)   --------->ANAC58                    ---------->DOF2    --------->AHL20(2)   --- --------->ALFIN1     --------->ANAC55(2)            ----------->GT1        --------->AHL20(2) <----- ------ZmHOX2a(1)     --------->ANAC46        --------------->AGL15   ----------->GT1--------->ARR11(3) --->ALFIN1         <-----------GT1           <---------------AGL15--------->YAB1---------->DOF2<----   gaggagttgcgaaaccgaaatttcacgtacctggtgaagtgagtatttcatcatatagtagaaagcaattcatagtaaataaaaaaagataccactggtg  408200         --------->ZAT6       <-----------GT1      ----------->HVH21    --------->ANAC55(2)                                                                             <    ----------->GT1            <---------At4g35610                                                  -    --------->ANAC55(1)     --------->ZAT14                                                        <-    <---------ANAC55(2)  <------MYB46(1)                                                           <- --------WRKY45          <------MYB83                                                             --- --------WRKY12       <---------ANAC58                                                            <-- --------WRKY38(1)    <---------ANAC58                                                         ------ ---RAV1(1)          --------->ATHB12                 --------->CCA1(2)                        <----- ------>WRKY18(1)   <---------YAB1        ------>ZmHOX2a(1)   <---------ANAC58                 ------ ----AtMYB61 --------->ZAT14<---------ZAT14        ----------->GT1  <---------AHL20(2)         <----- -----MYB46(3)      --------->ICU4  --------->HSFB2a(1)       <---------ANAC58   <----------DOF2 ----   gtcaacatgtaacactgttgtcatgcttggtgcagcgagcattcctctgtagatggatacaagtgcttattttatgaagaaggctttgagagacttgagc  408300  --------->DEAR3(1)  <---------ANAC46 ------>NtERF2 <------NtERF2 ---------RAP2.3(1) ----->NtERF2                               <---------PCF2 --------DEAR3(1)                        --------->ALFIN1 --------ANAC46                          --------->ATERF1(1) ------>At4g35610                        <------NtERF2 -------LBD16                          <---------ANAC46 --->At4g35610                      <---------MYB46(3) ----ZAT2                           <---------DEAR3(1) --->ZAT2                          --------->ALFIN1                  <---------AtLEC2 ----At4g35610        <---------ANAC58 <---------ANAC58             <-------TEIL ----->ALFIN1         <---------ANAC58 <---------ANAC58   --------->YAB1                   --------->ICU4   tgcggcgaggtttccctcccattgtcttggtaaatcggtgggcgtggggctagtatttcatcaaaataggtgcatggaatgtaatgtaatgtaatgttga  408400                                                      ------>ZmHOX2a(1)                                                      <----------DOF2                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                                  <---------ARR11(3)             <------MYB46(1)                                                  --------->ARR14(2)             <---------ANAC55(2)                                                  --------->ARR11(3)             <------MYB83                                                  <---------ARR14(2)             --------->ANAC55(2)                XXXXXXXXXXXXXXXXXXXX>MIR399D      --------->ARR14(3)            --------->MYB59                ---------->DOF2     <---------At4g35610                         --------->MYB46(2)            --------->ANAC58        --------->At4g35610   --------->YAB1        --------->MYB111(1)            --------->ANAC58     --------->LBD16  <---------ARR14(3)          <---------MYB52(1)            <----------ID1      --------->LBD16  <---------HSFB2a(1)  <---------ANAC58   ------>ZmHOX2a(1)          ---------->DOF2      <---------LBD16   --------->HSFB2a(1)  <---------ANAC46   <-----------   ----------->GT1            <---------LBD16   ----------->ARR10     <---------ANAC58  --------->TOE1(2)   attgcaggtaaaaaaagccaaagtatacttgcaccgggagatgaagaaggaagatccttttcataagaaatggcctggatgttaggtaatcctacaaata  408500                                                                          <-----------GT1                                                                     <---------ANAC58                                                                     <---------ANAC46                                                                 --------->GLK1(1)                                                                 <---------At4g35610                                                                 <---------GLK1(1)                                             --------->ICU4   ------->GAMYB                                 ------>ZmHOX2a(1)         --------->MYB52(1)                                --------->TOE2(3)    ----------->GT1 <---------ANAC58 ----AGL15            <---------REM1(1)  <------ZmHOX2a(1)--------->MYB46(3)   gagacaatgttttgggtcgatgtaatgtagcattcctcagagaggacatgatgtaatgtaacaacggagatgcttgttactgacttactgtaatggattc  408600                                             <-----------HVH21                                             <-----------TGA1                                            --------->bZIP60(2)                                            --------->ANAC46                         <----------DOF2  <---------ANAC58                      *TSS<----------DOF2 <---------ANAC58                    --------->At4g35610   <---------ANAC55(1)               --------->YAB1             --------->ANAC55(2)          <---------AHL20(2)             --------->ANAC58             <---------ANAC46             --------->AHL20(2)             --------->ANAC58             <---------ANAC55(2)         --------->AHL20(2)   --------->ANAC46         <---------HSFB2a(2)            <-----------GT1             <----------DOF2      <-----------GT1         --------->HSFB2a(2)     <----------DOF2 <---------YAB1     ------>ZmHOX2a(1)   --------->ARR14(2)    <-------TEIL  --------->ATHB12      --------->CCA1(2)        ---------->ID1  <-----------GT1   <-   aacaaattcatccagaagcatcatcggcctttgggctttgagttacgcgtcacaattgaatcaattggtccttttaattagttttaccaatatacccctc  408700                                                                                                   --                                                                                                   <-                                                                                              -------                                                                                             --------                                                                                             <------NtERF2                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                           <---------DEAR3(1)                                                                                          --------->ATERF1(1)                                                                                          <---------ABI4(1)                                                                                          <------NtERF2                                                                                         <---------RAP2.3(1)                                                                                         <---------ORA47(2)                                                                                         ------>NtERF2                                                                                         <---------ERF1                                                                                         <---------DEAR4(2)                                                                                         <---------ATERF1(1)                                                                                         <---------RRTF1(1)                                                                                        <---------RRTF1(2)                                                                                        <---------RRTF1(3)                               --------->YAB1                                           <---------DEAR3(1)                               <---------ICU4                                           <---------DREB2C(2)                               --------->ATHB12                                         <---------ATERF1(2)                              --------->ICU4                                            --------->ALFIN1                              <---------ATHB12                                          --------->ATERF1(2)             --------------->AGL15                              --------->MYB52(1)      <---------RAP2.3(2)             <---------------AGL15                       --------->MYB52(1)             <---------RAP2.3(3)            <-----------------AGL1                       ------>MYB83                  --------->ATERF1(1)            <-----------------AG                         ------>MYB46(1)     --------->HSFC1(2)<-----     <-----------GT1      --------->AHL20(2)            --------->MYB55(1)   <---------HSFC1(2)------ <----------DOF2     <------ZmHOX2a(1)                 <---------MYB59    --------->CCA1(2)--------->ALFIN1 --------MYB52(1)  <---------TOE2(3)             --------->ANAC46 <----------ID1    <-----------RAV1(2)   cgtcttttcccccttctcgtttaggaaaaaaaatcattagcttcgacttatccgaaacctaacgagtaacgacgagagatgcttcttcaggcggcggtgc  408800                                                                  --------->ATERF1(1)                                                                <---------ANAC58                                                                <---------ANAC58                                                             ------>ZmHOX2a(1)                                                           ----------->RAV1(2)                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                                                        --------->GLK1(1)                                                        <---------GLK1(1)                                                       --------->ARR14(3)                                                       --------->ARR11(3)                                                       <---------ARR11(3)       <---------HSFB2a(1)                             <---------AGP1       --------->HSFB2a(1)                             <---------ARR14(2)  --------->ANAC58                                     --------->ARR14(2)  --------->ANAC58                                     <---------ARR14(3) ------->ARR14(2)               ===============================HOX2a_HOX2a                        <-- --------ARR14(2)            ------>NtERF2      <---------At4g35610       <---------At4g35610     <-- -->ALFIN1                  --------->DEAR3(1)  --------->At4g35610       <---------ZAT2          --- ->ATERF1(1)               XXXXXXXXXXXXXXXXXXXX>MIR773 <-----------ARR10  --------->At4g35610  <----- -ORA47(2)                ------>NtERF2      ===================HOX2a_HOX2a        --------->HSFB2a(2) -MYB46(3)                <---------ATERF1(1)==================HOX2a_HOX2a--------->ZAT2     -------- -DEAR3(2)                --------->LBD16    ------>ZmHOX2a(1)<-----------HVH21    <---------HSFB2a(2) -DEAR4(2)        <---------ANAC58    --------->TGA1a <---------At4g35610--------->ARR14(2)  -------- -ATERF1(1)       <---------ANAC58    --------->O2    <---------CCA1(2)--------->LBD16       -------- ----ZAT14<<<<<<<<<<<<<<<<<LFY  ------>ZmHOX2a(1)  <---------At4g35610--------->ANAC46      --------- --->ZAT14>>>>>>>>>>>>>>>>>LFY  ================================HOX2a_HOX2a  --------->At4g35610 ----   agaaccgcaatgttccactggcttcttccgcctcctactctcgtctccttcgctgcagatctcctgtcgtctccgtagctgctctctcgaagaagacggc  408900        <---------At4g35610        --------->ZAT18      <---------ZAT18  <---------ATHB12 -------At4g35610 ----NtERF2                      --------->ANAC58 ------>At4g35610                --------->ANAC46 -NtERF2--------->At4g35610      --------->ANAC58 ->ANAC46           <---------TOE2(2)     --------->ZAT14 ->ANAC58           --------->LBD16       <---------ZAT14                                         --- ->ANAC58           <---------TOE1(2)     <---------ZAT18                                       <---- >RAP2.6(3) <---------ALFIN1    --------->SPL7                                             --------->ARR11(3) ----->RAP2.6(2)   <-----------RAV1(2)<---------DEAR3(1)          <---------ZAT14          <---------ARR11(3)   agcaatcgtgtgctccatctcccaggtttatggctacggcacggtggactacgagagaaggccgattgtccagtggaatgccatctacaagaagatttcg  409000                                                             --------->ANAC58                                                             --------->ANAC58        <---------MYB46(3)                                                         --------->RAP2.6(2)         <---------DEAR3(2)                                                         --------->ANAC58           <---------ANAC58                                                         --------->ANAC58           <---------ANAC58                                                        --------->SPL7              --------->ETT(1)                                                       <------NtERF2                <---------ANAC46                                                      ------>NtERF2               <-----------HVH21                        --------->ZAT2                <---------SPL7             <-----------RAV1(1)                      <------NtERF2                   <---------ATERF1(1)        ----------->HVH21                     <---------At4g35610             --------->DEAR3(1)      --------->ZAT2       ---                    <---------DEAR3(1)               <---------ATERF1(2)     --------->GLK1(1)    ---              <---------ZAT2 <---------ANAC58        <---------RAP2.6(2)     <---------At4g35610  ---              --------->ZAT2 <---------ANAC58        --------->ATERF1(2)     --------->At4g35610  <--       --------->ANAC58 <---------At4g35610         --------->RAP2.6(3)      <---------ZAT2       ---       --------->ANAC58 --------->At4g35610     ---------->DOF2              <---------GLK1(1)    <-- -------->HVH21<---------ANAC58           --------->ALFIN1<------NtERF2 --------->ALFIN1         <--- -----At4g35610<---------ANAC58        --------->ATHB12--------->ATERF1(1) <---------PCF2 <----------   ctgatggagaagccagagcttggcgctgcttccgtcttgaatcagtgggagaaagccggccgcaagcttaccaagtgggagctctgtcgggtcgtcaagg  409100  Previous    Next  AGI:  At1g02145.1    Description:  similar to mannosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G14850.2); similar to mannosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G14850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70510.1); contains InterPro domain Alg9-like mannosyltransferase (InterPro:IPR005599) Range:  from: 404600    to: 408614    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g02150.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT4G02820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70507.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 408622    to: 410611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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