Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                <---------ANAC46         --------->YAB1        <---------YAB1 <---------WOX13(1)               ------>NtERF2                                                    -- ---->TOE2(3) <---------ANAC58   --------->LBD16                                                  --- ---------->AGL15           ---------->DOF2                                              <---------LBD16 ---->TOE1(3) <---------ANAC58 <---------LBD16           <---------ARR14(2)    <------ZmHOX2a(1)  <-- -----------AGL15     <---------WRKY18(1)           --------->ANAC58        --------->DAG2        --- ----------->AGL2    --------->WRKY38(1)            --------->ANAC58 ----------->GT1     <---------HSFB2a(2) ------------AG     <---------WOX13(1)   <-----------GT1 --------->ARR14(2)---------->DOF2      -----   ctaattggctattatagcgtcgattgaccaaaacgcggacaattaacaagagagaagcaaatcggaagagagagagaaaaaggacctcgctctcggagac  404200                          <---------DEAR3(1)                         --------->ATERF1(1)                         <------NtERF2                        <---------MYB46(3)                        --------->LBD16                        ------>NtERF2                                                       <--------                       --------->ALFIN1                                                     ---------            <---------ANAC58                                                                ---------            <---------ANAC58                                                               <--------- --------->ANAC58      <---------ANAC46                                               --------->MYB52(1) --------->ANAC58      <---------DEAR3(1)          --------->YAB1                    ----------->HVH21 ------->CCA1(2)      <---------LBD16          --------->LBD16                     <---------ANAC46 ------>ARR11(1)    --------->ANAC46          <---------ANAC58                     <---------ANAC58 -------ARR14(2)    <---------DEAR3(1)        <---------ANAC46                     <---------ANAC58 ------>ARR14(2)    --------->ANAC58          <---------ANAC58               --------->ATHB12   <---- ------>ARR10       --------->ANAC58         <---------LBD16              <---------ZAT6 ------->GAMYB   gatacgcttgcattccttgagcacggcgggggtgagaaatacctccttgcggataatagtatcgttcttgtagttagagttattggcgtaacggagctta  404300                                                                                             ------>NtERF2                                                                                             <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                     ----------->RAV1(1)                    ------>NtERF2                                                     ========================RAV          --------->At4g35610   ------>ZmHOX2a(1)                                 <---------DDF1                       <---------LBD16 -At4g35610                                     ----------->HVH21                         --------->LBD16 >ZAT2                                 <-----------GT1           <-----------RAV1(2)    <---------LBD16 >At4g35610          --------->LBD16 <<<<<<<<<SARD1--------->DEAR3(2)          <---------MYB52(1) --ARR10--------->ZAT14<------ZmHOX2a(1)    <----------DOF2  <-----------ARR10<-----------HVH21    <- -----At5g28300     <---------LBD16  <<<<<<<<<CBP60g--------->DREB2C(2)  <---------GLK1(1)<---------At4g35610   ccgtcctctctaaactcgaactccaggaactcgtgtccaaatttccctttgtgaccgacatagtatctcaggtagaactccgtcgcttcttccgcggcca  404400                                                                                ----------->GT1                                                                              ---------->DOF2                                                                          --------->ANAC58                                                                          --------->LBD16                                                                          --------->ANAC58                                                                          --------->ANAC46                            <------ZmHOX2a(2)           *TSS             <---------LBD16                      --------->HSFB2a(2)         <----------DOF2        <------NtERF2      <----------DOF2 <---------HSFB2a(2)   --------->LBD16          <---------SPL7 >RAP2.3(2)       <----------DOF2          <---------ANAC58          <-----------HVH21 >DEAR3(1)    <----------DOF2              <---------ANAC58 <----------DOF2--------->LBD16 >RAP2.6(2)<-----------GT1  =============================HOX2a_HOX2a<---------ANAC58   --------->DAG2 -----------------------ANAC81     <-----------GT1------>ZmHOX2a(1) <---------ANAC58 ---------->DOF2<   tgccttctctttttttctttctttctcgagatcgagattacctctccgtgtcctttgcccttctttaagtccgtccccgcaaaagaaaaaaggtaatggg  404500                                                                                         --------->ZAT2                                                                                       --------->LBD16                                                                                      <---------LBD16                                                                                     <---------LBD16                                                                                   ------->TEIL                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                      ---------->DOF2                             <---------CCA1(2) *TSS                                 --------->DAG2                             <---------ANAC58      <--    <------------CBF            ---------->DOF2                             <---------ANAC46      --- --------->ANAC55(2)         --------->ANAC46                               <---------ANAC58------>NtERF2 -----------------AGL1   <-----------GT1                <-----------GT1 <------------CBF <---------ZAT2   cttacatattgggccagaacccatttgtaacccgaaaagttaaggcccagttttagtttttctgtttccatcgaaattgtgtgtgtatccgggctgcctg  404600            --------->ARR14(2)            <---------ARR14(2)                                                                 ------          --------->ANAC46                                                                     <-----          --------->LBD16                                                                     ------>NtERF2         --------->LBD16         --------->ARR14(2)                                          <-------        <---------LBD16          <---------ARR14(2)                                          <-------     <---------ARR14(2)          <---------GLK1(2)                                 ---------->ID1     --------->ARR14(2)      <------NtERF2                                    <---------MYB52(1)    <---------GLK1(2)       ------>NtERF2                          <------------------------ANAC81    --------->ARR14(2)     --------->DEAR3(1)                    --------->YAB1  <---------ANAC46  -- -------GLK1(1)           --------->DEAR3(2)                     ----------->GT1 <---------ANAC58  <- ------>GLK1(1)          ------>NtERF2                        ------>ZmHOX2a(1)  <---------ANAC58<---   atttccgattccccgatacagagacgatgccgacggattcgaaaatggccaagtttcttcaatcctatggtaatttcttcgtttcgtcttcttaggcggc  404700                                                       --------->CCA1(2)                                                      <---------ARR14(2)                                                     <------ZmHOX2a(1)                                                     ============================HOX2a_HOX2a                                                     ===========================HOX2a_HOX2a                                                  <-----------RAV1(2)                                                 --------->At4g35610           --------->At4g35610                                                 <---------At4g35610           <---------At4g35610     ------>ZmHOX2a(2)                           --------->ZAT2          --------->At4g35610   <---------ARR11(3)                            <---------ZAT2          <------ZmHOX2a(2)   --------->ARR11(3)                          <---------PCF2           --------->ARR11(3) >NtERF2                                     <---------MYB46(3)     --------->HSFB2a(2) -NtERF2<----------DOF2                   <------MYB83<---------ARR11(3)<---------ARR11(3) --DEAR3(1)   <----------DOF2             <------MYB46(1)<---------YAB1 --------->ARR14(2) --RAP2.6(2)---------->ID1               --------->MYB55(2)         <---------HSFB2a(2) ------->At4g35610                       <---------MYB46(3)        <---------LBD16 --------At4g35610                       <---------AtMYB61--------->ATHB12------>ZmHOX2a(2)    ------ --------RAV1(2)    --------->AHL20(2)--------->ATHB12--------->ARR14(2)<---------ARR14(2)    <------   cagatgatctctttttctttttttatataactgaaactttcgattggtgggagcaggatatgatttgattctgggatctgtagctgcaatctatgtggtc  404800                                         --------->MYB111(1)                                         --------->MYB46(2)                                         --------->MYB59                                        <--------P                                        <---------MYB55(1)                                       <---------MYB52(1)                                     <---------TOE1(3)                                     <---------TOE2(3)       --------->ARR14(2)           <-----------RAV1(2)       <---------ARR14(2)  <----------DOF2   <------NtERF2         --------->At4g35610  ----------->RAV1(1)   <---------ARR11(3)<------MYB46(1)                      <----------DOF2  ------>NtERF2         --------->ARR11(3)<------MYB83                        <---------MYB52(1) --->WRKY18(1)  --------->ALFIN1   <-------TEIL                       <----------DOF2          <----- -----HVH21  <---------TOE2(3)    <-----------HVH21              <---------ALFIN1            <-------   atggcaccatatactaaggtggaagagagcttcaacgttcaggtaggttttcaaagtatttagagtcacactctttctccgttttactgaaaccgtttca  404900                                      --------->ATHB12                                      <--------HAHB4                --------->ANAC46      <---------ICU4                <-----------GT1      --------->ANAC58    <-----------GT1                       <----------DOF2      --------->ANAC58  <----------DOF2                 <---------ZAT18 ------GT1      --------->ANAC58     --------->ICU4     --------->ZAT18                     <-------- ----HVH21      --------->ANAC58     <---------ATHB12  ----------->HVH21             <----------DOF2   ctcgtctcaagtcaatgcacgacattctttaccatcgccatcatttggactctgtgagtgacctctctttttacttcttctctgaagctttactcttttt  405000                                                                                  --------->LBD16                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                               ------>MYB46(1)                  --------->YAB1   --------->LBD16                               ------>MYB83               --------->ZAT6        --------->LBD16                             <---------MYB59              --------->YAB1    --------->ARR14(2)                            --------->DEAR3(2)           <---------ATHB12   <---------ARR14(2)     --                           <---------At5g28300     <-----------GT1 --------->ATHB12 --------->ALFIN1                          <-----------GT1       <---------AHL20(2)<---------YAB1<---------LBD16    <-                --------->bZIP60(1)         <---------AHL20(2) <---------YAB1  <---------LBD16     <-     --------->ZAT6    <---------ICU4   <----------DOF2------>ZmHOX2a(1)   --------->GLK1(1)      <-- --DOF2         <---------bZIP60(1)    <------------------------ANAC81     <---------GLK1(1)      <--   ttttttatctctagagtgatgtcaatttttaccgacttctgtctttttatttttttcctatcagtatgatcatttggagttccccggtgttgtccctcga  405100  Previous    Next  AGI:  At1g02140.1    Description:  HAP1/MAGO/MEE63 (MATERNAL EFFECT EMBRYO ARREST 63); protein binding. Identical to Protein mago nashi homolog [Arabidopsis Thaliana] (GB:O23676); similar to unknown [Populus trichocarpa] (GB:ABK93059.1); similar to mago nashi-like protein 1 [Physalis pubescens] (GB:ABQ11262.1); contains InterPro domain Mago nashi protein; (InterPro:IPR004023) Range:  from: 403190    to: 404456    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02145.1    Description:  similar to mannosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G14850.2); similar to mannosyltransferase, putative [Arabidopsis thaliana] (TAIR:AT5G14850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70510.1); contains InterPro domain Alg9-like mannosyltransferase (InterPro:IPR005599) Range:  from: 404600    to: 408614    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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