Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ---------->DOF2     <------ZmHOX2a(2)   <---------At4g35610                                                             ------->TEIL   --------->At4g35610                                                             <-----------GT1 ----------HVH21    <---------ICU4                                             <---------TOE2(3) ----->DAG2        --------->ICU4     ---------->DOF2                     <---------ZAT6 ---->DOF2     <-----------TGA1----------->GT1 --------->TOE2(3)       <---------ATHB12           ---   aggtcagatcaaagcatcgtcatcagtagcaagaagaaaaaaaagaaaacatcaacttacaaaatcgactccaatagtgctaatgtaactttctacataa  401500                    ------->GAMYB                   --------->MYB46(3)          <---------At4g35610          --------->At4g35610                                          <----------ID1         ----------->RAV1(1)                                         ---------->DOF2      ------>ZmHOX2a(1)                                <---------GLK1(1)    =================RAV                    <---------ZAT14     ------------------------>ANAC81    ----------->RAV1(2)--------->YAB1   --------->ANAC58       ---------->DOF2                  ----- --------->YAB1    <---------MYB52(2)   --------->ANAC58------>ZmHOX2a(2)                      <----- ------>YAB1    <----------ID1        ---------->DOF2 --------->ARR11(3)                --------->MYB52(1)   gaatcatcctgcagcagaacaacaaacatgaacaaatgtagaaagctacagtgtttgatctctgagaaagaaaaagacaaaaaaaaaaacttacagagaa  401600                              <---------ARR14(2)                              --------->ARR14(2)                              --------->GLK1(2)                             <---------GLK1(2)                                                      -                        ------>NtERF2                                                               <                       --------->ANAC58                                                            --                       --------->ANAC46                               --------->ARR14(2)           <-                       --------->ANAC58                               <---------ARR14(2)    ---------                   <---------ANAC58          <------ZmHOX2a(1) --------->At4g35610      <-----------GT1       <----------ID1 --------->SPL7  ---------->DOF2         <---------DEAR3(1)      <---------AHL20(2)  ---------->DOF2  <---------ANAC58--------->LBD16       --------->ARR11(3)    --------->ANAC58  ---- ---->GLK1(2)  <---------ANAC58   --------->LBD16        <---------ARR11(3)    --------->ANAC58 <---- ----GLK1(2)   <---------ANAC58  <---------LBD16     ---------->DOF2 <---------GLK1(1)--------->AHL20(2)   tctcaaaagaagacaagacttgcctacgccagaatccccgataagcaggagcttgaaaagatagtcgctgcaaatcccaaaacgctaattaaaccctagg  401700            --------->AHL20(2)     --------->LBD16   <---------LBD16  ------>MYB46(1)  ------>MYB83 -------->AtMYB61                                                                <-------TEIL ---------ALFIN1                                                               <---------ARR14(2) ------->MYB46(3)    --------->MYB52(1)                                        --------->ARR14(2) --------MYB55(2)<---------AHL20(1)                                           ======================= >TOE1(2) --------->GLK1(2)----------->GT1                                    <------ZmHOX2a(1) <---- ----->ARR14(2)  --------->AHL20(1)                        ---------->DOF2 <---------LBD16     ------ --ZmHOX2a(1)   --------->AHL20(2)                 --------->ETT(2) <-----------GT1            ======   aaccacccggagaatcaaatatataacagaggtaatttcgacccaagtatgtgtcgatggagaaaggaacttactactcaggattcatggttttcgatct  401800                                              <----------DOF2                                   ------>ZmHOX2a(2)                                  --------->GLK1(1)                                  <---------GLK1(1)    <------ZmHOX2a(1)             <------ZmHOX2a(2)                                  <-------TEIL    =====================================HOX2a_HOX2a                               <---------ARR14(2) =HOX2a_HOX2a                    --------->ARR11(3)                               *TSS -------RAV1(1)                  <---------ARR11(3)                             <------ZmHOX2a(1) >ZmHOX2a(2)                    <---------GLK1(1)                            <------ZmHOX2a(1) ==========HOX2a_HOX2a          --------->GLK1(1)  <---------YAB1    <-----------GT1--------->GLK1(2)   gtgggaggaagagcagcgagcgatacagagccagagatctctctctctcttttctgattttctctcgcgatttacaagaggaggagattcagtgtttggg  401900                                                                                    --------->ANAC46                                                                                <------ZmHOX2a(2)                                                                               --------->ARR14(2)                                         --------->AHL20(2)                    <---------ARR14(2)                                     ----------->GT1                        <---------TOE1(2)                            <--------ATHB1                                 ==========================                            --------->YAB1<---------YAB1                   ------>ZmHOX2a(1) ------->GAMYB        --------->AHL20(2)  ---------->DOF2                               --------->TOE1(2) ---------        <---------AHL20(2) <---------ATHB12            <----------DOF2    --------->TOE2(2) ---------        --------->YAB1     <---------ATHB51   <-------TEIL          <---------TOE1(3)   <---------At4g35610     --------->YAB1    ------------>CBF  <---------AHL20(2)         <---------TOE2(3)   --------->At4g35610   ccttgaataataatatgagcgaaggcccaataatgcaaaagattaaaattcattcttctttcacaagtttagggttcctacgatccactcagcaacgaaa  402000                  <---------ZAT14        --------->ANAC46          ----------->RAV1(1)            --------->ANAC58         --------->ANAC58                --------->ANAC58         --------->ANAC46              ---------->DOF2         ----------->HVH21            <---------ATHB12     --------->ANAC58          <---------ATERF1(1)     --------->ANAC58        --------->ATERF1(1)  =============================HOX2a_HOX2a          <---------YAB1  <------ZmHOX2a(2)        --------->ALFIN1        --------->AHL20(2)             ----------->GT1   < ========HOX2a_HOX2a    <------ZmHOX2a(1)<----------ID1 <-------TEIL          <---------TOE1(3)    -- >ANAC58 <---------ETT(1) --------->At4g35610      <---------AHL20(2)         <---------TOE2(3)   --- >ANAC58 --------->ANAC58 <---------At4g35610 --------->ICU4     <----------DOF2<-------GAMYB     ---   atggatcaagcccgacagagtccagaggagcggaggcccaataacgccaagattaaaattcattcttctttcacaagtttagggttgtaaattggccctt  402100                                                                                                   <-                                                                                                 ----                                                                                                <----                                          <-----------RAV1(1)                               <--------        --------->ANAC46                 <---------ARR11(3)                                 <--------    <------ZmHOX2a(2)                    --------->ARR11(3)                                <---------ANAC58   <---------ARR14(2)                 <-----------RAV1(2)                              <---------ANAC58   --------->ARR14(2)                 <---------HSFB2a(2)                              <---------ANAC46 ---------TOE1(2)                     ================RAV                              <---------ANAC58 ---->ZmHOX2a(1)                  <---------PCF2                                  <-----------RAV1(1) ------>TOE1(2)                 <---------MYB46(3)------>ZmHOX2a(2)        <-----------GT1 <---------ANAC58 ------>TOE2(2)              <---------ANAC46   <---------AGP1       <-------TEIL <---------MYB46(3)   cctacgatccactcagcaattggagattgttttgtggttcccagatgttggatctatactagtcttcttgattcatttttccaattgttgcttgcttttt  402200                                                     ----------->GT1                                          <---------LBD16                          --------->PCF2                          --------->CCA1(2)        <------ZmHOX2a(1)               <---------TCP20 --------WOX13(1)        --------->ARR14(2)      --------->ALFIN1                  <---------TCP15(1) ----->ATHB12            <---------ARR11(3)     <------ZmHOX2a(1)                 <-----------HVH21 -----YAB1               --------->ARR11(3)<---------HSFB2a(2)         <---------ANAC46 -DAG2                   <---------ARR14(2)--------->HSFB2a(2)         <---------ANAC58      -------- --DOF2      <---------AHL20(2)        <----------DOF2----------->GT1  <---------ANAC58      <-------   gattgacatctatattttaagttgggagatatactctaactctttctggaggaggaggttaaaacaaggtaaggcttggactcgggtcccatcttccagt  402300                                   <---------ALFIN1  <---------ARR11(3)              <---------At4g35610                                              --  --------->ARR11(3)     ---------->ID1                              --------->ANAC46         ------>ZmHOX2a(2) --------->At4g35610 <---------ANAC58                              --------->ZAT6             ======= ->HSFB2a(2)         <---------ANAC58 --------->DEAR3(1)     <---------AHL20(2)             <-------- --HSFB2a(2) <---------At4g35610  --------->At4g35610        <-----------GT1                ---------   agaagctctctctccagttgatgccttgtcgatttcagcaccgtctgccaaacaaacacaaatttacttacactcagtctctgaagactgagttgatctc  402400  Previous    Next  AGI:  At1g02130.1    Description:  ATRAB1B (Arabidopsis thaliana responsive to abscisic acid 1B); GTP binding. Identical to Ras-related protein ARA-5 (ARA-5) [Arabidopsis Thaliana] (GB:P28188); similar to AtRABD2b/AtRab1A (Arabidopsis Rab GTPase homolog D2b), GTP binding [Arabidopsis thaliana] (TAIR:AT5G47200.1); similar to GTP-binding protein [Pisum sativum] (GB:BAA02118.1); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579); contains InterPro domain RNA polymerase sigma f Range:  from: 400035    to: 401882    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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