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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
-------
--------->
YAB1
--------
-------->
ZAT18
--------->
YAB1
----->
At4g35610
<---------
At4g35610
---------->
DOF2
------
ZAT2
--------->
WOX13(1)
--------->
YAB1
----------->
GT1
------
At4g35610
--------->
At4g35610
<---------
YAB1
----------->
GT1
------>
ZmHOX2a(2)
----->
ZAT2
--------->
AHL20(2)
--------->
ICU4
---------->
DOF2
--------->
ARR11(3)
--->
DOF2
<---------
YAB1
--------->
WOX13(1)
--------->
At4g35610
<---------
ARR11(3)
g
ctgcacaattacgattaatcagctactagtatctatcaagttgttatgatcagcgaagaacaaaagcatgtaaaaccctagatcgtgaaaagcataaag
389400
<------
--------->
ARR14(2)
--------->
PCF5
<---------
ANAC58
--------->
TCP16(1)
<---------
ANAC46
<---------
ANAC46
<---------
PCF5
<---------
MYB46(3)
<---------
ANAC58
--------->
TCP20
--------->
TOE1(2)
<---------
LBD16
<---------
bZIP60(2)
<---------
PCF2
<--
----------->
RAV1(2)
<---------
ARR11(3)
<---------
O2
--------->
PCF2
---
===================
RAV
--------->
GLK1(2)
--------->
O2
------>
NtERF2
<--
-->
DAG2
--------->
ATHB12
<---------
GLK1(2)
--------->
ALFIN1
--------->
At4g35610
--
-->
DOF2
----------->
RAV1(1)
--------->
ARR11(3)
<------
ZmHOX2a(1)
--------->
YAB1
<---------
ARR14(2)
tagtagtac
ctgggcaacattgggtagagccaaaatctcggagaaggcgaagagagaaggatgcgatgtggcttcgatgatgagcgggcccagagcctcg
389500
------>
ZmHOX2a(2)
<-----
<---------
ARR11(3)
<-----
--------->
ARR11(3)
<---------
--------->
ZAT2
<---------
YAB1
<---------
GLK1(1)
<---------
MYB46(3)
<---------
AtLEC2
--------->
ZAT2
<---------
ANAC58
--------->
MYB55(2)
---
LBD16
--------->
At4g35610
--------->
YAB1
<---------
At4g35610
<---------
AtMYB61
-------
ARR14(2)
<---------
ZAT2
<---------
ANAC58
<---------
MYB52(1)
------>
ARR14(2)
<---------
At4g35610
<---------
ANAC58
--------->
LBD16
-------
GLK1(2)
--------->
At4g35610
<---------
ANAC58
<---------
LBD16
------->
GLK1(1)
<----------
DOF2
<---------
ATHB12
--------->
GLK1(1)
<---------
GLK1(1)
gatttgcaagtagaagctcgcttcacgagctgatcaatgatctcggcttgcttctgctcgatatccat
cttccaaacaaatcgatttccggtggtttagg
389600
<
<---------
MYB52(1)
---
<-----------
GT1
<------------------------
ANAC81
---
<---------
ANAC58
<---------
ANAC58
-----
<----------
DOF2
<---------
ANAC58
-----
----
TOE2(3)
--------->
MYB52(1)
--------->
At4g35610
------
----
TOE1(3)
--------->
YAB1
<---------
At4g35610
<-----------
TBP
--------->
ANAC55(2)
-
DOF2
<---------
ANAC58
--------->
AHL20(2)
*
TSS
------>
ZmHOX2a(1)
<-----------
GT1
---------
gttttctttcttaccacactaataacgaataaaatcccaaacttctt
ctctctgctccttccttcttccgtttttatattactgttttttttatgtgacc
389700
<------------
CBF
<---------
ICU4
-------->
HAHB4
--------->
ATHB51
--------->
ATHB12
<--------
ATHB1
<---------
AHL20(2)
<---------
YAB1
<---------
ATHB51
--------->
HSFC1(1)
<---------
HSFB2a(2)
--------->
ARR14(2)
--------->
ICU4
----
---------
MYB59
--------->
YAB1
---------
--->
MYB46(1)
<---------
AHL20(2)
<--------
--->
MYB83
<---------
HSFC1(1)
--------->
HSFB2a(2)
<---------
MYB46(3)
------>
HVH21
--------->
GLK1(2)
<---------
TOE1(2)
<----------
---->
MYB46(3)
--------->
ARR11(3)
<---------
ANAC58
<-----------
HVH21
--->
DEAR3(2)
<---------
GLK1(2)
<---------
ANAC46
--------->
LBD16
-->
HVH21
--------->
HSFB2a(2)
<---------
ANAC58
--------->
ARR14(2)
gaccgaattcttctagaatcttgtttaataattgggctcaaatttcgtagtttctgggccaaggcctactaagagaaatattagaaaccgcgtctggtga
389800
*
TSS
--------->
GLK1(2)
--------->
LBD16
<---------
ARR14(2)
<---------
LBD16
<---------
GLK1(2)
<
<---------
ANAC46
--------->
ARR14(2)
<-
------------>
CBF
<------
NtERF2
<--
<---------
ATHB12
--------->
TOE2(3)
<---------
ANAC46
<---
----->
At4g35610
<<<<<<<<<
TBF1
<---------
LBD16
-----------
>
At4g35610
--------->
LBD16
--------->
KAN4(2)
------>
NtERF2
===========
-
At4g35610
<---------
LBD16
<---------
KAN4(1)
--------->
DEAR3(1)
--------->
At4g35610
-
RAV1(2)
<---------
LBD16
--------->
KAN4(1)
<---------
At4g35610
<---------
DEAR3(1)
------->
GAMYB
gcccaaacaat
cccggggaagagagagactattgaatattcttcttccttcattttggctgagagagcgacgacg
atggcggaatctcgcagcaacagag
389900
<----------
DOF2
--------->
ANAC46
--------->
ANAC46
<-----------
RAV1(2)
--------->
ANAC58
<-------
TEIL
--------->
LBD16
-------->
P
<---------
ARR14(2)
------>
NtERF2
--------->
ANAC58
<-------
GAMYB
------->
GAMYB
--------->
SPL7
<---------
DEAR3(2)
--------->
ANAC58
------>
MYB46(1)
<---------
MYB46(3)
--------->
ANAC46
------>
MYB83
---------
DEAR3(1)
--------->
ANAC58
<---------
MYB46(2)
<---------
ZAT18
-----
NtERF2
--------->
MYB52(1)
<---------------
AtSPL8
<---------
ICU4
-------
RAP2.3(1)
--------->
MYB46(3)
--------->
DEAR3(1)
--------->
AHL20(2)
------
DEAR3(1)
------->
TEIL
<---------------
AtSPL3
<---------
AHL20(2)
>
RAV1(1)
<---------
MYB52(2)
----------->
GT1
<---------
ALFIN1
<----------
DOF2
<----------
================
RAV
<-------
TEIL
--------------->
AtSPL8
--------->
TOE2(3)
<----------
DOF2
<-
cggcggttcaggctactaacgacgatgcatccgccagtaaatt
gtacgcctacctctttctctcttctttaattagggctcttcttttttttttgttgtt
390000
<----------
DOF2
------>
ZmHOX2a(2)
--------->
ARR14(2)
<---------
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ARR11(3)
---------->
DOF2
--------->
ARR11(3)
<---------
AGP1
--------->
ARR11(3)
--------->
CCA1(2)
<---------
ARR11(3)
<---------
CCA1(2)
---------->
DOF2
----------->
GT1
<----------
DOF2
-
RAV1(1)
--------->
AHL20(1)
--------->
DAG2
<---------
CCA1(2)
--------
ANAC46
<---------
AHL20(1)
---------->
DOF2
<-------
TEIL
---------->
DOF2
gttgtggatctttgagcctagataatatttttaaag
gtcttgtgtcaaaaagggatatatgaaagacgactatgttcatctctttgtgaaaagacctgtt
390100
<---------
YAB1
--------->
TOE2(3)
--------->
ATHB12
<---------
ICU4
--------->
YAB1
<--------
HAHB4
--------->
ICU4
<---------
YAB1
<---------
ATHB12
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
GLK1(1)
<---------
GLK1(1)
---------->
DOF2
<---------
ARR11(3)
--------->
HSFB2a(2)
<-----------
ARR10
--------->
At4g35610
<---------
ARR14(3)
--------->
ALFIN1
--
--------->
ARR14(3)
<---------
MYB52(1)
<-
--------->
ARR11(3)
<-------
GAMYB
<---------
HSFB2a(2)
<-
<---------
AGP1
<----------
DOF2
<---------
SPL7
--
--------->
ARR14(2)
<---------
DAG2
------>
NtERF2
--------->
ANAC46
<---------
ARR14(2)
<---------
TOE2(3)
<---------
At4g35610
<---------
ARR11(3)
cgaagatctcccatcattaatcgaggttacttttcccgttgggctgccttccgaaagcttatgtctcagtttcttctaagcgggacaagttctaagaaac
390200
--------->
ATERF1(1)
<---------
At4g35610
<---------
ANAC58
--------->
ZAT2
<---------
ANAC46
--------->
At4g35610
<---------
ANAC58
<---------
ZAT2
<-------
TEIL
<--------
<---------
ARR14(2)
<-----------
RAV1(1)
------>
MYB46(1)
<---------
LBD16
<---------
ANAC58
------>
MYB83
------->
ARR11(3)
<----------
DOF2
<---------
ANAC58
<----------
DOF2
--------
ARR14(2)
<---------
ANAC58
<---------
ANAC46
<---------
DAG2
<-----------
GT1
--------
GLK1(2)
<---------
ANAC46
<-------
GAMYB
<----------
DOF2
<---------
MYB52(1)
------->
ARR14(2)
<---------
ANAC58
<---------
At4g35610
<----------
DOF2
<---------
MYB59
agatactgtctctcggagctggctttgatactacctattttcagttgctg
gtgcgtcttctttttcttctcctttttgttagcttttaccaaattcacca
390300
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AGI:
At1g02090.1
Description:
FUS5 (FUSCA 5); MAP kinase kinase. Identical to COP9 signalosome complex subunit 7 (CSN7) [Arabidopsis Thaliana] (GB:Q94JU3;GB:O81247); similar to unknown [Populus trichocarpa] (GB:ABK94750.1); contains InterPro domain Proteasome component region PCI (InterPro:IPR000717)
Range:
from: 387277
to: 389647
Orientation: Reverse
Links:
TAIR
MIPS
AGI:
At1g02100.1
Description:
leucine carboxyl methyltransferase family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69755.1); contains InterPro domain Leucine carboxyl methyltransferase (InterPro:IPR007213); contains InterPro domain Leucine carboxyl methyltransferase, subgroup (InterPro:IPR016651)
Range:
from: 389812
to: 392816
Orientation: Forward
Links:
TAIR
MIPS
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