Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 <---------DAG2                                               <----------DOF2                                              <---------ANAC58                                            <-----------GT1                                         ----------------------->TaNAC69(2)                                       <----------DOF2                                      <-------GAMYB                                     ----------->GT1                                     <---------DEAR3(2)                                     <---------MYB46(3) --->O2                             <---------DEAR3(1) ----ANAC46                         <---------RAP2.6(2)  <---------ARR14(2) ----TGA1a                     --------->TOE1(2)         --------->ARR14(2) ----O2         <----------DOF2--------->TOE2(2)    <-----------GT1                             <---- --->TGA1a   --------->ANAC58 ----------->RAV1(2)  ----------->HVH21                           ------ -->HVH21    --------->ANAC58--------->GLK1(2)<---------ANAC58                         <---------At4g35610   tgaacaccttcttgcaagctttgcattggaaaacctgggcggttttttgctttttgacggttttgcccttaccatgtccatgttgtttatgctgatcacc  358700                                             --------->ARR11(3)                                             <---------ARR11(3)           --------->LBD16          <---------At4g35610          ----------->RAV1(2)       >>>>>>>>>TAC1          <---------LBD16           --------->At4g35610          <-----------------AGL1    <-------GAMYB                                                   -      <---------ARR14(2)        ------------>AtMYB77                                      <---------ZAT18      --------->ARR14(2)       --------->ANAC58                                           --------->ZAT18 --------->AtLEC2         --------->ANAC58 --------->ANAC58    <----------ARF1         <---------ANAC46 -----ALFIN1--------->LBD16    --------->ANAC58           <---------MYB52(1)       <---------At4g35610 --->MYB46(3)             --------->ANAC58 --------->ANAC58    <----------ID1  <---------YAB1       =   accatgcgcatcccctgaattggacaacaagacaagacagttggcaagctcttcgtcttcgtttggagacaagttaagatgatgatgctgagtggacatc  358800                          ----------->HVH21                         <-----------HVH21                        <---------O2                        --------->TGA1a                        <---------ANAC55(2)                        --------->ANAC55(2)                        --------->O2                        <---------TGA1a                        <---------bZIP60(2)                        <---------bZIP60(1)                        <---------ANAC55(2)                        --------->bZIP60(1)                        --------->ANAC46                    --------->SPL7                                 --------->ANAC58              --------->ANAC46                                     --------->ANAC55(2)             <---------LBD16 <---------bZIP60(2)                   --------->ANAC58 ----->ZmHOX2a(2)  <------ZmHOX2a(1)                  --------->ANAC46  <---------ATHB12<-------TEIL =========================HOX2a_HOX2a  ------>ZmHOX2a(1)      <---------ICU4  <---------AtLEC2     --   gatctctccctcttccacggaggacgacgtgacatgttgtcctcatcgtgttgtccacgactgaacattacgaaatcaatgcatggtgagttcatggctc  358900                                                                            <---------ANAC58                                                                            <------MYB46(1)                                                                            <---------ANAC58                                                                            <------MYB83                                                                           <---------MYB46(3)                                                                           --------->MYB111(1)     --------->ALFIN1                                                      --------->MYB46(2)    <-------MYC2                                                     <---------ANAC46    ------->MYC3                                                   <-----------GT1    <-------MYC3                    ---------->DOF2                --------->MYB52(1)    ------->MYC2                 --------->AHL20(2)               ----------->HVH21  ------->TEIL            <---------ANAC46                       <---------MYB52(2)            <----- ------->AtLEC2        <---------AtMYB61   ---------->DOF2  <---------ZAT6 <---------AtMYB61  -------   catgcatgtgtgtgttcaaagtgttttggtgtgaattaaaaagaagaaagcccttgtttttagtggaagtaacgggtttggtgtcttcttgttcatgtgg  359000                               --------->ALFIN1                              <-------PIF5                              ------->MYC2                              <-------MYC2                              <-------MYC3                              ------->MYC3                              ------->PIF5                              ------->MYC4                              <-------MYC4                             <---------TGA1a                             --------->ANAC55(2)                             --------->O2                        --------->ANAC46                      <-----------GT1                      <---------DOF5.7(2)                    --------->DOF5.7(2)                   <----------DOF2                                       ------->TEIL                   ====================bZIP_DOF                        <-------TEIL                  <---------ANAC58             <---------DAG2         --------->ANAC58               <-------PIF5  <---------ANAC55(2)                      --------->ANAC58          --------->ANAC58   ======================bZIP_DOF          <-------MYC3      --------->At4g35610    --------->TGA1a   <----------DOF2       ------->MYC3  --------->ANAC46<---------ANAC58      <----------DOF2 --------->HSFB2a(1) ----MYB46(3)  ------->PIF5  ======================bZIP_DOF     <-----------HVH21 -->ALFIN1--------->ANAC58   <---------O2   <-----------GT1   ------>ZmHOX2a(1)         --------->ARR11(3)   ttccaagtagctaagcacttgctttaacgacacgtggtgcaacttttgactttttccaacattcctagtcacatgcatctattctatatagatgttgttt  359100                                                                                --------->LBD16                                                                               <---------ANAC46                              <---------YAB1                    <------ZmHOX2a(1)                             <---------ARR11(3)         ------------>CBF      --------->At4g35610                        ------------>CBF               --------->YAB1         <------NtERF2                     <---------ANAC58                  <-----------GT1        <---------At4g35610                     <---------ANAC58                 <---------YAB1        <---------DEAR3(1)                    <---------ICU4                  --------->YAB1     --------->ALFIN1    --------->YAB1 <---------YAB1            ----------->GT1  --------->MYB59 <---------LBD16   aacaaataatactctcatttcatgcttacaatatgtttataacccaaatgtaaattataacaattaggaagaggtgaggctgcggatgagaaggccttcg  359200                                                          <<<<<<<<<TBF1                                                     <----------DOF2                                                    <---------DAG2                                               <-----------TGA1                                               <-----------HVH21                                    <                                              <---------ANAC58                                    <--                                              --------->bZIP60(2)            --------->ARR14(2)   <--                      --------->ANAC58        <---------ANAC58               <---------ARR14(2)   <--                      --------->ANAC58    <---------At4g35610   <---------ZAT2  --------->ANAC46-----               ---------->DOF2            --------->At4g35610   <---------At4g35610             <----          <---------ARR14(2)             <-----------RAV1(1)    --------->At4g35610 <-----------HVH21          --------->ARR14(2)     <---------ALFIN1<---------ALFIN1    <---------CCA1(2)     <-------TEIL   aaggtgattccaggtccgaaagctaagccaagtccccactcttgtgctgcgtcacctttcttcttcagctcatctctcatatactccatcacatacagta  359300                               --------->DEAR3(1)                               --------->ANAC58                               --------->ANAC58                              ------>MYB46(1)                  --------->ANAC46            <---------TGA1a   ------>MYB83            ============================MYC_MYB            --------->TGA1a --------->DEAR3(1)       --------->At4g35610  <---------ALFIN1       <---------At4g35610  --------->AtMYB61       <---------GLK1(2)                               <    <---------At4g35610    --------->MYB46(3)      <---------ZAT2                             ------- -----------RAV1(1)--------->LBD16         --------->At4g35610    --------->ZAT2              <------ -------ANAC46    --------->LBD16          <---------At4g35610    --------->At4g35610     <-------TEIL -------ANAC58    --------->ANAC55(2)   <---------At4g35610       <---------At4g35610  <---------DEAR3(2) -------ANAC58    <---------ANAC55(2)   --------->At4g35610       <---------ZAT2  --------->HSFB2a(2) ---->ARR14(2)   <---------LBD16------->GAMYB      <---------At4g35610            <---------HSFB2a(2) -----ARR14(2)   <---------HSFB2a(2)   <-----------RAV1(1)<----------DOF2<---------MYB52(1)   <------   tcgtgttgctgctcacgttcccgtaatccaccaacgcccttctgctgctctccagcttctctttctccagcttcagttttgtctccagacggttcagaat  359400         <---------HSFB2a(2)         ------>ZmHOX2a(1)         --------->HSFB2a(2)       ----------->RAV1(2)      ------>ZmHOX2a(1)  <---------ARR14(2)                                                    <---------GLK1(2)  --------->ARR14(2)                                         <----------DOF2       --------->GLK1(1) ---------TOE1(2)                                           <---------DAG2     <---------HSFB2a(2) -->ARR14(2)                                             ------>NtERF2 <---------At4g35610 ---GLK1(2)                   <-----------HVH21         --------->DEAR3(1)     --------->HSFB2a(2) ---ARR14(2)     --------->MYB46(3)               ---------->CDC5      --------->At4g35610          -   cgcaggtcctcctggatgaacagcccagaacatgtcattgaactccatcgactcatcgccagcctttcccatcagcttcttgcagaactcttctatgttc  359500                                                                                              -------                                                                                          --------->ARR14(2)                                                                                          <---------ARR11(3)                                                                                          <---------ARR14(2)                                                                                        --------->ANAC58                                                           ------>MYB46(1)              ----------->ARR10                <------MYB83                               ------>MYB83                 --------->ANAC58                <------MYB46(1)                          ------->GAMYB              ------>NtERF2               <---------AtMYB61                         --------->AtMYB61         --------->ANAC46            --------->LBD16                             --------->MYB46(3)         --------->LBD16           <---------ANAC46                          <---------WRKY38(1)          <------NtERF2          <---------LBD16                            <---------WRKY12             <---------LBD16         <-----------RAV1(1)                        --------->WRKY18(1)       <-----------HVH21   ---       --------->At4g35610  <---------ZAT2      ==========================HOX2a_HOX2a<------NtERF2<--  <---------CCA1(2)         --------->ZAT2      ------>ZmHOX2a(1)          <---------ANAC46   <------ ----->ZmHOX2a(1)--------->ARR11(3)            --------->TOE2(3)   <------ZmHOX2a(2)--------->LBD16--   tcctctatcttctgcgggaggtctcgtccaagcttgaagtttatgccttcctcagtcaacctcccctcgatcacgttctgtgtccccggcaagaactgct  359600  Previous    Next  AGI:  At1g02040.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT4G35280.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70614.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 358104    to: 359078    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02050.1    Description:  chalcone and stilbene synthase family protein. similar to chalcone and stilbene synthase family protein [Arabidopsis thaliana] (TAIR:AT4G00040.1); similar to chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] (GB:AAZ81862.1); similar to chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] (GB:AAZ81867.1); similar to chalcone synthase family protein [Arabidopsis halleri subsp. gemmifera] (GB:AAZ81872.1); contains InterPro domain Thiolase-like; (InterPro:IPR016039); contains InterPro domain Chalcone and stilbene synthases, C-terminal; (InterPro:IPR012328); contains InterPro domain Chalcone and stilbene sy Range:  from: 359117    to: 360518    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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