Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------LBD16                                --------->LBD16                               <---------ATERF1(2)                                      <------------AtMYB77                              --------->ATERF1(1)                                     --------->ARR14(2)        <------ZmHOX2a(1)     --------->DEAR3(2)                                      <---------ARR14(2) ------GAMYB                 --------->MYB52(1)                                       --------->MYB52(1) ------>ALFIN1              <---------ARR14(2)                                       ----------->HVH21 -------MYB46(3)            --------->ARR14(2)                                     --------->ANAC46 -------AtMYB61            <---------SPL7                                          <---------ANAC58 -----ANAC46       --------->At4g35610                    <-----------RAV1(2)      <---------ANAC55(2) -----ANAC58       <---------At4g35610              <---------WOX13(1)             <---------ANAC58 -----ANAC58     <------ZmHOX2a(1)  <------NtERF2<---------YAB1                    --------->ANAC55(2) -WOX13(1)     --------->ALFIN1--------->ATERF1(2)--------->ATHB12        <------ZmHOX2a(1)   gtgttggagaggaagaagaggagcagagaggtaccggcggaagggattaggctgattggcccagtcgagaccacgaggacctctcgcgtaaccgttcaag  354600                                                                                              >>>>>>>                                                                                           >>>>>>>>>TBF1                                                               <---------TOE1(3)        >>>>>>>>>TBF1                                                         ------>ZmHOX2a(1)           >>>>>>>>>TBF1  >                                                   <---------HSFB2a(1)              xxxxxxxxxxxxxxxxx                                                   --------->HSFB2a(1)            >>>>>>>>>TBF1  >>>>                                                   --------->HSFC1(2)          >>>>>>>>>TBF1---------                                                   <---------HSFC1(2)         xxxxxxxxxxxxxxxxxxxxxxx                                                <------ZmHOX2a(1)        --------->ANAC46 xxxxxxxxxxx                          <------ZmHOX2a(1)  <------ZmHOX2a(1) <---------TOE2(3) xxxxxxxxxxxxxxxxxxxx             <---------MYB46(3)   ---------->DOF2<---------ARR14(2)     --------->LBD16xxxxxxxxxxxxxx   gagtgcttcgtctggttgtggtacttgaggaccaattcaagcgaagaggaggaatcgtccttgttagggttttccacagaagaagaagaagaagaagaag  354700   >>>>>>>>>TBF1 >>TBF1 >>>>>>>>TBF1 --------->ARR11(3) xxxxxx>smallRNA(se3)                                                                               - >>>>>TBF1    <-----------HVH21     <----------DOF2                                     --------->ANAC58 --------------->ANAC81             <---------DAG2                                      --------->ANAC46 >smallRNA(se3)             ---------->DOF2                                             --------->ANAC58 xxxxxxxxxxxx>smallRNA(se3)--------->CCA1(2)       <------ZmHOX2a(1)                   --------->LBD16 xxx>smallRNA(se3)   <---------ANAC46           <---------HSFB2a(2)               --------->MYB46(3)< xxxxxxxxx>smallRNA(se3)  --------->ARR11(3)    --------->HSFB2a(2)              ------->TEIL    <---   aagaagaagaagagaaggtcatggcgaagataaaggcactttttggtgttcgaggaatggagagaagagaggtcgaagacgcgaacctccacgaaatcgt  354800                                                                         <---------LBD16                                                                 ------>ZmHOX2a(2)                                                                <------ZmHOX2a(2)                                                               ------->TEIL    <---------MYB46(3)                                                               <---------ARR11(3)           <---------ANAC58                                    --------->ARR11(3)     --------->ARR11(3)           <---------ANAC58                                    <---------ARR14(2)     <---------ARR14(2)      --------->ATHB12                                         --------->ARR14(2)     --------->ARR14(2)      <---------ICU4                                           <-----------ARR10    ----------->ARR10     <---------YAB1                                        ------>MYB46(1)     <---------DEAR3(2)     --------->ICU4                                        ------>MYB83 <---------LBD16--------->CCA1(2)   --------->YAB1                                         --------->MYB52(1)  <---------DEAR3(1)  <-------TEIL                   --------->ARR14(2)      --------->AtMYB61   --------->SPL7 -------->ARR14(2)        <-----------HVH21             <---------MYB52(2) ----------->HVH21        < ---------ARR14(2)     ------>ZmHOX2a(1) --------->At4g35610  <---------ARR14(1)  <-------TEIL   <--- ------TOE1(2)    <----------DOF2<---------ARR14(2)     --------->MYB46(3)--------->LBD16       -----   cggattcatcattgcttctcctttcctctgtctgggattcgacatctcaaaaccagaaaccaacggatctttgtaccgggacggttcagatatggatgga  354900                                                  --------->MYB46(3)                                             --------->HSFB2a(2)                                            <---------LBD16                                         <---------ANAC58            *TSS                                         =========================================bZIP_DOF                <---------ICU4           <---------ANAC46   <---------ZAT14             --------->TOE2(3)           <---------bZIP60(2)--------->ZAT14    <---------TOE1(3)                    <---------O2  --------->ZAT18    <---------TOE2(3)<---------ANAC58    <---------TGA1a<---------ALFIN1 -----------HVH21    <---------ANAC58    <---------ANAC58 --------->ANAC46           <----------DOF2 --------------AGL1  <---------ANAC46 ----------->HVH21<---------ZAT14          <----------DOF2    >> -->TEIL --------->GLK1(1)           <-----------HVH21 --------->ZAT14 <----------DOF2      ---------   ccggttaagggataaccaaaattgcctgtgatttctctctgtgacttggggaacaactccactgcaattacacctttgttttctttcctttttttaaaga  355000                        ----------->HVH21                       <-----------HVH21                      <---------ANAC46                      <---------ANAC58          ------------>CBF                                     --------->ABI4(2)          <---------ZAT18                                      <---------MYB46(3)          --------->ZAT18                                     --------->ALFIN1     ---------->DOF2  <---------ANAC58     <-----------RAV1(1)<---------AtMYB61  >>>>>>>>>TBF1  ---------->DOF2      <----------DOF2     <---------At5g28300 >>>>>>>TBF1   >>>>>>>>>RAP2.2        <---------DAG2     --------->MYB52(1) ->DOF2   --------->ZAT14     <-----------HVH21     ---------->DOF2                 <------NtERF2<---   agaagaagaaagtgcaatctaaaggcgtgactcgttagagcttttttgttgtccaaaagttacggtggtctctctgtctcttagtcggcaaaattccctc  355100                                                                                  <-----------TGA1                                                                                  <-----------HVH21                                                                                 --------->O2                                                                                 <---------O2                                                                                 <---------bZIP60(1)                                                                                 --------->ANAC55(2)                                                                                 --------->ANAC58                                                                                 <---------ANAC55(2)                                                                                 --------->bZIP60(2)                                                                                 --------->ANAC58                                                                                 ====================                                                                                 ====================                                                                                 --------->ANAC46                                                                                 <---------TGA1a                                                                                 --------->TGA1a                                                                                 --------->bZIP60(1)                                                                                 --------->ANAC55(1)                                                                                <-----------STF1                                                                       --------->MYB46(3)                                                                       --------->REM1(1)                                                           --------->ANAC58 --------->ANAC46                                                           --------->ANAC46------->GAMYB         <---                --------->ICU4         --------->ATHB12    --------->ANAC58================MYC_MYB           --------->ANAC55(2)        <---------AHL20(2) --------->ANAC46 --------->MYB46(3)  -------           --------->ANAC46 <----------DOF2     --------->MYB52(1)   ----------->RAV1(1)   <------ZmHOX2a(2) -------DOF2 <---------AHL20(2)  <---------AHL20(2)     --------->TOE1(2) <---------MYB52(2)  -------   tttaagagtatataagtaattttgggtattctttttttatttcattggcataacgaaacacacgacttgagcaacaacaaaccacgtcactcgatcacgc  355200                                                                 ====================bZIP_DOF                                                         <---------MYB111(1)                                                         <---------MYB46(2)                                                         <---------MYB59                                                        --------->ANAC55(2)  <---------WRKY18(1)       <-----------GT1                                  <---------ANAC55(2) --------->WRKY45     <----------DOF2                               <---------ICU4<---------TGA1a =======bZIP_DOF    --------->ANAC58        <---------GLK1(1)    --------->TGA1a<---------ALFIN1 =======bZIP_DOF    --------->ANAC46        --------->GLK1(1)    --------------------->WRI1 -------DOF2        --------->ANAC58      --------->ATHB12 ------>MYB46(1)  --------->WRKY38(1) -->ANAC58        ----------->RAV1(1)  <---------ANAC55(2) ------>MYB83   <----------DOF2        ---- -->ANAC58     <-----------GT1         --------->ANAC55(2)--------->MYB55(1)--------->WRKY12  -------   tttcatgctttaccattttcccacacaaatcgactactatcacatgatttccctcattacctaactcacttgtgttctttgaccacatcaaaatttgtcc  355300                                                                                                 ----                                                                                             --------                                                                                          --------->TOE1(2)                                                                                          --------->DEAR3(1)                                                                                          --------->TOE2(2)                                                      <---------YAB1         --------->ANAC58--------                                              ----------->GT1                --------->ANAC58<-------      <-------TEIL                           --------->ALFIN1       ------>MYB83         --------->DEAR3(2)   --------->ANAC55(2)         <---------ANAC58     <-----------GT1 ------>MYB46(1)      --------->MYB46(3)   <---------ANAC55(2)         <---------ANAC58    --------->ICU4  --------->WOX13(1)  --------->MYB52(1) -->ZmHOX2a(1)                 <---------ANAC46  <---------ICU4<---------WRKY18(1) --------->AHL20(2) --->ID1             <-----------GT1    ---------->DOF2        <-----------GT1 --------->YAB1<-------   tcaatacgtacacttggagaattttactacattacttggaatcaaaggtggtaattactatagtttgaccaatctgatcaagcattaaaaaaccgacgag  355400                                                    <---------YAB1                                                  --------->YAB1                                                  <---------ICU4                                                  --------->ATHB51                                                  <--------HAHB4                                                  -------->HAHB4                                                  -------->ATHB1                                                  <---------AHL20(2)                                                 <---------ATHB51                                           --------->ANAC58                                           --------->ANAC58                                     ------>ZmHOX2a(2)                                              <                                     =============================HOX2a_HOX2a              <---------ANAC58                                    <------ZmHOX2a(2)                                      <---------ANAC58                                    ==============================HOX2a_HOX2a              <---------ANAC46                                   <---------AGP1<---------YAB1                           <----------                      <------NtERF2--------->AGP1--------->ICU4                     <---------LBD16--                 <---------DEAR3(1)<---------ARR11(3)          ------>ZmHOX2a(2) <---------YAB1   <--            ===============================HOX2a_HOX2a       <-----------ARR10 --------->ATHB12   <-- <---------CCA1(2)  <---------DEAR3(1)--------->WOX13(1)     --------->ARR14(2)<---------ICU4    ---- -->NtERF2  ================================HOX2a_HOX2a      --------->ARR11(3)--------->ATHB51  <--- ->TGA1a    ------>ZmHOX2a(1)      --------->ARR11(3)<---------ICU4           --------->ICU4     ---- ->O2    ===================================HOX2a_HOX2a      <---------ARR11(3)<--------HAHB4  ------ --O2    ==================================HOX2a_HOX2a     ------>ZmHOX2a(1)  <---------YAB1<-------- --TGA1a ------>ZmHOX2a(1)   --------->ARR11(3)  <---------ATHB12   <---------ANAC46--------->At4g35610   gccatctcttcctcctccgatggcgctgggagatttagatctatcaagctaattattattcctgatcttctcgtgaattcattattagcggaagcgtgag  355500  Previous    Next  AGI:  At1g02020.1    Description:  nitroreductase family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO24524.1); contains InterPro domain Nitroreductase; (InterPro:IPR000415) Range:  from: 352637    to: 354969    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g02030.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G60580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70615.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 355321    to: 357258    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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