Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->ANAC58                              --------->ANAC46          --------->WRKY18(1) --------->ANAC58      <---------ZAT18        ------->PIF5      --------->LBD16        ------->MYC2      --------->ZAT14        <-------MYC2                   ----------->HVH21   <---------At5g28300       ------->MYC3              --------->STY1(2)             --------->ZAT2  <-----------GT1            <-------MYC3              <---------STY1(2)  ----------->GT1 -------TOE2(3)              <-------PIF5       ---------->ID1         <---------At4g35610 ----------   gaagttaccgcagtcaagagcgtcttcagcacgagcaactcgagcccttcgtcgtctagctcgtgacatttgcagatggtttcaatgagcttggaaagga  337200                                                                                    =================                                                                                    ------>ZmHOX2a(2)                                                                                <------NtERF2                                                                               ------>NtERF2                                                                               --------->LBD16                  --------->ALFIN1                                            <---------ANAC46                 <---------MYB52(1)                                          <---------LBD16                <---------DEAR3(2)                                         <---------DEAR3(1)               --------->ATERF1(2)                                       --------->MYB52(1)               <---------DEAR3(1)                                       <---------WRKY38(1)               <---------ATERF1(2)                                     <---------ATHB12             <------NtERF2                                             --------->MYB46(3)             ------>NtERF2            ------->TEIL                    --------->ANAC58           <-------TEIL<------ZmHOX2a(2)                              --------->ANAC58         <---------ARR14(2)       --------->LBD16                    --------->WOX13(1)    --------->YAB1         <-----------HVH21       --------->DEAR3(1)           --------->HSFB2a(2) <---------ARR14(2)         --------->ARR14(2)   <---------ALFIN1                <---------HSFB2a(2) --------->ARR14(2) >DOF2<-----------RAV1(2)    ----------->HVH21             --------->GLK1(2)------->GAMYB--------->GLK1(2)   gtagcgcctcaggtccgccggtgggatcagcctcaccgcgaacgtagccatgagcaataagcttctggatgcaatcaacggcgggatcgacaatcttgag  337300                                                                        =============================                                                                        ------>ZmHOX2a(1)                                                                       <---------ALFIN1                                                                      --------->ATERF1(1)                                                                     ------>NtERF2                                                                     <---------ATERF1(1)                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <---------At4g35610                                                                   --------->ATERF1(1)                                                                   <------NtERF2                                                                  <---------ORA47(2)                                                                  <---------ERF1                                                                  <---------RAP2.3(1)                                                                  <---------DEAR3(2)                                                                  <---------RRTF1(1)                                                                  <---------RAP2.6(1)                                                                  <---------MYB46(3)                                                                  --------->ABI4(2)              <---------ANAC58                                    ------>NtERF2              <---------ANAC46                                    <---------ATERF1(1)              <---------ANAC58                                    <---------DEAR4(2)        =========             <------NtERF2                                       <---------ATERF1(2)        =========           <---------DEAR3(1)                                    <---------RAP2.6(2)        <------ZmHOX2a(1)          --------->ATERF1(1)                  <---------DEAR3(1)<---------RAP2.3(2)      --------->LBD16          ====================================HOX2a_HOX2a        <---------RAP2.3(3)     <---------HSFB2a(2)          <------ZmHOX2a(1)              --------->TOE2(1)       <---------DEAR3(1)      <---------LBD16      <---------MYB46(3)                 --------->TOE1(1)      <---------At4g35610      <-----------RAV1(2)     --------->ALFIN1                  ------>ZmHOX2a(2)        <---------LBD16        --------->PCF5   <---------DEAR3(2)                --------->ARR11(3)         --------->ATERF1(1) --------->ALFIN1  <---------DREB2C(2)                <---------ARR11(3)        <---------RAP2.3(1)<---------bZIP60(2)  <---------DEAR3(1)             =============HOX2a_HOX2a  <---------ARR14(2)     <---------ANAC46 <---------LBD16                 <------ZmHOX2a(1)         --------->ARR14(2)<---------ANAC46 ================HOX2a_HOX2a   <---------TOE2(3) <------NtERF2<---------DEAR3(1)<---------ZAT14     <   aacgccggtggaggaggcgttgatgagagggctgaggatgatctcggactcggcgagagagtattcggcggctcctccgtcgtgaagtggtccaggaatg  337400                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)         <-------TEIL                      <-----------ARR10       --------->ARR14(2)             <---------LBD16       <---------ARR14(2)            <-----------RAV1(2)       <---------GLK1(2)             <---------LBD16       --------->MYB52(1)   ------>ZmHOX2a(2)          =====================HOX2a_HOX2a   ==================================HOX2a_HOX2a          ----------->TGA1   =============================HOX2a_HOX2a<---------ARR11(3)  ==============================HOX2a_HOX2a--------->ARR11(3)                  <---------ANAC58  ===================================HOX2a_HOX2a          ----------->HVH21 <---------DEAR3(1)  <------ZmHOX2a(2)           <------ZmHOX2a(1)    <---------ANAC58      <---------O2              <- --------->GLK1(2)            ======================HOX2a_HOX2a  --------->GLK1(1)              ----- --------->ARR11(3)      ==========================HOX2a_HOX2a  <---------ARR14(2)          <-------- <---------ARR14(2)      ===========================HOX2a_HOX2a --------->ARR14(2)<---------ZAT2----- --------->ARR14(2)      <------ZmHOX2a(1) --------->ARR14(2)   <---------GLK1(2) --------->ZAT2----- ========HOX2a_HOX2a----------->RAV1(1)--------->LBD16--------->SPL7     <---------TGA1a    <-------- =========HOX2a_HOX2a <-----------RAV1(2)  <---------ARR14(2)<---------ANAC46  <---------ANAC58------ ========HOX2a_HOX2a=============================RAV<---------SPL7       --------->O2   <---------ANAC58 ------ZmHOX2a(1) <------NtERF2 <---------KAN4(2)  <---------ANAC58      --------->TGA1a<---------ANAC58   gaggatccagattcagagtcggcaacaggagaggaattttcaggggatctaaggcgttcgatgacggatttgcactcgtgggcgagcttggagtgcttac  337500                                                                                               ------      <---------ANAC58                                                                         <-----      <---------ANAC58                                                                        <------     <------NtERF2                                                                            -------  <------ZmHOX2a(1)                                                                    <------MYB83 --------->ZAT2                                                                      <---------WOX13(1) <---------ZAT2                                                          --------->ANAC58     ------- ----------RAV1(2)                                                       --------->ANAC58    <------- ---->ANAC58                                          --------->LBD16    --------->ANAC46    <------- -ANAC58                                          ---------->CDC5   --------->LBD16 --------->ARR14(2) ---->ANAC58                                    <---------MYB59    <---------ANAC58 <---------GLK1(2) ---->ANAC46     --------->ARR11(3)             --------->AtMYB61  <---------ANAC58 <---------ARR14(2) -ANAC58     <---------ICU4            --------->MYB46(3)          <---------ANAC46 <------------CBF --->SPL7  <---------YAB1 ---------->DOF2      ----------------->AGL1  ---------->DOF2 <------MYB46(1)   gccaggaggcgttcttaatgaccttgtccaaagcagggataacaactcgacctaagcgggaatcgacttccgtagaagccattccagattggtagccgtg  337600                                                                                                  ===                                                                                                  ---                      <-----------------AGL3                                                   ======                      ------>ZmHOX2a(2)                                                        ------                      ================HOX2a_HOX2a                                             <------        --------->MYB46(3)                                                                  <-------- ----->HVH21         =================HOX2a_HOX2a                                           ------>NtERF2 ----MYB52(1)        <------ZmHOX2a(2)   <-----------ARR10                                 --------->DEAR3(1) -----HVH21         <---------AGP1       --------->GLK1(2)                              <---------ALFIN1 -->At5g28300       <---------ARR11(3)   --------->ARR14(2)                             --------->ANAC58 -->LBD16           --------->AGP1       <---------ARR14(2)                             --------->DEAR3(1) --ANAC58           --------->ARR11(3)   <---------ARR11(3)                             --------->ANAC58 --ANAC58  ------------>CBF    <------ZmHOX2a(1)                --------->MYB52(1)     >>>>>>>>>MYB2   acttcaacgaatcaccaatttagatctataagaggagagtgagtatctatctatgtagcccagagagaacggataacaacaacaagagcaacgcctcctc  337700        --------->WOX13(1)      ------------>CBF     <------ZmHOX2a(2) <---------------------WRI1                                            <---------O2 ===========HOX2a_HOX2a                                                <---------TGA1a --->ZmHOX2a(1)                                                   <---------At4g35610              <- ===========HOX2a_HOX2a                                           --------->At4g35610              <- >ZmHOX2a(1)---------->DOF2                                    ==================bZIP_DOF          <- ---ALFIN1<---------ATHB12           ----------->GT1           ---------->DOF2                ------- -ATERF1(1)--------->YAB1   <---------LBD16                   <---------REM1(1)     --------->AHL20(2)   ctctgcgatccaatcaaagcagtattcttatcagggagtcagtgaattacagacatctacgaagatgaagcagacgagacaaaaaaaaaaatggtgagct  337800                                                  ------>NtERF2                                                  <---------SPL7                                                  <---------RAP2.6(3)                                                  --------->ORA47(1)                                                  <-----------HVH21                                                 --------->DEAR3(1)                       <---------ARR14(2)     ====================HOX2a_HOX2a                       --------->ARR14(2)     ===============HOX2a_HOX2a              <---------AHL20(1)              ------>ZmHOX2a(2)              --------->AHL20(1)      --------->ARR14(2)         --------->MYB46(3)           <---------GLK1(2)         ------------>CBF  --------->LBD16   <---------GLK1(1)  <---------ZAT14      --------->GLK1(2)    --------->ARR14(2)  --------->ZAT14  --------->AHL20(2) <---------ARR14(2)  --------->ZAT18  --------->YAB1 <-----------------AGL2 --------ANAC46 --------->YAB1    <-----------------AG------>ZmHOX2a(1)                          ---- --------ANAC58<---------YAB1     <-----------------AGL3                                         <--- --------ANAC58<---------AHL20(2) ----------------->AGL2                 <---------ANAC46      <----- -->At4g35610 --------->AHL20(2)  ----------------->AGL3   ------>ZmHOX2a(1)       --------->TOE2(3)   tgagtgaagtaaccaatataataaaaatccgagagaaccagatttggatcgccgtcctctcctctatatgaaatgacttatatatccttgaatagtggcg  337900                                                                       <---------ZAT18                                                                       --------->ZAT14                                                               <---------SPL7                                                           <---------WRKY18(1)                                                          <---------ETT(2)                                                          --------->WRKY38(1)                                                          --------->ETT(2)                                                          --------->WRKY12                                                          ----------->HVH21       <-----------HVH21                                                        --------->At4g35610    --------->LBD16          <---------ARR14(2)                           <-----------RAV1(1)     <---------LBD16        --------->LBD16                             --------->ARR14(2) --------->ABI4(2)   <---------      <---------LBD16                               ------->TEIL  <---------LBD16--------->LBD16 ----->At5g28300          <------MYB83              <---------ARR14(2) <---------ZAT14   --------->At4g35610 ---NtERF2--------->ARR14(2)         <---------ICU4<---------CCA1(2)--------->LBD16--------->WRKY18(1) ----ANAC46               <------MYB46(1)    <---------ARR14(2)<-----------HVH21--------->LBD16   gtaatgtctccggatttgagggcatagttggtattttcaaaatgacgaattctgtatctgttgaccgtcccggtggactcccccggtcatgagctttcta  338000                     <----------DOF2                    <---------ANAC58                       --------->AHL20(2)                    <---------ANAC58                       <---------AHL20(2)              <---------AHL20(2)                        --------->ATHB12                           <-              <---------AHL20(1)                        <---------ICU4                             --              --------->AHL20(1)                       --------->ICU4                            ----              --------->AHL20(2)                       <---------ATHB12    ----------->GT1     <-----             <---------AHL20(2)                        <---------YAB1      <---------ANAC55(2) ------             --------->AHL20(2)           ----------->GT1 <---------WOX13(1)              <---------ANAC58         ------>ZmHOX2a(1)          <---------ZAT6 --------->ANAC58  --------->MYB46(3)   <---------ANAC46 -DOF2  --------->TOE2(3)      --------->YAB1      --------->ANAC58----------->RAV1(1)    <---------ANAC58   gcttatttatcctaaataaattgcttttggtaatagtagtgatatcgaaaaacacccatgattaattcccaacaaatatgtaaatttgttttgcgagtaa  338100  Previous    Next  AGI:  At1g01960.1    Description:  EDA10 (embryo sac development arrest 10); guanyl-nucleotide exchange factor. similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT3G60860.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G35380.1); similar to guanine nucleotide exchange family protein [Arabidopsis thaliana] (TAIR:AT4G38200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24490.1); similar to hypothetical protein OsI_010474 [Oryza sativa (indica cultivar-group)] (GB:EAY89241.1); similar to guanine nucleotide-exchange protein GEP2 [Oryza sativa] (GB:AAM00191.1); contains InterPro domain Armad Range:  from: 330588    to: 337582    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version