Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             --------->CCA1(2)                                                                          --------->ARR11(3)                                                                          --------->AGP1                                                            --------->MYB46(3)  --------->MYB46(3)             <---------ARR11(3)                           --------->MYB52(1)------>ZmHOX2a(2)             --------->ARR11(3)                          ------->GAMYB    >>>>>>>>>GATA-2            <---------CCA1(2)                           <---------MYB46(2)>>>>>>>>>GATA-3          --------->YAB1                           --------->ANAC58       >>>>>>>>>GATA-1         <-------TEIL                              --------->ANAC58      --------->GLK1(1)      --------->KAN4(1)                         ------->GAMYB       ---------->DOF2  <---------ARR11(3)      <---------HSFB2a(1)           <------ZmHOX2a(2)   <---------MYB111(1)<------ZmHOX2a(2)     <---------KAN4(2)             --------->ARR11(3)   <---------MYB52(2)>>>>>>>>>GATA-4   <------ZmHOX2a(1)               <---------ARR11(3)   --------->MYB46(3)<---------ARR11(3)   agtcaggaacattcatatctcattcaaagttttctaagatcaaaattcaaccctagcaactaacaactaataaagagatctaaccaatatcaattgaaac  270400                                                            <---------DEAR3(2)                                                            <---------MYB46(3)                                                         <---------WRKY18(1)                      <---------ARR14(2)        --------->HSFB2a(2)                      --------->ARR14(2)        <---------HSFB2a(2)                      <---------ARR11(3)       ------>ZmHOX2a(2)    --------->AHL20(2)                      --------->ARR11(3)   <---------YAB1------------>AtMYB77                     --------->RVE1(1)   --------->YAB1 ----------->HVH21  --------->ATHB12   --------->CCA1(1)  --------->ICU4  --------->WRKY12--------->AHL20(2)---------->DOF2   caagtgattgtaggctgtagcaaatatctgcgattcgaagcgatgatgatcgagaaggttgacggttcgatttattaaacacaaacaaaaaaaaaagaga  270500   gagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaga  270600                                                                                            <--------                                                                                           <---------ZAT14                                                                                          <---------ALFIN1                                                                                          --------->AtMYB61                                                                                         --------->bZIP60(2)                                                                                         --------->MYB46(3)                                                                                         --------->ANAC46                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                    --------->ANAC46                                                                                    --------->RAP2.6(2)                                                                               --------->ZAT14                                                                     --------->ANAC58  <---------ALFIN1                                                                     --------->ANAC58<---------ATERF1(1)                                                                  <---------SPL7   --------->ATERF1(1)                                                                <---------------AtSPL3 --------->ANAC46                               --------->ALFIN1                 --------------->AtSPL3<------NtERF2                               <---------MYB52(1)     <---------MYB46(3)       --------->At4g35610                              <-------GAMYB         <---------At4g35610       ------->GAMYB--------->ZAT14                      <------ZmHOX2a(2)             --------->At4g35610    ----------->RAV1(1)                    <------ZmHOX2a(1)  --------->HSFB2a(2)      <---------------AtSPL8--------->ATERF1(1)                  <---------TOE1(2)    <---------HSFB2a(2)     <------ZmHOX2a(1)  <---------ATERF1(1)   gagagagagagagaaactcacaggatcaagagcgttgggctctggaccgtaatcagcggttaagaggaagtacgatacaacagcagtcgccaccacactg  270700                                                                                                   --               <-----------------AGL1                                                           <----            <----------DOF2                       ---------->DOF2                             <------           <---------DAG2                       --------->LBD16                               -------       --------->MYB46(3)                      --------->HSFB2a(2)                           --------     --------->REM1(1)      <-------TEIL <---------ANAC58       <---------MYB52(1)           <-------  --------->TOE1(3)       <---------ARR14(2)   <---------HSFB2a(2)         *TSS          ------------  --------->TOE2(3)   <---------LBD16    <---------ANAC58      --------->LBD16       ----------->HVH21 -ALFIN1<---------ALFIN1  --------->ARR14(2)  <---------LBD16<---------LBD16       --------->ANAC55(2)   gttaccttcaccaccttttcaatttggggattcatcgatgttttcgttcccagaaagaacaattccggtgattttggtttttttcaagtgacacaatgat  270800                              --------->ANAC46                         --------->ANAC58    <-----------GT1      <----------ID1                               <---------ZAT18 --------->GT1           --------->ANAC46                          <---------ANAC58 -----YAB1               --------->ANAC58                      <---------MYB52(1)           --------- ---ICU4          ----------->GT1                             <---------RAP2.6(3)          ---------- -->YAB1       <------------CBF   --------->ARR14(2)         <---------ANAC58           <---------HSFB2a(2) ->ICU4       --------->ATHB12--------->ANAC58               <---------ANAC58        --------->TCP20 --ATHB12    <---------AHL20(2)------------>CBF              <---------ANAC46        <---------PCF2 >CBF        <---------YAB1   --------->ANAC58         <-------TEIL<---------ANAC58  --------->PCF2   gatgttatacgtttttttattggtaaaacgacacacaatccgatttgtgtaagaaaattcatgccgttttcgttcacttcaaatatgggcccagaaaggc  270900                                                    <---------WOX13(1)                                                    <----------DOF2                                              <---------ANAC46                                             ------>NtERF2                                          --------->ZAT2                                          <---------ZAT2                                          <---------At4g35610                                <-----------GT1<-------GAMYB                         <------NtERF2------>ZmHOX2a(2)                        ------>NtERF2<---------GLK1(1)                       <---------DEAR3(1) --------->At4g35610                    --------->ANAC46 <------ZmHOX2a(2)                    <-------GAMYB                  --------->MYB52(1)--------->ARR11(3)                   <---------MYB46(3)                 ------>ZmHOX2a(1)  <---------ARR11(3)                   <---------DEAR3(2)                 <---------REM1(2)  <---------ARR14(2)                   --------->MYB55(2)                 ----------->HVH21  --------->ARR14(2)                  <---------DEAR3(1)   --------->ARR11(3)  --------->DEAR3(1)--------->ANAC46             <---------RAP2.3(1)   <---------ARR11(3)  <---------ANAC46 <---------LBD16           <----------DOF2 ->DOF2          ============================HOX2a_HOX2a       ------>ZmHOX2a(2) >DOF2           ===========================HOX2a_HOX2a *TSS  <------ZmHOX2a(2)    --------->TOE2(3)-   ccaaacatctcatcaagtcctcacggcgtcgtttttaagatccccgctgcgttgatttatggcgatctctttcggcggttgaaaacctttgaaaattgaa  271000                                              <---------ZAT2                                              <---------At4g35610                                           ----------->RAV1(2)                                     <---------HSFB2a(1)                                     --------->HSFB2a(1)                                     <---------HSFC1(2)                                            <-                                    ------->TEIL                                                  <--                                    --------->SPL7                                                ---                                   --------->ARR14(2)                                         <------                                 --------->DEAR3(1)                                        <---------At4g35610                                 --------->MYB46(3)                                    ==============                     ------>NtERF2 ------>MYB83                                  <---------At4g35610                     <---------ATERF1(1)  ------>ZmHOX2a(1)                      --------->At4g35610                    --------->DEAR3(1)   <---------ALFIN1                     =======================                  ------>NtERF2  <---------MYB52(2)                           =======================                  <---------ATERF1(1)--------->HSFC1(2)                       ------>ZmHOX2a(1)  <---                  --------->LBD16<---------MYB46(2)                     --------->ANAC58   --------->At4g35610                 <---------DEAR3(1)------>MYB46(1)               --------->HSFB2a(2)   ==============            --------->AtMYB61   --------->ANAC58          <---------CCA1(2)  <---------ALFIN1 -------     --------->GLK1(1)      <-----------HVH21------>ZmHOX2a(1)   <---------HSFB2a(2)   ------>ZmHOX2a(1) ---------->GT1 <---------LBD16 --------->ANAC58 <---------At4g35610    --------->ANAC58 --------->REM1(1)   aatggagaaatcgacctctccggcgactcgagtcaccgaacctcctcctgctgctacttcatctcttccagcacaagctcctccgcttcctacatctgca  271100           --------------------->WRI1         ----------->RAV1(2)         --------->At4g35610         --------->ZAT2         <---------At4g35610         <---------ZAT2       <-----------RAV1(2)                                 ------------>AtMYB77      <------ZmHOX2a(2)                                   --------->ETT(2)     <---------ARR11(3)                              <---------ATERF1(1)     --------->ARR11(3)                              ------>NtERF2    <---------GLK1(1)                               --------->DEAR3(1)    --------->GLK1(1)                              --------->ATERF1(1)               --------->LBD16 -----ZmHOX2a(2)                       <-----------RAV1(2)<---------ETT(2)         <-----------RAV1(2) -------ARR14(2)                    <---------At4g35610   ----------->HVH21     <---------SPL7 ------>ARR14(2)                    --------->ZAT2<---------ATERF1(1)      <-------TEIL ---At4g35610                       --------->At4g35610 --------->LBD16    ------>ZmHOX2a(2) ============HOX2a_HOX2a   <---------ZAT2--------->At4g35610              <------ZmHOX2a(2) =====HOX2a_HOX2a          --------->At4g35610    ------>NtERF2          <---------GLK1(2) ============HOX2a_HOX2a   --------->ZAT2<---------At4g35610             --------->ARR14(2) ------At4g35610           <---------At4g35610<---------RAP2.3(3)        --------->AGP1 =====HOX2a_HOX2a       ----------->RAV1(2)----------->HVH21   <-------GAMYB <-----------HVH21     -- -->At4g35610   <-----------GT1     <---------ZAT2<---------RAP2.3(1)    <---------ARR14(2) ---------   gatcagagatcagctgagttaccttcgcctgctcagccagctcagatgactgcgcctccgtcgacagttaccacagatccgtcgtccaggggaagaaagc  271200                           <---------At4g35610                           --------->At4g35610                     <------ZmHOX2a(2)                           ------>ZmHOX2a(2)                    --------->AGP1                              <------ZmHOX2a(2)                    <---------ARR14(2)                         <---------ARR14(2)            <---------ARR14(2)                                 <---------ARR11(3)               <----            <-----------ARR10                                  --------->ARR11(3)               -----            --------->ARR14(2)                                 --------->AGP1                  <-----            ------->TEIL   --------->GLK1(1)                   <---------ARR14(3)        <------MYB83            --------->GLK1(2)                  <---------ANAC58<-----------ARR10         <------MYB46(1)            <---------ARR11(1)                 <---------ANAC58--------->ARR14(2)      <--------P  --           <---------ARR14(1)     <---------MYB111(1)          --------->ARR14(3)--------->HSFB2a(2) ------->ZAT18      --------->ARR14(2)        <-------TEIL ---------->DOF2       <---------HSFB2a(2) ->DOF2    <---------CCA1(2)      --------->MYB46(3)    <-----------HVH21 <---------ALFIN1     ------   gagcgctggaagcgaatcttcagatcgagagctccaactactacaagatgcgtctccttgtcaaagatcttcgccctcacgttctcgaggttggaccata  271300  Previous    Next  AGI:  At1g01725.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39583.1) Range:  from: 269792    to: 270775    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g01730.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO39582.1) Range:  from: 270956    to: 272061    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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