Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               ------->TEIL                          <---------YAB1                       <---------SPL7                                                           <----                  --------->WRKY38(1)                                                           -----                  --------->WRKY12                                                          ---------                 --------->ALFIN1                                                           -------->HAHB4 ----------DOF2  --------->ATERF1(1)                                             --------->ANAC46   < ------ARR11(3)  <------NtERF2                                                   --------->ANAC58<--- ----->ARR11(3)<---------ANAC58                            <---------TOE2(3)     --------->ANAC58<--- ------AHL20(1)<---------ANAC46                        --------->YAB1        <-----------GT1<-------- -YAB1         <---------ANAC58    --------->YAB1      <---------ICU4  <---------YAB1      <---------ATHB12 --GT1         --------->ALFIN1   <---------YAB1 ----------->GT1     ----------->GT1       --------->ICU4   atctttttttgttagaggcgtggaccgtatgaatgtatgatagtatagaaatagaaataataacgttggcattgttatttaacaagcaaacaaatgatta  228600                                                                       <---------MYB52(1)   <---------WOX13(1)                                                <---------------AtSPL8 --------->ATHB12                           <-----------GT1         <---------ANAC46 -----TOE2(3)                        <---------AHL20(2)            <---------ZAT2 ---->MYB59                <-------TEIL  <---------ICU4            --------->ZAT2<------MYB46(1) >ATHB12          --------->ICU4     <---------YAB1                <---------At4g35610 -------TEIL      <---------ATHB12  --------->AHL20(2)         --------->ANAC46  <------MYB83 ------- ---MYB83    --------->ANAC46       <---------AHL20(2)         --------->ANAC55(2)  <-------TEIL----- ---MYB46(1) --------->ANAC58      --------->YAB1             ------->TEIL      <---------------AtSPL8 -ICU4       --------->ANAC58    ------->TEIL      <----------DOF2------->TEIL  --------->MYB111(1)   ggttgattgatgaacaagcaatgactaggttgatgaattttaattgttactgactttgtctgtgtacgtagctggtacttagttggtacatgcctatcaa  228700                                      <---------ANAC58                                      <---------ANAC46                           --------->AGP1                           <---------ARR11(3)                           <---------GLK1(2)                           <---------ARR14(2)                         <---------ARR11(3)                           --------->ARR14(2)                         --------->AHL20(2)                           --------->ARR11(3)                         --------->AHL20(1)                          <---------GLK1(1)                 --------->CCA1(2)                          --------->GLK1(1)                 --------->ARR14(1)                         ----------->ARR10                 <---------ARR14(2)                       <---------At4g35610                 --------->ARR11(1)          <---------AHL20(2)     --------->ATHB12          --------->ARR14(2)          --------->AHL20(1)   ------>ZmHOX2a(1) <-------MYC3    <------ZmHOX2a(2)          <---------AHL20(1) ------>ZmHOX2a(2)   ------->MYC3<-------TEIL<---------AHL20(2) -->YAB1  --------->ARR11(3)<------ZmHOX2a(2)<-------TEIL<---------------AtSPL8   ----------->GT1 ----->DOF2        <---------MYB52(2) <---------ANAC58 ---------->DOF2<---------AHL20(1)   aagaaaaactaatattttgcaacgaagcagatccttcattgcttacatacatgtggaaaaagatacgatcaatattttaaaaaatcgtgaattgaatttt  228800                                    --------->At4g35610                                    <---------PCF2                                  <---------DEAR3(1)                               <---------ANAC58                               ============================bZIP_DOF                               <---------ANAC58                               <---------bZIP60(2)                               <---------ANAC46                               <---------O2                            ----------->TGA1                            ----------->HVH21                          --------->At4g35610                       <---------HSFC1(2)                      --------->ANAC58                                    <----------DOF2                      --------->ANAC58                                 <---------ALFIN1              ----------->RAV1(1)--------->ALFIN1                   <---------WRKY38(1)             --------->ANAC46  --------->TGA1a                      <---------WRKY12             --------->ANAC58  --------->O2              <---------At4g35610                       --             ----------->HVH21 <---------TGA1a           --------->At4g35610                     <---             --------->ANAC58<---------TGA2(2)  ---------->DOF2    --------->WRKY18(1)      ---------       --------->ANAC46--------->HSFC1(2)   --------->ZAT6       --------->WOX13(1)       <---------WOX13(1)   gttttatacacacagacgacagacaagcttctgacgtgggctcaaaacactaaaacggcctctgaatcagtcaacactttgaggcatgagagattgatta  228900                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                             ------>NtERF2                                                                                            ---------   --------->DEAR3(1)   <---------ATHB12                                                   <------NtERF2 ------->MYB46(3)--------->ANAC46                 <---------ICU4  <---------AHL20(2)     <---------ANAC46 --------GT1     <----------ID1                --------->YAB1     <---------YAB1        --------->ALFIN1 >ATHB12     <----------DOF2       ------------>CBF    ------------>CBF          ------>ZmHOX2a(1)   aaccacagaccaagtctttacgacaaatcaactcgagcccaataggctctaataaggcccaatacgatataatcgtcttcttcctgtagagtcggggacc  229000                                                         <------NtERF2                                                        ------>NtERF2                                                       --------->RAP2.3(3)           --------->AHL20(2)                          --------->DEAR3(1)      ------------>CBF                                 --------->RAP2.3(2) ---->TOE1(2)                                 <------MYB46(1)                     <----------DOF2 ----ZAT2  <---------AHL20(2)                 <------MYB83                     <---------ALFIN1 --->ZAT2 <---------ATHB12                   <---------MYB46(3)            --------->At4g35610 -->ARR14(2)                              <---------MYB46(3)            --------->At4g35610  -------- ---ARR14(2) *TSS                         --------->MYB111(1)        ---------->DOF2  <---------AtLEC2 -->HVH21 --------->AHL20(2)     <------ZmHOX2a(1)   <---------ATERF1(1)<---------At4g35610 <--------   tgggattagtcaataaatgagtagaatttttgtaaggaagagagtagttggtgagcgtcgccattgaaggggaaagcagcccaactttgcattgaatgac  229100                                                                                      ----------->HVH21                                                                                  <------NtERF2                                                                                <---------MYB46(3)                                                                                <---------DEAR3(1)                                                                           ------>ZmHOX2a(2)                                                                           ========================HOX2a_HOX2a                                                                          --------->ARR14(1)                                                                          <------ZmHOX2a(2)                                                                          --------->CCA1(2)                   --------->ZAT2                                         =========================HOX2a_HOX2a                   <---------ZAT2                                        --------->ARR14(3)                   <---------At4g35610                                   <-----------ARR10                   --------->At4g35610                                   <---------ARR14(2)       ---                <---------At4g35610        ------>ZmHOX2a(1)             --------->AGP1           ---                <---------ZAT2          <------ZmHOX2a(2)                <---------AGP1  <-----------RAV1(2)    <---------ARR11(3)               =============HOX2a_HOX2a            --------->ARR11(3)       ---    --------->ARR11(3)           <---------YAB1                          <---------ARR11(3)       --- --->HVH21      --------->ZAT2 --------->YAB1    <----------DOF2         <---------ARR14(3)       <-- -WOX13(1)      --------->At4g35610  ------>ZmHOX2a(2)                   --------->ARR14(2) <------ZmHOX2a(1)   acttaaaatctttctctcagcagctgtcttcatttatgatcgatcctacttctttcttctctctaccaatttcaagatctggtcgtcgctcacaggagaa  229200                                         --------->At4g35610                                         ----------->RAV1(2)                                         --------->ZAT2                                   <---------At4g35610                                   --------->At4g35610                                   --------->ZAT2                                  =================RAV             ------>ZmHOX2a(2)                                  ===================RAV       --------->WRKY12                                --------->At4g35610            --------->WRKY38(1)                  -                                --------->ZAT2                <---------MYB52(1)                   <-                         --------->ANAC58<---------ZAT2--------->HSFB2a(1)                        <--                         --------->ANAC58<---------At4g35610 <-------GAMYB                        ---           ---------->DOF2     --------->ANAC46  ---------->DOF2   =========================HOX2a_HOX2a --------->MYB52(1)  --------->ANAC58  <-----------RAV1(2)  <---------ANAC58                  <------ ------>ANAC58       --------->AtLEC2 <---------At4g35610   <---------ANAC46             ---------->DOF2 ------>ANAC58       --------->ANAC58 --------->At4g35610   <---------ANAC58         ================ ------>ANAC55(2)    --------->ANAC46----------->RAV1(1) <---------MYB52(1)          <------ZmHOX2a(1) ------>ANAC55(1)    ------>MYB83 ----------->RAV1(1)  <---------HSFB2a(1)    <------ZmHOX2a(2) <---- -------ANAC55(2)    ------>MYB46(1) ================RAV<---------SPL7        ==============HOX2a_HOX2a   acgtaatggaaaacaaagagaccaagcaagaaccagcagcagcagctgagcaaaagaccgttccgttgatcgaagatgagatcgagaggagcaaagtcgg  229300                              ------>ZmHOX2a(1)                              --------->LBD16                            ------>ZmHOX2a(2)                           <------ZmHOX2a(2)                          --------->ARR11(3)                          --------->AGP1                          <---------ARR14(3)                          <---------GLK1(2)                          <---------ARR14(2)                          <---------ARR11(3)       --------->At4g35610--------->ARR14(2)       <---------At4g35610--------->ARR14(3)  <---------YAB1        ----------->ARR10 -------->YAB1     ------->GAMYB -----ZmHOX2a(2)   --------->At1g77200 -------ARR11(3)   --------->DREB2C(2) ------>ARR11(3)  --------->DEAR3(2) ---LBD16         --------->MYB46(3)                              ---------->DOF2         --------->ATHB12 =====HOX2a_HOX2a --------->SPL7      <---------TOE2(3)    ----------->GT1               --------->ICU4 --NtERF2      ----------->HVH21   <---------MYB52(2)  <----------DOF2            ---------->DOF2  --   gatcatgagagctctctgcgaccgacaagatcctgaaactaaggtccctatcgatttctttaagtaaaaaaagaattcaaccagaaaagtattgatttga  229400                                     ------>ZmHOX2a(2)                                     ==================HOX2a_HOX2a                              <---------MYB46(3)                 --------->ARR14(2)--------->ARR11(3)                <---------ANAC46          <---------ICU4     --------->ALFIN1                        <---------bZIP60(2)          --------->ATHB12--------->ALFIN1                        ----------->HVH21         --------->ICU4   <---------AtMYB61     <------ZmHOX2a(1)<-----------HVH21         <---------ATHB12===================HOX2a_HOX2a         <---------ANAC58         <---------YAB1  <------ZmHOX2a(1)--------->YAB1        <---------ANAC58 ---------->DOF2<----      --------->ICU4  <-----------RAV1(2)<---------YAB1         <---------ANAC55(2)             ----- -------->DOF2   <---------ARR14(2)<---------ARR11(3)           --------->ANAC55(2)--------->DAG2   taaaagccctaatgatttggatttgcaggaggtggatgatctgatgataaggaggtttctgagagcgcgtgacctggacattgaaaaggcttcaacgatg  229500  Previous    Next  AGI:  At1g01630.1    Description:  SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G14820.3); similar to unknown [Populus trichocarpa] (GB:ABK93168.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol transfer protein-like, N-terminal (InterPro:IPR011074) Range:  from: 229013    to: 230917    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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