Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <------NtERF2                                                                                        ------>NtERF2                                                                                    --------->ANAC46                                                                  <---------ETT(2)  --------->ANAC58                                                             --------->ZAT14        --------->ANAC58                                                             <---------ZAT14     <------ZmHOX2a(2)                                                             <---------ZAT18    <---------ARR11(3)                                                        <---------At4g35610     --------->ARR11(3)  - ------->DOF2                   --------->AHL20(2)      --------->At4g35610    --------->YAB1       - ---->MYB46(3)           ----------->GT1           --------->GLK1(2)          --------->ICU4        - ---->RAV1(1)           ----------->GT1 <-------GAMYB <---------HSFB2a(2)   ---------->DOF2 ---------   aaaagaccaattctacttgtattaagaagataaaaaaaatggggttaccagagattccagcagtacagtagacaagggcaaagatcatgccaccgaaagc  226900                                        --------->ZAT18                                        <---------ZAT18                                        --------->ZAT14                                     <------MYB83                                     <------MYB46(1)                                     <---------ANAC58                                    <---------MYB46(3)                                    --------->MYB111(2)                                    --------->MYB46(2)                                    <---------AtMYB61                                 --------->ATHB12        <---------ANAC46       ------->MYC3                                                 ---------        <---------ANAC58       <-------MYC3                               <---------ANAC55(2) <---------ATHB12           --------->ANAC58                 <-----------HVH21            <------MYB83 -------->ANAC58            --------->ANAC58   --------->ZAT14         <---------MYB52(1)<---------AtMYB61 -------->ANAC58     ------->GAMYB  --------->MYB111(1)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <------NtERF2 -------->ANAC46  ----------->RAV1(1)<---------ANAC58   <---------ATHB12  <---------ANAC46<------MYB46(1) ->DOF2 <---------ANAC58    <---------ALFIN1   <---------ZAT14       <---------ZAT6    <------ZmHOX2a(1)   ccaagcaatgccttggattccaacagaggcacacatgtttggtgctctcttcactcccatcactgtcaatactgttatgtatagaaacaggaaggtggct  227000                                                                         --------->ATERF1(1)                                                                         <------NtERF2                --------->ARR14(2)                                      <---------MYB46(3)                <---------ARR14(2)                  --------->ANAC58    <---------ATERF1(1)              --------->LBD16              --------->ANAC58          <---------MYB46(3)              ------>NtERF2                --------->ANAC58      --------->ALFIN1            <---------LBD16             --------->At4g35610    <---------At4g35610          --------->GLK1(2)             <---------At4g35610    <---------ZAT2   --------->REM1(2)          --------->ARR14(2)            <---------ZAT2         --------->At4g35610      <------NtERF2                     --------->ZAT2         --------->ZAT2<---------ANAC46    <---------DEAR3(1)     <------ZmHOX2a(1) ----------->RAV1(2) <---------MYB46(3) ------->TEIL<---------RAP2.6(2)--------->ANAC58    ----------->GT1 <---------AtMYB61              <- >ALFIN1  <---------ARR14(2)    --------->ANAC58    --------->ANAC58--------->ALFIN1          -------   atgaactcggcgattccggctctgtagaaggaccacgaactcagctcgcctggctcgaaaaatggagctggtggtggctccttgtagtctttgtccgtct  227100                          --------->LBD16                          <---------HSFB2a(2)                         <---------LBD16                   <---------ANAC58                   <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                <---------MYB52(1)           --------->MYB52(1)                      <---------HSFB2a(1)                    <-------TEIL           ------>MYB83 <---------LBD16 --------->PCF2  ------>ZmHOX2a(1)       --------->HSFB2a(2)           ------>MYB46(1)--------->HSFB2a(2)      --------->HSFB2a(1)    ===========================       ------->TEIL<---------ANAC58   --------->At4g35610                 <---------------AGL15 --------At4g35610 ----------------->AGL1  <---------ALFIN1               --------------->AGL15   <-- ---->RAV1(2) <---------MYB46(3)      <---------At4g35610    <----------DOF2    <---------HSFB2a(2) <   gagccgatgtacctatcggttgcctctccgggaacttgttagctcccactcgaacatcctcttctttcccttccatctctatctagaaaacgttcaagtg  227200                     <<<<<<<<<<<<<<<<<LFY                     <---------------AGL15          <-----------GT1     <----------DOF2 --------------->AGL15     <---------DAG2 <-----------------AG<---------MYB46(3)    <---------ANAC58<-----------------AGL2                                                      -----    <---------ANAC58<-----------------AGL1<---------ANAC46                                      ----- ====================================MADS_MADS                                                  ----- ----------------------ANAC81          --------->ALFIN1     ----------->GT1                    ------ ----------DOF2 <----------DOF2   --------->YAB1     ---------->DOF2                          -------   ttctttgctttttttcttcttttctacaatgggtaatgagagtggctgagatagagaaagaatggttttatagaggcgagagagagagagaatagaaaaa  227300                                         --------->YAB1                                <---------AHL20(2)                               <---------AHL20(1)                               --------->AHL20(1)                               --------->ARR11(3)                                  ---------->DOF2                               <---------ARR11(3)                   <---------TOE2(3)  *TSS <---------MYB52(2)   --------->YAB1  --------->YAB1         <---------DOF5.7(2)              - ---->ANAC58             --------->YAB1 <---------AHL20(2)         --------->MYB52(1)               - ------>GT1             <---------YAB1  <---------ATHB51    --------->ATHB12------>ZmHOX2a(2)     <-- ---->ANAC58   --------->HSFB2a(2)  <---------AHL20(2)      --------->YAB1<---------ARR11(3)     <--- --->DAG2      <---------HSFB2a(2)  --------->AHL20(2)--------->ANAC46    --------->ARR11(3) -------- --->DOF2--------->MYB52(1)<---------YAB1<---------ICU4    --------->ICU4 <-----------ARR10  <-------   gcaaaaaaaactaacgtctcgaaactattatgatatatttaaataatgagaaatacagggaatcatggataacgatgatcttcgtaaaagcatatttatt  227400         --------->YAB1      <--------ATHB1      -------->HAHB4      --------->ATHB51      --------->YAB1      <---------ICU4                                 ------->GAMYB     --------->ICU4                                --------->ANAC46     <---------ATHB51                              --------->ANAC58             <---------MYB46(3)     <---------YAB1                       <---------ANAC55(2)                  --------->WRKY38(1)     <---------AHL20(2)                   --------->ANAC55(2)                 <---------MYB52(1) <---   --------->YAB1                         ----------->GT1                    <-------GAMYB       <--- -------->TOE1(3)                       --------->YAB1                      <---------ANAC58     ---- -------->TOE2(3)                       <---------ICU4  --------->ANAC58    <---------ANAC58    ----- -------TOE2(3)                        <---------ATHB12 --------->ANAC58    <---------ANAC46   <----- --------GT1                        <---------AHL20(2)<---------ALFIN1   <---------MYB52(1)  <------- ->AHL20(2)                     ----------->GT1    --------->ANAC58     <-------GAMYB    <---------YAB1 --AHL20(2)<---------YAB1       <---------YAB1 --------->ZAT6          <-----------RAV1(1)  <--------   tacgttaataattgtaatagcctactacttgatgatgtttaatcatgtaacacaacccacgcttatactaattctgttgcgttggctaactattagtatt  227500                                        <---------AHL20(2)                                       --------->AHL20(1) ------AHL20(1)                        <---------AHL20(2) ------AHL20(2)                        <---------AHL20(1)                                 ----------- ----->AHL20(1)   <---------YAB1       --------->AHL20(2)                          <<<<<<<<<MYB2 ---->YAB1      ---------->DOF2     ------>MYB46(1)            <------ZmHOX2a(1)   <<<<<<<<<MYB1 ----YAB1   ------>ZmHOX2a(1)  <---------WRKY18(1)          <-----------RAV1(2)--------->At4g35610 --ZAT6    --------------->AGL15    ------>MYB83     <---------ANAC58          <---------At4g35610 -YAB1    ----------------->AGL3  <---------MYB59    <---------ANAC58      <-----------HVH21      ---   atattctgaaactccttataaagatagcatgtttgacctaatttattctcaaatgccttgctacaggagtactactcagtcagcagttagaaatgtaaaa  227600                                                                      ----------->HVH21                                                                      <---------ETT(1)                                                                <-----------GT1                                                            <---------ICU4                                                            --------->ATHB51             <---------HSFB2a(2)                            <---------AHL20(2)             --------->HSFB2a(2)                            <--------ATHB1      <---------At5g28300                                   --------->AHL20(2)  <---------ICU4                                           --------->ICU4             ---------->DOF2 <---------AHL20(1)                 <----------DOF2      --------->YAB1        <---------HSFB2a(2) --------->AHL20(1)                 <---------DAG2      <---------AHL20(2)  <---------MYB52(1)     -- >GT1<-----------GT1         <------ZmHOX2a(1)         --------->AHL20(2)  <-------GAMYB <----------ID1 ------>AHL20(2)         ---------->DOF2 <-----------GT1--------->AHL20(2)<---------MYB46(3)---------   aaaaatattacagtgccagaaaactcacaaaggactaactttttgactagtcgacgaattaataatttacttccgaccgttggagaagaaaaggaaaaga  227700                                                                                              -------                                                                                      <-----------GT1                                                                                  --------->AHL20(2)                                                      ------>NtERF2               --------->AHL20(1)                                                    --------->LBD16               <---------AHL20(2)                              >>>>>>>>>MYB98        ------>NtERF2                <---------AHL20(2)                          ----------->GT1          <---------ANAC58              --------->AHL20(2)      ---------->DOF2   ---------->DOF2            <---------ANAC58          --------->AHL20(2) <---------ANAC46<---------DAG2                    <---------ANAC46          <---------AHL20(2) --------->ALFIN1<----------DOF2                  <---------LBD16         ----------->GT1     <------ ------->ALFIN1 <---------ANAC58      --------->HSFB2a(2)                ----------->GT1      ------- ->DOF2         <---------ANAC58      <---------HSFB2a(2)            <---------AHL20(2)       <------   agtgtgtggaaagcgattgctttatgtaaagtaacatagtctcgaacattgtgccgggcctagagtatttttaaaatgtttaattaaattactatgtgta  227800  Previous    Next  AGI:  At1g01620.1    Description:  PIP1C (PLASMA MEMBRANE INTRINSIC PROTEIN 1;3); water channel. Identical to Aquaporin PIP1-3 (PIP1-3) [Arabidopsis Thaliana] (GB:Q08733;GB:Q8W4E5); similar to TMP-C (PLASMA MEMBRANE INTRINSIC PROTEIN 1,4), water channel [Arabidopsis thaliana] (TAIR:AT4G00430.1); similar to trans-membrane water channel protein [Brassica juncea] (GB:ABO71659.2); contains InterPro domain Aquaporin; (InterPro:IPR012269); contains InterPro domain Major intrinsic protein; (InterPro:IPR000425) Range:  from: 225665    to: 227302    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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